RNA–Protein interactions for RNA: ENST00000438581.6

TMEM39A-202, Transcript of transmembrane protein 39A, humanhuman

TSL 1 (best)

Gene TMEM39A, Length 4,393 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-202ENST00000438581 OR9G9P0C7N8 305 aa6.68□□□□□ -1.34
TMEM39A-202ENST00000438581 GZMBP10144 247 aa6.68□□□□□ -1.34
TMEM39A-202ENST00000438581 TFPI2P48307 235 aa6.68□□□□□ -1.34
TMEM39A-202ENST00000438581 EFNA4P52798 201 aa6.68□□□□□ -1.34
TMEM39A-202ENST00000438581 KLRD1Q13241 179 aa6.68□□□□□ -1.34
TMEM39A-202ENST00000438581 COA6Q5JTJ3 125 aaKnown RBP6.68□□□□□ -1.34
TMEM39A-202ENST00000438581 OR1P1Q8NH06 330 aa6.68□□□□□ -1.34
TMEM39A-202ENST00000438581 GAFA1Q96PS6 74 aa6.68□□□□□ -1.34
TMEM39A-202ENST00000438581 BEX4Q9NWD9 120 aaPredicted RBP6.68□□□□□ -1.34
TMEM39A-202ENST00000438581 IGHV3-49A0A0A0MS15 119 aa6.67□□□□□ -1.34
TMEM39A-202ENST00000438581 IGKV1-6A0A0C4DH72 117 aa6.67□□□□□ -1.34
TMEM39A-202ENST00000438581 SMIM9A6NGZ8 99 aa6.67□□□□□ -1.34
TMEM39A-202ENST00000438581 TIMM23O14925 209 aa6.67□□□□□ -1.34
TMEM39A-202ENST00000438581 DANCRP0C864 163 aa6.67□□□□□ -1.34
TMEM39A-202ENST00000438581 DLX1P56177 255 aa6.67□□□□□ -1.34
TMEM39A-202ENST00000438581 MEF2BQ02080 365 aaPredicted RBP6.67□□□□□ -1.34
TMEM39A-202ENST00000438581 ID3Q02535 119 aa6.67□□□□□ -1.34
TMEM39A-202ENST00000438581 GBGT1Q8N5D6 347 aa6.67□□□□□ -1.34
TMEM39A-202ENST00000438581 CFHR4Q92496 578 aa6.67□□□□□ -1.34
TMEM39A-202ENST00000438581 NABP2Q9BQ15 211 aa6.67□□□□□ -1.34
TMEM39A-202ENST00000438581 CHD9Q3L8U1 2897 aa6.67□□□□□ -1.34
TMEM39A-202ENST00000438581 RRHO14718 337 aa6.67□□□□□ -1.34
TMEM39A-202ENST00000438581 TPPP2P59282 170 aa6.67□□□□□ -1.34
TMEM39A-202ENST00000438581 HLA-DRB5Q30154 266 aa6.67□□□□□ -1.34
TMEM39A-202ENST00000438581 STPG3Q8N7X2 389 aa6.67□□□□□ -1.34
TMEM39A-202ENST00000438581 OR10G8Q8NGN5 311 aa6.67□□□□□ -1.34
TMEM39A-202ENST00000438581 ERG28Q9UKR5 140 aa6.67□□□□□ -1.34
TMEM39A-202ENST00000438581 LAMTOR2Q9Y2Q5 125 aa6.67□□□□□ -1.34
TMEM39A-202ENST00000438581 IGLV1-44P01699 117 aa6.67□□□□□ -1.34
TMEM39A-202ENST00000438581 IGFBP2P18065 325 aa6.67□□□□□ -1.34
TMEM39A-202ENST00000438581 AZU1P20160 251 aa6.67□□□□□ -1.34
TMEM39A-202ENST00000438581 ZNF415Q09FC8 603 aa6.67□□□□□ -1.34
TMEM39A-202ENST00000438581 CYYR1Q96J86 154 aa6.67□□□□□ -1.34
TMEM39A-202ENST00000438581 TMSB15BA0A087X1C1 80 aa6.66□□□□□ -1.34
TMEM39A-202ENST00000438581 LINC00473A8K010 186 aa6.66□□□□□ -1.34
TMEM39A-202ENST00000438581 J3KT08 172 aa6.66□□□□□ -1.34
TMEM39A-202ENST00000438581 FGF16O43320 207 aa6.66□□□□□ -1.34
TMEM39A-202ENST00000438581 ARL14EPLP0DKL9 152 aa6.66□□□□□ -1.34
TMEM39A-202ENST00000438581 HTN1P15515 57 aa6.66□□□□□ -1.34
TMEM39A-202ENST00000438581 ZNF525Q8N782 197 aa6.66□□□□□ -1.34
TMEM39A-202ENST00000438581 DNAJC30Q96LL9 226 aa6.66□□□□□ -1.34
TMEM39A-202ENST00000438581 HIST1H2BLQ99880 126 aa6.66□□□□□ -1.34
TMEM39A-202ENST00000438581 WNK1Q9H4A3 2382 aa6.66□□□□□ -1.34
TMEM39A-202ENST00000438581 PGPA6NDG6 321 aa6.66□□□□□ -1.34
TMEM39A-202ENST00000438581 UPK2O00526 184 aa6.66□□□□□ -1.34
TMEM39A-202ENST00000438581 IGHV1-8P0DP01 117 aa6.66□□□□□ -1.34
TMEM39A-202ENST00000438581 HSD52Q0P140 79 aa6.66□□□□□ -1.34
TMEM39A-202ENST00000438581 PNRC1Q12796 327 aaPredicted RBP6.66□□□□□ -1.34
TMEM39A-202ENST00000438581 FASNP49327 2511 aaKnown RBP6.66□□□□□ -1.34
TMEM39A-202ENST00000438581 TRAV40A0A0B4J280 105 aa6.66□□□□□ -1.34
TMEM39A-202ENST00000438581 CGB1A6NKQ9 187 aa6.66□□□□□ -1.34
TMEM39A-202ENST00000438581 IGKV1-5P01602 117 aa6.66□□□□□ -1.34
TMEM39A-202ENST00000438581 MDKP21741 143 aaPredicted RBP6.66□□□□□ -1.34
TMEM39A-202ENST00000438581 COL8A1P27658 744 aa6.66□□□□□ -1.34
TMEM39A-202ENST00000438581 BPESC1Q9GZL8 116 aa6.66□□□□□ -1.34
TMEM39A-202ENST00000438581 IFI27L2Q9H2X8 130 aa6.66□□□□□ -1.34
TMEM39A-202ENST00000438581 LINC00527Q9UJ94 153 aa6.66□□□□□ -1.34
TMEM39A-202ENST00000438581 TRAPPC1Q9Y5R8 145 aa6.66□□□□□ -1.34
TMEM39A-202ENST00000438581 WIPF3A6NGB9 483 aa6.66□□□□□ -1.34
TMEM39A-202ENST00000438581 IL4P05112 153 aa6.66□□□□□ -1.34
TMEM39A-202ENST00000438581 AMTP48728 403 aa6.66□□□□□ -1.34
TMEM39A-202ENST00000438581 ZNF137PP52743 207 aa6.66□□□□□ -1.34
TMEM39A-202ENST00000438581 PQLC2Q6ZP29 291 aa6.66□□□□□ -1.34
TMEM39A-202ENST00000438581 C19orf35Q6ZS72 473 aa6.66□□□□□ -1.34
TMEM39A-202ENST00000438581 PPP1R27Q86WC6 154 aa6.66□□□□□ -1.34
TMEM39A-202ENST00000438581 NPCDR1Q9BY65 106 aa6.66□□□□□ -1.34
TMEM39A-202ENST00000438581 PSG8Q9UQ74 426 aa6.66□□□□□ -1.34
TMEM39A-202ENST00000438581 USP9XQ93008 2570 aaPredicted RBP6.66□□□□□ -1.34
TMEM39A-202ENST00000438581 IGHV2-26A0A0B4J1V2 119 aa6.65□□□□□ -1.34
TMEM39A-202ENST00000438581 TRAV3A0A0B4J244 114 aa6.65□□□□□ -1.34
TMEM39A-202ENST00000438581 A6NNC1 897 aa6.65□□□□□ -1.34
TMEM39A-202ENST00000438581 IGLV3-1P01715 115 aa6.65□□□□□ -1.34
TMEM39A-202ENST00000438581 MYOD1P15172 320 aa6.65□□□□□ -1.34
TMEM39A-202ENST00000438581 EVI2AP22794 236 aa6.65□□□□□ -1.34
TMEM39A-202ENST00000438581 FER1L6-AS1Q8NA97 138 aa6.65□□□□□ -1.34
TMEM39A-202ENST00000438581 SRSF12Q8WXF0 261 aaKnown RBP6.65□□□□□ -1.34
TMEM39A-202ENST00000438581 CCDC140Q96MF4 163 aa6.65□□□□□ -1.34
TMEM39A-202ENST00000438581 LIME1Q9H400 295 aa6.65□□□□□ -1.34
TMEM39A-202ENST00000438581 SOX21Q9Y651 276 aaPredicted RBP6.65□□□□□ -1.34
TMEM39A-202ENST00000438581 FCN1O00602 326 aa6.65□□□□□ -1.34
TMEM39A-202ENST00000438581 SLC35B1P78383 322 aa6.65□□□□□ -1.34
TMEM39A-202ENST00000438581 TEX38Q6PEX7 206 aa6.65□□□□□ -1.34
TMEM39A-202ENST00000438581 DPPA3Q6W0C5 159 aa6.65□□□□□ -1.34
TMEM39A-202ENST00000438581 SEM1Q6ZVN7 128 aa6.65□□□□□ -1.34
TMEM39A-202ENST00000438581 SLC25A33Q9BSK2 321 aa6.65□□□□□ -1.34
TMEM39A-202ENST00000438581 DERL1Q9BUN8 251 aa6.65□□□□□ -1.34
TMEM39A-202ENST00000438581 SS18L2Q9UHA2 77 aa6.65□□□□□ -1.34
TMEM39A-202ENST00000438581 CSDC2Q9Y534 153 aaKnown RBP6.65□□□□□ -1.34
TMEM39A-202ENST00000438581 SETD2Q9BYW2 2564 aaPredicted RBP6.65□□□□□ -1.34
TMEM39A-202ENST00000438581 PRB1P04280 392 aa6.65□□□□□ -1.35
TMEM39A-202ENST00000438581 CFPP27918 469 aa6.65□□□□□ -1.35
TMEM39A-202ENST00000438581 SRSF7Q16629 238 aaKnown RBP eCLIP6.65□□□□□ -1.35
TMEM39A-202ENST00000438581 LRRC75BQ2VPJ9 315 aa6.65□□□□□ -1.35
TMEM39A-202ENST00000438581 BRD3OSQ6XYD6 125 aa6.65□□□□□ -1.35
TMEM39A-202ENST00000438581 PRNTQ86SH4 94 aa6.65□□□□□ -1.35
TMEM39A-202ENST00000438581 LRTM2Q8N967 370 aa6.65□□□□□ -1.35
TMEM39A-202ENST00000438581 OR51G1Q8NGK1 321 aa6.65□□□□□ -1.35
TMEM39A-202ENST00000438581 PMCHL2Q9BQD1 86 aa6.65□□□□□ -1.35
TMEM39A-202ENST00000438581 FOXA2Q9Y261 457 aaPredicted RBP6.65□□□□□ -1.35
TMEM39A-202ENST00000438581 EPG5Q9HCE0 2579 aa6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms