RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 USF2Q15853 346 aaPredicted RBP18.34■□□□□ 0.53
RAPGEF1-206ENST00000438647 IAH1Q2TAA2 248 aaPredicted RBP18.34■□□□□ 0.53
RAPGEF1-206ENST00000438647 KIR2DL5AQ8N109 375 aa18.34■□□□□ 0.53
RAPGEF1-206ENST00000438647 KIR2DL5BQ8NHK3 375 aa18.34■□□□□ 0.53
RAPGEF1-206ENST00000438647 MAP6D1Q9H9H5 199 aa18.34■□□□□ 0.53
RAPGEF1-206ENST00000438647 PFDN2Q9UHV9 154 aa18.34■□□□□ 0.53
RAPGEF1-206ENST00000438647 UBE2CO00762 179 aa18.33■□□□□ 0.52
RAPGEF1-206ENST00000438647 NUP62P37198 522 aaPredicted RBP18.33■□□□□ 0.52
RAPGEF1-206ENST00000438647 AP2S1P53680 142 aaPredicted RBP18.33■□□□□ 0.52
RAPGEF1-206ENST00000438647 APRG1Q8IVJ8 170 aa18.33■□□□□ 0.52
RAPGEF1-206ENST00000438647 RNF125Q96EQ8 232 aa18.33■□□□□ 0.52
RAPGEF1-206ENST00000438647 H3BP45 60 aa18.32■□□□□ 0.52
RAPGEF1-206ENST00000438647 ZNF846Q147U1 533 aa18.32■□□□□ 0.52
RAPGEF1-206ENST00000438647 STXBP6Q8NFX7 210 aa18.32■□□□□ 0.52
RAPGEF1-206ENST00000438647 IGKV1D-37A0A075B6S9 117 aa18.31■□□□□ 0.52
RAPGEF1-206ENST00000438647 SSSCA1O60232 199 aa18.31■□□□□ 0.52
RAPGEF1-206ENST00000438647 H2AFB2P0C5Z0 115 aa18.31■□□□□ 0.52
RAPGEF1-206ENST00000438647 LYL1P12980 280 aa18.31■□□□□ 0.52
RAPGEF1-206ENST00000438647 OR8G2PQ6IF36 304 aa18.31■□□□□ 0.52
RAPGEF1-206ENST00000438647 C16orf54Q6UWD8 224 aa18.31■□□□□ 0.52
RAPGEF1-206ENST00000438647 Q6ZWC4 215 aa18.31■□□□□ 0.52
RAPGEF1-206ENST00000438647 STPG3Q8N7X2 389 aa18.31■□□□□ 0.52
RAPGEF1-206ENST00000438647 TRGV9Q99603 122 aa18.31■□□□□ 0.52
RAPGEF1-206ENST00000438647 BATF3Q9NR55 127 aa18.31■□□□□ 0.52
RAPGEF1-206ENST00000438647 PSENENQ9NZ42 101 aa18.31■□□□□ 0.52
RAPGEF1-206ENST00000438647 SNRPGP15A8MWD9 76 aa18.3■□□□□ 0.52
RAPGEF1-206ENST00000438647 PRSS46E5RG02 174 aa18.3■□□□□ 0.52
RAPGEF1-206ENST00000438647 ZNF90Q03938 601 aa18.3■□□□□ 0.52
RAPGEF1-206ENST00000438647 ASAH1Q13510 395 aa18.3■□□□□ 0.52
RAPGEF1-206ENST00000438647 THAP8Q8NA92 274 aa18.3■□□□□ 0.52
RAPGEF1-206ENST00000438647 ZBTB8BQ8NAP8 495 aaPredicted RBP18.3■□□□□ 0.52
RAPGEF1-206ENST00000438647 ZNF431Q8TF32 576 aaPredicted RBP18.3■□□□□ 0.52
RAPGEF1-206ENST00000438647 GLMPQ8WWB7 406 aa18.3■□□□□ 0.52
RAPGEF1-206ENST00000438647 SMIM8Q96KF7 97 aa18.3■□□□□ 0.52
RAPGEF1-206ENST00000438647 RAB40CQ96S21 281 aa18.3■□□□□ 0.52
RAPGEF1-206ENST00000438647 PBDC1Q9BVG4 233 aa18.3■□□□□ 0.52
RAPGEF1-206ENST00000438647 GSKIPQ9P0R6 139 aa18.3■□□□□ 0.52
RAPGEF1-206ENST00000438647 TBC1D24Q9ULP9 559 aa18.3■□□□□ 0.52
RAPGEF1-206ENST00000438647 TP53TG1Q9Y2A0 90 aa18.3■□□□□ 0.52
RAPGEF1-206ENST00000438647 BUB3O43684 328 aa18.29■□□□□ 0.52
RAPGEF1-206ENST00000438647 SCGB1D2O95969 90 aa18.29■□□□□ 0.52
RAPGEF1-206ENST00000438647 CFDP00746 253 aaPredicted RBP18.29■□□□□ 0.52
RAPGEF1-206ENST00000438647 RPL35AP18077 110 aaKnown RBP18.29■□□□□ 0.52
RAPGEF1-206ENST00000438647 KMT2CQ8NEZ4 4911 aaKnown RBP18.28■□□□□ 0.52
RAPGEF1-206ENST00000438647 K7EQG2 157 aa18.28■□□□□ 0.52
RAPGEF1-206ENST00000438647 DEFB131AP59861 70 aa18.28■□□□□ 0.52
RAPGEF1-206ENST00000438647 OVOL2Q9BRP0 275 aa18.28■□□□□ 0.52
RAPGEF1-206ENST00000438647 UPK1BO75841 260 aa18.27■□□□□ 0.52
RAPGEF1-206ENST00000438647 LYZP61626 148 aa18.27■□□□□ 0.52
RAPGEF1-206ENST00000438647 AKR1C1Q04828 323 aa18.27■□□□□ 0.52
RAPGEF1-206ENST00000438647 ZNF124Q15973 351 aa18.27■□□□□ 0.52
RAPGEF1-206ENST00000438647 CASC10Q5T4H9 136 aa18.27■□□□□ 0.52
RAPGEF1-206ENST00000438647 ACOT7LQ6ZUV0 252 aa18.27■□□□□ 0.52
RAPGEF1-206ENST00000438647 DCANP1Q8TF63 244 aa18.27■□□□□ 0.52
RAPGEF1-206ENST00000438647 SEC22CQ9BRL7 303 aa18.27■□□□□ 0.52
RAPGEF1-206ENST00000438647 IGKV1OR2-108A0A075B7D4 117 aa18.26■□□□□ 0.51
RAPGEF1-206ENST00000438647 TAS2R30P59541 319 aa18.26■□□□□ 0.51
RAPGEF1-206ENST00000438647 SIGLEC15Q6ZMC9 328 aa18.26■□□□□ 0.51
RAPGEF1-206ENST00000438647 C12orf45Q8N5I9 185 aaPredicted RBP18.26■□□□□ 0.51
RAPGEF1-206ENST00000438647 FAM24BQ8N5W8 94 aa18.26■□□□□ 0.51
RAPGEF1-206ENST00000438647 ENKURQ8TC29 256 aa18.26■□□□□ 0.51
RAPGEF1-206ENST00000438647 SPRY2O43597 315 aa18.25■□□□□ 0.51
RAPGEF1-206ENST00000438647 OR2F1Q13607 317 aa18.25■□□□□ 0.51
RAPGEF1-206ENST00000438647 DEFB135Q30KP9 77 aa18.25■□□□□ 0.51
RAPGEF1-206ENST00000438647 LEMD1Q68G75 181 aa18.25■□□□□ 0.51
RAPGEF1-206ENST00000438647 IL17DQ8TAD2 202 aa18.25■□□□□ 0.51
RAPGEF1-206ENST00000438647 CSTL1Q9H114 145 aa18.25■□□□□ 0.51
RAPGEF1-206ENST00000438647 FAM25EA8MYX2 175 aa18.24■□□□□ 0.51
RAPGEF1-206ENST00000438647 CCSO14618 274 aa18.24■□□□□ 0.51
RAPGEF1-206ENST00000438647 TSC22D2O75157 780 aa18.24■□□□□ 0.51
RAPGEF1-206ENST00000438647 TMEM14EPQ6UXP3 125 aa18.24■□□□□ 0.51
RAPGEF1-206ENST00000438647 TMEM144Q7Z5S9 345 aa18.24■□□□□ 0.51
RAPGEF1-206ENST00000438647 NRN1Q9NPD7 142 aa18.24■□□□□ 0.51
RAPGEF1-206ENST00000438647 FBXL17Q9UF56 701 aa18.24■□□□□ 0.51
RAPGEF1-206ENST00000438647 RCL1Q9Y2P8 373 aaKnown RBP18.24■□□□□ 0.51
RAPGEF1-206ENST00000438647 SMCO3A2RU48 225 aa18.23■□□□□ 0.51
RAPGEF1-206ENST00000438647 C5orf51A6NDU8 294 aa18.23■□□□□ 0.51
RAPGEF1-206ENST00000438647 MBPP02686 304 aaPredicted RBP18.23■□□□□ 0.51
RAPGEF1-206ENST00000438647 ZNF688P0C7X2 276 aa18.23■□□□□ 0.51
RAPGEF1-206ENST00000438647 PAX9P55771 341 aa18.23■□□□□ 0.51
RAPGEF1-206ENST00000438647 C1orf194Q5T5A4 169 aa18.23■□□□□ 0.51
RAPGEF1-206ENST00000438647 STHQ8IWL8 128 aa18.23■□□□□ 0.51
RAPGEF1-206ENST00000438647 BPIFCQ8NFQ6 507 aa18.23■□□□□ 0.51
RAPGEF1-206ENST00000438647 PPP1R14BQ96C90 147 aa18.23■□□□□ 0.51
RAPGEF1-206ENST00000438647 SEPSECSQ9HD40 501 aaKnown RBP18.23■□□□□ 0.51
RAPGEF1-206ENST00000438647 PMS2P5A8MQ11 134 aa18.22■□□□□ 0.51
RAPGEF1-206ENST00000438647 IL5P05113 134 aa18.22■□□□□ 0.51
RAPGEF1-206ENST00000438647 METTL15P1P0C7V9 234 aa18.22■□□□□ 0.51
RAPGEF1-206ENST00000438647 S100A7P31151 101 aa18.22■□□□□ 0.51
RAPGEF1-206ENST00000438647 SNRPD3P62318 126 aaKnown RBP18.22■□□□□ 0.51
RAPGEF1-206ENST00000438647 DLK1P80370 383 aa18.22■□□□□ 0.51
RAPGEF1-206ENST00000438647 OR10P1Q8NGE3 313 aa18.22■□□□□ 0.51
RAPGEF1-206ENST00000438647 RNF183Q96D59 192 aa18.22■□□□□ 0.51
RAPGEF1-206ENST00000438647 SLC45A2Q9UMX9 530 aa18.22■□□□□ 0.51
RAPGEF1-206ENST00000438647 FNDC10F2Z333 226 aa18.21■□□□□ 0.51
RAPGEF1-206ENST00000438647 L7N2F9 121 aa18.21■□□□□ 0.51
RAPGEF1-206ENST00000438647 VAMP2P63027 116 aa18.21■□□□□ 0.51
RAPGEF1-206ENST00000438647 MGAT4CQ9UBM8 478 aa18.21■□□□□ 0.51
RAPGEF1-206ENST00000438647 C7orf66A4D0T2 115 aa18.2■□□□□ 0.5
RAPGEF1-206ENST00000438647 GSG1LQ6UXU4 331 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms