RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 AP1S1P61966 158 aa1.45□□□□□ -2.18
TRAPPC13-204ENST00000438419 CAV1Q03135 178 aa1.45□□□□□ -2.18
TRAPPC13-204ENST00000438419 FADDQ13158 208 aa1.45□□□□□ -2.18
TRAPPC13-204ENST00000438419 MIAQ16674 131 aa1.45□□□□□ -2.18
TRAPPC13-204ENST00000438419 PABPC1L2AQ5JQF8 200 aa1.45□□□□□ -2.18
TRAPPC13-204ENST00000438419 TBC1D19Q8N5T2 526 aa1.45□□□□□ -2.18
TRAPPC13-204ENST00000438419 CLDN22Q8N7P3 220 aa1.45□□□□□ -2.18
TRAPPC13-204ENST00000438419 OR1L8Q8NGR8 309 aa1.45□□□□□ -2.18
TRAPPC13-204ENST00000438419 DCANP1Q8TF63 244 aa1.45□□□□□ -2.18
TRAPPC13-204ENST00000438419 KLK6Q92876 244 aa1.45□□□□□ -2.18
TRAPPC13-204ENST00000438419 ROPN1LQ96C74 230 aa1.45□□□□□ -2.18
TRAPPC13-204ENST00000438419 KLF6Q99612 283 aaPredicted RBP1.45□□□□□ -2.18
TRAPPC13-204ENST00000438419 CMTM6Q9NX76 183 aa1.45□□□□□ -2.18
TRAPPC13-204ENST00000438419 HHLA3Q9XRX5 114 aa1.45□□□□□ -2.18
TRAPPC13-204ENST00000438419 DDX60Q8IY21 1712 aaKnown RBP1.45□□□□□ -2.18
TRAPPC13-204ENST00000438419 CD163L1Q9NR16 1453 aa1.45□□□□□ -2.18
TRAPPC13-204ENST00000438419 CELSR1Q9NYQ6 3014 aa1.44□□□□□ -2.18
TRAPPC13-204ENST00000438419 HIVEP1P15822 2718 aa1.44□□□□□ -2.18
TRAPPC13-204ENST00000438419 COL11A1P12107 1806 aaPredicted RBP1.44□□□□□ -2.18
TRAPPC13-204ENST00000438419 ANKRD30AQ9BXX3 1397 aa1.44□□□□□ -2.18
TRAPPC13-204ENST00000438419 COL6A5A8TX70 2615 aa1.44□□□□□ -2.18
TRAPPC13-204ENST00000438419 DOCK5Q9H7D0 1870 aa1.44□□□□□ -2.18
TRAPPC13-204ENST00000438419 DUOX1Q9NRD9 1551 aa1.44□□□□□ -2.18
TRAPPC13-204ENST00000438419 TLN2Q9Y4G6 2542 aa1.44□□□□□ -2.18
TRAPPC13-204ENST00000438419 MYOM3Q5VTT5 1437 aa1.44□□□□□ -2.18
TRAPPC13-204ENST00000438419 TMEM114B3SHH9 223 aa1.44□□□□□ -2.18
TRAPPC13-204ENST00000438419 I3L521 148 aa1.44□□□□□ -2.18
TRAPPC13-204ENST00000438419 KPNA3O00505 521 aaPredicted RBP1.44□□□□□ -2.18
TRAPPC13-204ENST00000438419 NSA2O95478 260 aaKnown RBP1.44□□□□□ -2.18
TRAPPC13-204ENST00000438419 CD79AP11912 226 aa1.44□□□□□ -2.18
TRAPPC13-204ENST00000438419 S100A7P31151 101 aa1.44□□□□□ -2.18
TRAPPC13-204ENST00000438419 OR4D2P58180 307 aa1.44□□□□□ -2.18
TRAPPC13-204ENST00000438419 POLR2GP62487 172 aaKnown RBP eCLIP1.44□□□□□ -2.18
TRAPPC13-204ENST00000438419 RANP62826 216 aaKnown RBP1.44□□□□□ -2.18
TRAPPC13-204ENST00000438419 SPOPLQ6IQ16 392 aa1.44□□□□□ -2.18
TRAPPC13-204ENST00000438419 ZNF705AQ6ZN79 300 aaPredicted RBP1.44□□□□□ -2.18
TRAPPC13-204ENST00000438419 SSX8Q7RTT4 187 aa1.44□□□□□ -2.18
TRAPPC13-204ENST00000438419 LRRC28Q86X40 367 aaPredicted RBP1.44□□□□□ -2.18
TRAPPC13-204ENST00000438419 PPP1R2P1Q96PQ5 205 aa1.44□□□□□ -2.18
TRAPPC13-204ENST00000438419 OR52E6Q96RD3 313 aa1.44□□□□□ -2.18
TRAPPC13-204ENST00000438419 IMMP2LQ96T52 175 aa1.44□□□□□ -2.18
TRAPPC13-204ENST00000438419 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.44□□□□□ -2.18
TRAPPC13-204ENST00000438419 PAQR5Q9NXK6 330 aaPredicted RBP1.44□□□□□ -2.18
TRAPPC13-204ENST00000438419 PKIGQ9Y2B9 76 aa1.44□□□□□ -2.18
TRAPPC13-204ENST00000438419 RBM7Q9Y580 266 aaKnown RBP1.44□□□□□ -2.18
TRAPPC13-204ENST00000438419 TIMM9Q9Y5J7 89 aa1.44□□□□□ -2.18
TRAPPC13-204ENST00000438419 SPENQ96T58 3664 aaKnown RBP1.44□□□□□ -2.18
TRAPPC13-204ENST00000438419 CELSR2Q9HCU4 2923 aa1.44□□□□□ -2.18
TRAPPC13-204ENST00000438419 TGP01266 2768 aa1.44□□□□□ -2.18
TRAPPC13-204ENST00000438419 ZNF831Q5JPB2 1677 aa1.44□□□□□ -2.18
TRAPPC13-204ENST00000438419 CSMD1Q96PZ7 3565 aa1.43□□□□□ -2.18
TRAPPC13-204ENST00000438419 ADGRG4Q8IZF6 3080 aa1.43□□□□□ -2.18
TRAPPC13-204ENST00000438419 IGLV3-9A0A075B6K5 115 aa1.43□□□□□ -2.18
TRAPPC13-204ENST00000438419 TMSB15BA0A087X1C1 80 aa1.43□□□□□ -2.18
TRAPPC13-204ENST00000438419 H3BT86 120 aa1.43□□□□□ -2.18
TRAPPC13-204ENST00000438419 PSMD12O00232 456 aaPredicted RBP1.43□□□□□ -2.18
TRAPPC13-204ENST00000438419 CREBL2O60519 120 aaPredicted RBP1.43□□□□□ -2.18
TRAPPC13-204ENST00000438419 S1PR2O95136 353 aa1.43□□□□□ -2.18
TRAPPC13-204ENST00000438419 SRP19P09132 144 aaKnown RBP1.43□□□□□ -2.18
TRAPPC13-204ENST00000438419 TFPTP0C1Z6 253 aa1.43□□□□□ -2.18
TRAPPC13-204ENST00000438419 ZNF705DP0CH99 300 aaPredicted RBP1.43□□□□□ -2.18
TRAPPC13-204ENST00000438419 HAAOP46952 286 aa1.43□□□□□ -2.18
TRAPPC13-204ENST00000438419 CSN1S1P47710 185 aa1.43□□□□□ -2.18
TRAPPC13-204ENST00000438419 IDH3GP51553 393 aaPredicted RBP1.43□□□□□ -2.18
TRAPPC13-204ENST00000438419 AP3S2P59780 193 aa1.43□□□□□ -2.18
TRAPPC13-204ENST00000438419 TMEM258P61165 79 aa1.43□□□□□ -2.18
TRAPPC13-204ENST00000438419 PSME3P61289 254 aa1.43□□□□□ -2.18
TRAPPC13-204ENST00000438419 MRPS15P82914 257 aaKnown RBP1.43□□□□□ -2.18
TRAPPC13-204ENST00000438419 AKR1C1Q04828 323 aa1.43□□□□□ -2.18
TRAPPC13-204ENST00000438419 SLC38A11Q08AI6 406 aa1.43□□□□□ -2.18
TRAPPC13-204ENST00000438419 STX5Q13190 355 aa1.43□□□□□ -2.18
TRAPPC13-204ENST00000438419 GRK1Q15835 563 aa1.43□□□□□ -2.18
TRAPPC13-204ENST00000438419 GUK1Q16774 197 aa1.43□□□□□ -2.18
TRAPPC13-204ENST00000438419 ACOT6Q3I5F7 207 aaPredicted RBP1.43□□□□□ -2.18
TRAPPC13-204ENST00000438419 GLT8D1Q68CQ7 371 aa1.43□□□□□ -2.18
TRAPPC13-204ENST00000438419 TIMM21Q9BVV7 248 aa1.43□□□□□ -2.18
TRAPPC13-204ENST00000438419 PRO2289Q9P1D8 64 aa1.43□□□□□ -2.18
TRAPPC13-204ENST00000438419 NAT8Q9UHE5 227 aa1.43□□□□□ -2.18
TRAPPC13-204ENST00000438419 SLC22A13Q9Y226 551 aa1.43□□□□□ -2.18
TRAPPC13-204ENST00000438419 PHIPQ8WWQ0 1821 aa1.43□□□□□ -2.18
TRAPPC13-204ENST00000438419 SORL1Q92673 2214 aa1.43□□□□□ -2.18
TRAPPC13-204ENST00000438419 MGAMO43451 1857 aa1.43□□□□□ -2.18
TRAPPC13-204ENST00000438419 RGPD2P0DJD1 1756 aa1.43□□□□□ -2.18
TRAPPC13-204ENST00000438419 MYH11P35749 1972 aa1.43□□□□□ -2.18
TRAPPC13-204ENST00000438419 PCDH15Q96QU1 1955 aa1.43□□□□□ -2.18
TRAPPC13-204ENST00000438419 TRBV20OR9-2A0A075B6H5 130 aa1.42□□□□□ -2.18
TRAPPC13-204ENST00000438419 A0A0J9YW62 118 aa1.42□□□□□ -2.18
TRAPPC13-204ENST00000438419 A0A0J9YY10 115 aa1.42□□□□□ -2.18
TRAPPC13-204ENST00000438419 A0A1B0GX78 115 aa1.42□□□□□ -2.18
TRAPPC13-204ENST00000438419 TMEM210A6NLX4 147 aa1.42□□□□□ -2.18
TRAPPC13-204ENST00000438419 LEPROTO15243 131 aa1.42□□□□□ -2.18
TRAPPC13-204ENST00000438419 DEFA4P12838 97 aa1.42□□□□□ -2.18
TRAPPC13-204ENST00000438419 RPL28P46779 137 aaKnown RBP1.42□□□□□ -2.18
TRAPPC13-204ENST00000438419 SRSF6Q13247 344 aaKnown RBP1.42□□□□□ -2.18
TRAPPC13-204ENST00000438419 TPRXLQ17RH7 258 aa1.42□□□□□ -2.18
TRAPPC13-204ENST00000438419 PCOTHQ58A44 107 aa1.42□□□□□ -2.18
TRAPPC13-204ENST00000438419 Q6ZTI0 123 aa1.42□□□□□ -2.18
TRAPPC13-204ENST00000438419 C20orf196Q8IYI0 205 aa1.42□□□□□ -2.18
TRAPPC13-204ENST00000438419 LRRC25Q8N386 305 aaPredicted RBP1.42□□□□□ -2.18
TRAPPC13-204ENST00000438419 DCUN1D1Q96GG9 259 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms