RNA–Protein interactions for RNA: ENST00000439008.1

LINC00399-201, long intergenic non-protein coding RNA 399, humanhuman

TSL 2 BASIC

Gene LINC00399, Length 414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00399-201ENST00000439008 GSG1LQ6UXU4 331 aa9.83□□□□□ -0.84
LINC00399-201ENST00000439008 WFDC3Q8IUB2 231 aa9.83□□□□□ -0.84
LINC00399-201ENST00000439008 THAP8Q8NA92 274 aa9.83□□□□□ -0.84
LINC00399-201ENST00000439008 Q8WTZ3 238 aa9.83□□□□□ -0.84
LINC00399-201ENST00000439008 GLMPQ8WWB7 406 aa9.83□□□□□ -0.84
LINC00399-201ENST00000439008 SLC35E1Q96K37 410 aa9.83□□□□□ -0.84
LINC00399-201ENST00000439008 WWC2-AS2Q96NR7 200 aa9.83□□□□□ -0.84
LINC00399-201ENST00000439008 METTL26Q96S19 204 aa9.83□□□□□ -0.84
LINC00399-201ENST00000439008 FAM110AQ9BQ89 295 aa9.83□□□□□ -0.84
LINC00399-201ENST00000439008 MS4A6AQ9H2W1 248 aa9.83□□□□□ -0.84
LINC00399-201ENST00000439008 STRAPQ9Y3F4 350 aaKnown RBP9.83□□□□□ -0.84
LINC00399-201ENST00000439008 C7orf66A4D0T2 115 aa9.82□□□□□ -0.84
LINC00399-201ENST00000439008 OR4C46A6NHA9 309 aa9.82□□□□□ -0.84
LINC00399-201ENST00000439008 IL5P05113 134 aa9.82□□□□□ -0.84
LINC00399-201ENST00000439008 GATA2P23769 480 aaPredicted RBP9.82□□□□□ -0.84
LINC00399-201ENST00000439008 RAB11AP62491 216 aa9.82□□□□□ -0.84
LINC00399-201ENST00000439008 C16orf54Q6UWD8 224 aa9.82□□□□□ -0.84
LINC00399-201ENST00000439008 TMEM14EPQ6UXP3 125 aa9.82□□□□□ -0.84
LINC00399-201ENST00000439008 ACOT7LQ6ZUV0 252 aa9.82□□□□□ -0.84
LINC00399-201ENST00000439008 TRGV9Q99603 122 aa9.82□□□□□ -0.84
LINC00399-201ENST00000439008 MAP6D1Q9H9H5 199 aa9.82□□□□□ -0.84
LINC00399-201ENST00000439008 ZFP92A6NM28 416 aa9.81□□□□□ -0.84
LINC00399-201ENST00000439008 FAM25EA8MYX2 175 aa9.81□□□□□ -0.84
LINC00399-201ENST00000439008 K7EPK0 472 aa9.81□□□□□ -0.84
LINC00399-201ENST00000439008 BUB3O43684 328 aa9.81□□□□□ -0.84
LINC00399-201ENST00000439008 HNRNPCP07910 306 aaKnown RBP eCLIP9.81□□□□□ -0.84
LINC00399-201ENST00000439008 METTL15P1P0C7V9 234 aa9.81□□□□□ -0.84
LINC00399-201ENST00000439008 OR8G2PQ6IF36 304 aa9.81□□□□□ -0.84
LINC00399-201ENST00000439008 ENKURQ8TC29 256 aa9.81□□□□□ -0.84
LINC00399-201ENST00000439008 DCANP1Q8TF63 244 aa9.81□□□□□ -0.84
LINC00399-201ENST00000439008 RNF125Q96EQ8 232 aa9.81□□□□□ -0.84
LINC00399-201ENST00000439008 CSMD3Q7Z407 3707 aa9.81□□□□□ -0.84
LINC00399-201ENST00000439008 C5orf51A6NDU8 294 aa9.8□□□□□ -0.84
LINC00399-201ENST00000439008 K7EQG2 157 aa9.8□□□□□ -0.84
LINC00399-201ENST00000439008 SIX6O95475 246 aa9.8□□□□□ -0.84
LINC00399-201ENST00000439008 C2orf50Q96LR7 162 aa9.8□□□□□ -0.84
LINC00399-201ENST00000439008 SPATA25Q9BR10 227 aa9.8□□□□□ -0.84
LINC00399-201ENST00000439008 MARVELD1Q9BSK0 173 aa9.8□□□□□ -0.84
LINC00399-201ENST00000439008 GGTLC1Q9BX51 225 aa9.8□□□□□ -0.84
LINC00399-201ENST00000439008 ZMAT4Q9H898 229 aa9.8□□□□□ -0.84
LINC00399-201ENST00000439008 TENM2Q9NT68 2774 aa9.8□□□□□ -0.84
LINC00399-201ENST00000439008 LOC102724200A0A096LPH7 203 aaPredicted RBP9.79□□□□□ -0.84
LINC00399-201ENST00000439008 A0A1W2PS18 150 aa9.79□□□□□ -0.84
LINC00399-201ENST00000439008 INMT-MINDY4F8WBC2 141 aa9.79□□□□□ -0.84
LINC00399-201ENST00000439008 SCGB2A1O75556 95 aa9.79□□□□□ -0.84
LINC00399-201ENST00000439008 RPL35AP18077 110 aaKnown RBP9.79□□□□□ -0.84
LINC00399-201ENST00000439008 TAS2R30P59541 319 aa9.79□□□□□ -0.84
LINC00399-201ENST00000439008 LYZP61626 148 aa9.79□□□□□ -0.84
LINC00399-201ENST00000439008 RRAS2P62070 204 aaPredicted RBP9.79□□□□□ -0.84
LINC00399-201ENST00000439008 RPL11P62913 178 aaKnown RBP9.79□□□□□ -0.84
LINC00399-201ENST00000439008 RPP30P78346 268 aaKnown RBP9.79□□□□□ -0.84
LINC00399-201ENST00000439008 STXBP6Q8NFX7 210 aa9.79□□□□□ -0.84
LINC00399-201ENST00000439008 C17orf77Q96MU5 243 aa9.79□□□□□ -0.84
LINC00399-201ENST00000439008 RAB40CQ96S21 281 aa9.79□□□□□ -0.84
LINC00399-201ENST00000439008 PBDC1Q9BVG4 233 aa9.79□□□□□ -0.84
LINC00399-201ENST00000439008 EDA2RQ9HAV5 297 aa9.79□□□□□ -0.84
LINC00399-201ENST00000439008 RABAC1Q9UI14 185 aa9.79□□□□□ -0.84
LINC00399-201ENST00000439008 LSM5Q9Y4Y9 91 aaKnown RBP9.79□□□□□ -0.84
LINC00399-201ENST00000439008 KMT2CQ8NEZ4 4911 aaKnown RBP9.78□□□□□ -0.84
LINC00399-201ENST00000439008 TSC22D2O75157 780 aa9.78□□□□□ -0.84
LINC00399-201ENST00000439008 EIF2B2P49770 351 aaKnown RBP9.78□□□□□ -0.84
LINC00399-201ENST00000439008 DEFB131AP59861 70 aa9.78□□□□□ -0.84
LINC00399-201ENST00000439008 RAB32Q13637 225 aa9.78□□□□□ -0.84
LINC00399-201ENST00000439008 LEMD1Q68G75 181 aa9.78□□□□□ -0.84
LINC00399-201ENST00000439008 TMEM144Q7Z5S9 345 aa9.78□□□□□ -0.84
LINC00399-201ENST00000439008 OVOL2Q9BRP0 275 aa9.78□□□□□ -0.84
LINC00399-201ENST00000439008 TMEM231Q9H6L2 316 aa9.78□□□□□ -0.84
LINC00399-201ENST00000439008 TRAV2A0A0B4J234 112 aa9.77□□□□□ -0.85
LINC00399-201ENST00000439008 FAM24AA6NFZ4 105 aa9.77□□□□□ -0.85
LINC00399-201ENST00000439008 SNRPGP15A8MWD9 76 aa9.77□□□□□ -0.85
LINC00399-201ENST00000439008 DNASE2O00115 360 aaPredicted RBP9.77□□□□□ -0.85
LINC00399-201ENST00000439008 CD5P06127 495 aa9.77□□□□□ -0.85
LINC00399-201ENST00000439008 BMI1P35226 326 aa9.77□□□□□ -0.85
LINC00399-201ENST00000439008 DLK1P80370 383 aa9.77□□□□□ -0.85
LINC00399-201ENST00000439008 AKR1C1Q04828 323 aa9.77□□□□□ -0.85
LINC00399-201ENST00000439008 IGSF23A1L1A6 192 aa9.76□□□□□ -0.85
LINC00399-201ENST00000439008 SMCO3A2RU48 225 aa9.76□□□□□ -0.85
LINC00399-201ENST00000439008 ZNF688P0C7X2 276 aa9.76□□□□□ -0.85
LINC00399-201ENST00000439008 PAFAH1B2P68402 229 aa9.76□□□□□ -0.85
LINC00399-201ENST00000439008 KNCNA6PVL3 124 aa9.75□□□□□ -0.85
LINC00399-201ENST00000439008 H0YIZ8 118 aa9.75□□□□□ -0.85
LINC00399-201ENST00000439008 GOSR2O14653 212 aa9.75□□□□□ -0.85
LINC00399-201ENST00000439008 CST7O76096 145 aa9.75□□□□□ -0.85
LINC00399-201ENST00000439008 GIG44P09565 113 aaPredicted RBP9.75□□□□□ -0.85
LINC00399-201ENST00000439008 H2BFSP57053 126 aa9.75□□□□□ -0.85
LINC00399-201ENST00000439008 DEFB1P60022 68 aa9.75□□□□□ -0.85
LINC00399-201ENST00000439008 PATE2Q6UY27 113 aa9.75□□□□□ -0.85
LINC00399-201ENST00000439008 SIGLEC15Q6ZMC9 328 aa9.75□□□□□ -0.85
LINC00399-201ENST00000439008 CYP2G1PQ6ZSU1 146 aa9.75□□□□□ -0.85
LINC00399-201ENST00000439008 OR10P1Q8NGE3 313 aa9.75□□□□□ -0.85
LINC00399-201ENST00000439008 GRAMD2BQ96HH9 432 aa9.75□□□□□ -0.85
LINC00399-201ENST00000439008 NARS2Q96I59 477 aaKnown RBP9.75□□□□□ -0.85
LINC00399-201ENST00000439008 GPN1Q9HCN4 374 aaPredicted RBP9.75□□□□□ -0.85
LINC00399-201ENST00000439008 STARD9Q9P2P6 4700 aa9.74□□□□□ -0.85
LINC00399-201ENST00000439008 PRAF2O60831 178 aa9.74□□□□□ -0.85
LINC00399-201ENST00000439008 DEDDO75618 318 aa9.74□□□□□ -0.85
LINC00399-201ENST00000439008 ORM2P19652 201 aa9.74□□□□□ -0.85
LINC00399-201ENST00000439008 S100A10P60903 97 aa9.74□□□□□ -0.85
LINC00399-201ENST00000439008 SLC38A11Q08AI6 406 aa9.74□□□□□ -0.85
LINC00399-201ENST00000439008 DEFB135Q30KP9 77 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms