RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 ZNRF1Q8ND25 227 aa12.96□□□□□ -0.34
DHFR-201ENST00000439211 TEPPQ6URK8 271 aa12.95□□□□□ -0.34
DHFR-201ENST00000439211 NUP35Q8NFH5 326 aa12.95□□□□□ -0.34
DHFR-201ENST00000439211 OPRK1P41145 380 aa12.95□□□□□ -0.34
DHFR-201ENST00000439211 UBE2L3P68036 154 aaKnown RBP12.95□□□□□ -0.34
DHFR-201ENST00000439211 INO80CQ6PI98 192 aaPredicted RBP12.95□□□□□ -0.34
DHFR-201ENST00000439211 MIR17HGQ75NE6 70 aa12.95□□□□□ -0.34
DHFR-201ENST00000439211 AP5S1Q9NUS5 200 aa12.95□□□□□ -0.34
DHFR-201ENST00000439211 ZNF146Q15072 292 aa12.95□□□□□ -0.34
DHFR-201ENST00000439211 RNFT1Q5M7Z0 435 aa12.95□□□□□ -0.34
DHFR-201ENST00000439211 LINC00473A8K010 186 aa12.94□□□□□ -0.34
DHFR-201ENST00000439211 A8MWL6 223 aa12.94□□□□□ -0.34
DHFR-201ENST00000439211 HBBP68871 147 aa12.94□□□□□ -0.34
DHFR-201ENST00000439211 BOD1L2Q8IYS8 172 aa12.94□□□□□ -0.34
DHFR-201ENST00000439211 LOC389332A0A1B0GUA5 103 aa12.94□□□□□ -0.34
DHFR-201ENST00000439211 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.94□□□□□ -0.34
DHFR-201ENST00000439211 ACP7Q6ZNF0 438 aa12.94□□□□□ -0.34
DHFR-201ENST00000439211 MOGAT3Q86VF5 341 aa12.94□□□□□ -0.34
DHFR-201ENST00000439211 TEX45Q8NA69 505 aa12.94□□□□□ -0.34
DHFR-201ENST00000439211 OR52E5Q8NH55 327 aa12.94□□□□□ -0.34
DHFR-201ENST00000439211 FAM168AQ92567 244 aa12.94□□□□□ -0.34
DHFR-201ENST00000439211 NKX2-8O15522 239 aa12.94□□□□□ -0.34
DHFR-201ENST00000439211 APOMO95445 188 aa12.94□□□□□ -0.34
DHFR-201ENST00000439211 FCGR2BP31994 310 aaPredicted RBP12.94□□□□□ -0.34
DHFR-201ENST00000439211 EFNB3Q15768 340 aa12.94□□□□□ -0.34
DHFR-201ENST00000439211 ANXA2RQ3ZCQ2 193 aa12.94□□□□□ -0.34
DHFR-201ENST00000439211 SLC35E4Q6ICL7 350 aa12.94□□□□□ -0.34
DHFR-201ENST00000439211 LY96Q9Y6Y9 160 aa12.94□□□□□ -0.34
DHFR-201ENST00000439211 MZT1Q08AG7 82 aa12.94□□□□□ -0.34
DHFR-201ENST00000439211 FAM201AQ5SY85 155 aa12.94□□□□□ -0.34
DHFR-201ENST00000439211 VGLL1Q99990 258 aa12.93□□□□□ -0.34
DHFR-201ENST00000439211 IGLV2-14P01704 120 aa12.93□□□□□ -0.34
DHFR-201ENST00000439211 OR9G9P0C7N8 305 aa12.93□□□□□ -0.34
DHFR-201ENST00000439211 FAM87AP0C7U9 286 aa12.93□□□□□ -0.34
DHFR-201ENST00000439211 GAGE13Q4V321 117 aa12.93□□□□□ -0.34
DHFR-201ENST00000439211 TCTEX1D4Q5JR98 221 aa12.93□□□□□ -0.34
DHFR-201ENST00000439211 BCL6BQ8N143 479 aaPredicted RBP12.93□□□□□ -0.34
DHFR-201ENST00000439211 OR4X2Q8NGF9 303 aa12.93□□□□□ -0.34
DHFR-201ENST00000439211 RNF183Q96D59 192 aa12.93□□□□□ -0.34
DHFR-201ENST00000439211 PROCRQ9UNN8 238 aa12.93□□□□□ -0.34
DHFR-201ENST00000439211 UFC1Q9Y3C8 167 aa12.93□□□□□ -0.34
DHFR-201ENST00000439211 INTS1Q8N201 2190 aaKnown RBP12.93□□□□□ -0.34
DHFR-201ENST00000439211 TREML4Q6UXN2 200 aa12.93□□□□□ -0.34
DHFR-201ENST00000439211 ZADH2Q8N4Q0 377 aa12.93□□□□□ -0.34
DHFR-201ENST00000439211 GGTLC1Q9BX51 225 aa12.93□□□□□ -0.34
DHFR-201ENST00000439211 NEU4Q8WWR8 484 aaPredicted RBP12.92□□□□□ -0.34
DHFR-201ENST00000439211 H1FXQ92522 213 aaKnown RBP12.92□□□□□ -0.34
DHFR-201ENST00000439211 CHCHD1Q96BP2 118 aaKnown RBP12.92□□□□□ -0.34
DHFR-201ENST00000439211 COQ2Q96H96 371 aa12.92□□□□□ -0.34
DHFR-201ENST00000439211 WNK2Q9Y3S1 2297 aa12.92□□□□□ -0.34
DHFR-201ENST00000439211 TNCP24821 2201 aa12.92□□□□□ -0.34
DHFR-201ENST00000439211 H3BMG7 143 aa12.92□□□□□ -0.34
DHFR-201ENST00000439211 APOHP02749 345 aaPredicted RBP12.92□□□□□ -0.34
DHFR-201ENST00000439211 FOXF2Q12947 444 aa12.92□□□□□ -0.34
DHFR-201ENST00000439211 SYT8Q8NBV8 401 aa12.92□□□□□ -0.34
DHFR-201ENST00000439211 SNRNP40Q96DI7 357 aaKnown RBP12.92□□□□□ -0.34
DHFR-201ENST00000439211 LINC00479Q96M42 142 aa12.92□□□□□ -0.34
DHFR-201ENST00000439211 TMUB1Q9BVT8 246 aa12.92□□□□□ -0.34
DHFR-201ENST00000439211 CECR9P0C854 216 aa12.92□□□□□ -0.34
DHFR-201ENST00000439211 IQCF6A8MYZ5 107 aa12.91□□□□□ -0.34
DHFR-201ENST00000439211 AMTNQ6UX39 209 aa12.91□□□□□ -0.34
DHFR-201ENST00000439211 GRAMD2BQ96HH9 432 aa12.91□□□□□ -0.34
DHFR-201ENST00000439211 TMEM140Q9NV12 185 aa12.91□□□□□ -0.34
DHFR-201ENST00000439211 NCKAP5O14513 1909 aa12.91□□□□□ -0.34
DHFR-201ENST00000439211 NPIPB11E5RHQ5 1161 aa12.91□□□□□ -0.34
DHFR-201ENST00000439211 FAM169BQ8N8A8 192 aa12.91□□□□□ -0.34
DHFR-201ENST00000439211 K7ERJ3 54 aa12.91□□□□□ -0.34
DHFR-201ENST00000439211 PPIFP30405 207 aaKnown RBP12.91□□□□□ -0.34
DHFR-201ENST00000439211 GAGE5Q13069 117 aa12.91□□□□□ -0.34
DHFR-201ENST00000439211 GAGE6Q13070 117 aa12.91□□□□□ -0.34
DHFR-201ENST00000439211 TMEM249Q2WGJ8 235 aa12.91□□□□□ -0.34
DHFR-201ENST00000439211 ZNF479Q96JC4 524 aa12.91□□□□□ -0.34
DHFR-201ENST00000439211 TECTAO75443 2155 aa12.9□□□□□ -0.34
DHFR-201ENST00000439211 P01737 135 aa12.9□□□□□ -0.34
DHFR-201ENST00000439211 SP9P0CG40 484 aa12.9□□□□□ -0.34
DHFR-201ENST00000439211 DEFB109BQ30KR1 87 aa12.9□□□□□ -0.34
DHFR-201ENST00000439211 Q6ZT83 130 aa12.9□□□□□ -0.34
DHFR-201ENST00000439211 OR9G4Q8NGQ1 327 aa12.9□□□□□ -0.34
DHFR-201ENST00000439211 MGST2Q99735 147 aa12.9□□□□□ -0.34
DHFR-201ENST00000439211 SPAG8Q99932 426 aaPredicted RBP12.9□□□□□ -0.34
DHFR-201ENST00000439211 AMMECR1Q9Y4X0 333 aaPredicted RBP12.9□□□□□ -0.34
DHFR-201ENST00000439211 BDP1A6H8Y1 2624 aa12.9□□□□□ -0.34
DHFR-201ENST00000439211 HES4Q9HCC6 221 aa12.9□□□□□ -0.34
DHFR-201ENST00000439211 WDFY3Q8IZQ1 3526 aa12.9□□□□□ -0.34
DHFR-201ENST00000439211 TCF19Q9Y242 345 aa12.9□□□□□ -0.34
DHFR-201ENST00000439211 SMIM27A0A1W2PRY6 76 aa12.89□□□□□ -0.35
DHFR-201ENST00000439211 ERVK11-1P61568 191 aa12.89□□□□□ -0.35
DHFR-201ENST00000439211 CACNG7P62955 275 aa12.89□□□□□ -0.35
DHFR-201ENST00000439211 TEX29Q8N6K0 151 aa12.89□□□□□ -0.35
DHFR-201ENST00000439211 RND1Q92730 232 aa12.89□□□□□ -0.35
DHFR-201ENST00000439211 TRAV3A0A0B4J244 114 aa12.89□□□□□ -0.35
DHFR-201ENST00000439211 SMAD7O15105 426 aaKnown RBP12.89□□□□□ -0.35
DHFR-201ENST00000439211 DEFB124Q8NES8 71 aa12.89□□□□□ -0.35
DHFR-201ENST00000439211 NABP2Q9BQ15 211 aa12.89□□□□□ -0.35
DHFR-201ENST00000439211 SLC25A5P05141 298 aaKnown RBP12.88□□□□□ -0.35
DHFR-201ENST00000439211 WFDC3Q8IUB2 231 aa12.88□□□□□ -0.35
DHFR-201ENST00000439211 FDCSPQ8NFU4 85 aa12.88□□□□□ -0.35
DHFR-201ENST00000439211 ARFGEF3Q5TH69 2177 aa12.88□□□□□ -0.35
DHFR-201ENST00000439211 C15orf62A8K5M9 175 aa12.88□□□□□ -0.35
DHFR-201ENST00000439211 REG1BP48304 166 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms