RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 CCDC160A6NGH7 325 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 CEACAM18A8MTB9 384 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 BHLHE40O14503 412 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 CDC42EP2O14613 210 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 BET1O15155 118 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 GATBO75879 557 aaKnown RBP1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 OR2J2O76002 312 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 PTTG1O95997 202 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 PTHP01270 115 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 IGKV1D-16P01601 117 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 HLA-DQB1P01920 261 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 BGLAPP02818 100 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 CLPSP04118 112 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 FABP1P07148 127 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 CD14P08571 375 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 FBP1P09467 338 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 TRAPPC2P0DI81 140 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 TRAPPC2BP0DI82 140 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 PGA4P0DJD7 388 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 PGA3P0DJD8 388 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 HIST1H1EP10412 219 aaKnown RBP1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 MYL12AP19105 171 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 GADD45AP24522 165 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 FKBP2P26885 142 aaKnown RBP1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 PSMB9P28065 219 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 GABRA3P34903 492 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 EVX1P49640 407 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 PSMD7P51665 324 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 NCS1P62166 190 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 FAM3AP98173 230 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 IFITM3Q01628 133 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 AESQ08117 197 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 STX4Q12846 297 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 C1DQ13901 141 aaKnown RBP1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 SSX1Q16384 188 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 HIST3H3Q16695 136 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 ZNF181Q2M3W8 571 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 DEFB116Q30KQ4 102 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 KRTAP13-2Q52LG2 175 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 TEX30Q5JUR7 227 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 ZNF684Q5T5D7 378 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 LINC01590Q5TEZ4 76 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 HACD4Q5VWC8 232 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 TMEM236Q5W0B7 351 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 RPL22L1Q6P5R6 122 aaKnown RBP1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 SMARCD3Q6STE5 483 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 ZNF322Q6U7Q0 402 aaPredicted RBP1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 DGAT2L6Q6ZPD8 337 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 FAM19A5Q7Z5A7 132 aaPredicted RBP1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 HMGN2P46Q86SG4 172 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 NIT1Q86X76 327 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 GAPTQ8N292 157 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 COX18Q8N8Q8 333 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 GDPD1Q8N9F7 314 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 OR1M1Q8NGA1 313 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 OR52R1Q8NGF1 315 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 OR5D16Q8NGK9 328 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 OR10G4Q8NGN3 311 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 OR9Q1Q8NGQ5 310 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 OR6K3Q8NGY3 331 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 OR2T27Q8NH04 317 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 OR2V1Q8NHB1 315 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 MCFD2Q8NI22 146 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 OR51E1Q8TCB6 317 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 RPS4Y2Q8TD47 263 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 DTD1Q8TEA8 209 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 ACOT12Q8WYK0 555 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 SLC25A46Q96AG3 418 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 EEF1AKMT3Q96AZ1 226 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 DDIT4LQ96D03 193 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 GALNT14Q96FL9 552 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 MRPL48Q96GC5 212 aaKnown RBP1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 ZNF488Q96MN9 340 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 LINC01600Q96MT4 127 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 TMEM56Q96MV1 263 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 C20orf144Q9BQM9 153 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 CCDC32Q9BV29 185 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 MND1Q9BWT6 205 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 TSSK6Q9BXA6 273 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 CCDC90BQ9GZT6 254 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 ARL6Q9H0F7 186 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 OR51E2Q9H255 320 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 OR52D1Q9H346 318 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 VSIRQ9H7M9 311 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 CACYBPQ9HB71 228 aaKnown RBP1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 ABCB9Q9NP78 766 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 IFT46Q9NQC8 304 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 PRTFDC1Q9NRG1 225 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 C19orf12Q9NSK7 152 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 TXNL4BQ9NX01 149 aaKnown RBP1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 TVP23BQ9NYZ1 205 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 ZNRD1Q9P1U0 126 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 SMPXQ9UHP9 88 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 SSR3Q9UNL2 185 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 MED31Q9Y3C7 131 aa1.28□□□□□ -2.2
HMGB1P18-201ENST00000438801 IGKV1D-42A0A075B6H8 117 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 TRAV8-4A0A0B4J246 113 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 IGHV3-66A0A0C4DH42 116 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 FAM240AA0A1B0GVK7 77 aa1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms