RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 TCEAL7Q9BRU2 100 aa20.29■□□□□ 0.84
CPNE1-216ENST00000437340 CENPEQ02224 2701 aa20.29■□□□□ 0.84
CPNE1-216ENST00000437340 MDFIC2A0A1B0GVS7 189 aa20.29■□□□□ 0.84
CPNE1-216ENST00000437340 PGPEP1LA6NFU8 196 aa20.29■□□□□ 0.84
CPNE1-216ENST00000437340 PYYP10082 97 aa20.29■□□□□ 0.84
CPNE1-216ENST00000437340 PSG1P11464 419 aa20.29■□□□□ 0.84
CPNE1-216ENST00000437340 ZNF48Q96MX3 618 aaPredicted RBP20.29■□□□□ 0.84
CPNE1-216ENST00000437340 RBM14Q96PK6 669 aaKnown RBP20.29■□□□□ 0.84
CPNE1-216ENST00000437340 IGKV1-17P01599 117 aa20.28■□□□□ 0.84
CPNE1-216ENST00000437340 SNRPEP62304 92 aaKnown RBP20.28■□□□□ 0.84
CPNE1-216ENST00000437340 FAM120AOSQ5T036 256 aa20.28■□□□□ 0.84
CPNE1-216ENST00000437340 HIST2H2BCQ6DN03 193 aa20.28■□□□□ 0.84
CPNE1-216ENST00000437340 PIP4P2Q8N4L2 257 aa20.28■□□□□ 0.84
CPNE1-216ENST00000437340 FANCD2OSQ96PS1 177 aa20.28■□□□□ 0.84
CPNE1-216ENST00000437340 GSX1Q9H4S2 264 aaPredicted RBP20.28■□□□□ 0.84
CPNE1-216ENST00000437340 HIGD1AQ9Y241 93 aa20.28■□□□□ 0.84
CPNE1-216ENST00000437340 NBPF19A0A087WUL8 3843 aa20.28■□□□□ 0.84
CPNE1-216ENST00000437340 IGHV7-81A0A0B4J1V7 117 aa20.27■□□□□ 0.84
CPNE1-216ENST00000437340 TIGITQ495A1 244 aa20.27■□□□□ 0.84
CPNE1-216ENST00000437340 KCNIP4Q6PIL6 250 aa20.27■□□□□ 0.84
CPNE1-216ENST00000437340 NECAP1Q8NC96 275 aa20.27■□□□□ 0.84
CPNE1-216ENST00000437340 AURKAIP1Q9NWT8 199 aaPredicted RBP20.27■□□□□ 0.84
CPNE1-216ENST00000437340 TRAV30A0A087WSZ9 112 aa20.26■□□□□ 0.83
CPNE1-216ENST00000437340 GGCTO75223 188 aaKnown RBP20.26■□□□□ 0.83
CPNE1-216ENST00000437340 RD3LP0DJH9 198 aa20.26■□□□□ 0.83
CPNE1-216ENST00000437340 PAX1P15863 534 aa20.26■□□□□ 0.83
CPNE1-216ENST00000437340 ELOVL1Q9BW60 279 aa20.26■□□□□ 0.83
CPNE1-216ENST00000437340 THYN1Q9P016 225 aa20.26■□□□□ 0.83
CPNE1-216ENST00000437340 GCN1Q92616 2671 aaKnown RBP20.26■□□□□ 0.83
CPNE1-216ENST00000437340 DSCR9P59020 149 aa20.26■□□□□ 0.83
CPNE1-216ENST00000437340 TEX38Q6PEX7 206 aa20.26■□□□□ 0.83
CPNE1-216ENST00000437340 BTF3L4Q96K17 158 aa20.26■□□□□ 0.83
CPNE1-216ENST00000437340 SRD5A3Q9H8P0 318 aa20.26■□□□□ 0.83
CPNE1-216ENST00000437340 UBE2CO00762 179 aa20.25■□□□□ 0.83
CPNE1-216ENST00000437340 GNG4P50150 75 aa20.25■□□□□ 0.83
CPNE1-216ENST00000437340 PTPN13Q12923 2485 aa20.25■□□□□ 0.83
CPNE1-216ENST00000437340 VPS13CQ709C8 3753 aa20.25■□□□□ 0.83
CPNE1-216ENST00000437340 IGHV4-30-2A0A087WSY4 118 aa20.24■□□□□ 0.83
CPNE1-216ENST00000437340 AP4M1O00189 453 aa20.24■□□□□ 0.83
CPNE1-216ENST00000437340 TRGC2P03986 189 aa20.24■□□□□ 0.83
CPNE1-216ENST00000437340 EGR2P11161 476 aaPredicted RBP20.24■□□□□ 0.83
CPNE1-216ENST00000437340 LYZP61626 148 aa20.24■□□□□ 0.83
CPNE1-216ENST00000437340 KLF17Q5JT82 389 aaPredicted RBP20.24■□□□□ 0.83
CPNE1-216ENST00000437340 MRPL27Q9P0M9 148 aaKnown RBP20.24■□□□□ 0.83
CPNE1-216ENST00000437340 CSMD2Q7Z408 3487 aa20.24■□□□□ 0.83
CPNE1-216ENST00000437340 TOMM40O96008 361 aa20.23■□□□□ 0.83
CPNE1-216ENST00000437340 FOXL1Q12952 345 aa20.23■□□□□ 0.83
CPNE1-216ENST00000437340 CENPWQ5EE01 88 aa20.23■□□□□ 0.83
CPNE1-216ENST00000437340 ZNF329Q86UD4 541 aa20.23■□□□□ 0.83
CPNE1-216ENST00000437340 OR10G8Q8NGN5 311 aa20.23■□□□□ 0.83
CPNE1-216ENST00000437340 ANKRD17O75179 2603 aaKnown RBP20.23■□□□□ 0.83
CPNE1-216ENST00000437340 IGHV1-69DA0A0B4J2H0 117 aa20.23■□□□□ 0.83
CPNE1-216ENST00000437340 K7EN84 100 aa20.23■□□□□ 0.83
CPNE1-216ENST00000437340 IGHV1-69P01742 117 aa20.23■□□□□ 0.83
CPNE1-216ENST00000437340 GP9P14770 177 aa20.23■□□□□ 0.83
CPNE1-216ENST00000437340 MYCNOSP40205 109 aa20.23■□□□□ 0.83
CPNE1-216ENST00000437340 MFAP4P55083 255 aa20.23■□□□□ 0.83
CPNE1-216ENST00000437340 TAS2R60P59551 318 aa20.23■□□□□ 0.83
CPNE1-216ENST00000437340 YPEL3P61236 119 aaPredicted RBP20.23■□□□□ 0.83
CPNE1-216ENST00000437340 ABCA1O95477 2261 aa20.22■□□□□ 0.83
CPNE1-216ENST00000437340 PPP5D1E7EU14 171 aa20.22■□□□□ 0.83
CPNE1-216ENST00000437340 SGMS2Q8NHU3 365 aa20.22■□□□□ 0.83
CPNE1-216ENST00000437340 SLC25A39Q9BZJ4 359 aaPredicted RBP20.22■□□□□ 0.83
CPNE1-216ENST00000437340 TMEM14CQ9P0S9 112 aa20.22■□□□□ 0.83
CPNE1-216ENST00000437340 ASH1LQ9NR48 2969 aaKnown RBP20.22■□□□□ 0.83
CPNE1-216ENST00000437340 A0A1W2PPQ1 181 aa20.21■□□□□ 0.83
CPNE1-216ENST00000437340 TYMSP04818 313 aa20.21■□□□□ 0.83
CPNE1-216ENST00000437340 NBEAP1P0C6P0 100 aa20.21■□□□□ 0.83
CPNE1-216ENST00000437340 KLK9Q2XQG4 91 aa20.21■□□□□ 0.83
CPNE1-216ENST00000437340 CDC42EP3Q9UKI2 254 aa20.21■□□□□ 0.83
CPNE1-216ENST00000437340 KLK9Q9UKQ9 250 aa20.21■□□□□ 0.83
CPNE1-216ENST00000437340 GNG7O60262 68 aa20.21■□□□□ 0.83
CPNE1-216ENST00000437340 HIST1H1BP16401 226 aaKnown RBP20.21■□□□□ 0.83
CPNE1-216ENST00000437340 HNF1AP20823 631 aa20.2■□□□□ 0.82
CPNE1-216ENST00000437340 FAM3BP58499 235 aaPredicted RBP20.2■□□□□ 0.82
CPNE1-216ENST00000437340 FABP9Q0Z7S8 132 aa20.2■□□□□ 0.82
CPNE1-216ENST00000437340 IGF2BP2-AS1Q96M15 143 aa20.2■□□□□ 0.82
CPNE1-216ENST00000437340 TMEM68Q96MH6 324 aa20.2■□□□□ 0.82
CPNE1-216ENST00000437340 POLQO75417 2590 aa20.2■□□□□ 0.82
CPNE1-216ENST00000437340 ABCA12Q86UK0 2595 aa20.2■□□□□ 0.82
CPNE1-216ENST00000437340 PHOX2AO14813 284 aa20.19■□□□□ 0.82
CPNE1-216ENST00000437340 AKR1D1P51857 326 aa20.19■□□□□ 0.82
CPNE1-216ENST00000437340 FAM110DQ8TAY7 271 aaPredicted RBP20.19■□□□□ 0.82
CPNE1-216ENST00000437340 HSPB9Q9BQS6 159 aa20.19■□□□□ 0.82
CPNE1-216ENST00000437340 C21orf62Q9NYP8 219 aa20.19■□□□□ 0.82
CPNE1-216ENST00000437340 ABCA2Q9BZC7 2435 aa20.19■□□□□ 0.82
CPNE1-216ENST00000437340 PEX7O00628 323 aa20.18■□□□□ 0.82
CPNE1-216ENST00000437340 HIST1H2BKO60814 126 aa20.18■□□□□ 0.82
CPNE1-216ENST00000437340 HIST1H2BJP06899 126 aa20.18■□□□□ 0.82
CPNE1-216ENST00000437340 HIST1H2BOP23527 126 aa20.18■□□□□ 0.82
CPNE1-216ENST00000437340 FCGR2BP31994 310 aaPredicted RBP20.18■□□□□ 0.82
CPNE1-216ENST00000437340 HIST1H2BBP33778 126 aa20.18■□□□□ 0.82
CPNE1-216ENST00000437340 CNN1P51911 297 aaKnown RBP20.18■□□□□ 0.82
CPNE1-216ENST00000437340 HIST1H2BDP58876 126 aa20.18■□□□□ 0.82
CPNE1-216ENST00000437340 HIST1H2BCP62807 126 aa20.18■□□□□ 0.82
CPNE1-216ENST00000437340 HIST2H2BEQ16778 126 aa20.18■□□□□ 0.82
CPNE1-216ENST00000437340 HIST2H2BFQ5QNW6 126 aaPredicted RBP20.18■□□□□ 0.82
CPNE1-216ENST00000437340 S100A7AQ86SG5 101 aa20.18■□□□□ 0.82
CPNE1-216ENST00000437340 ZNF491Q8N8L2 437 aa20.18■□□□□ 0.82
CPNE1-216ENST00000437340 TMEM190Q8WZ59 177 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms