RNA–Protein interactions for RNA: ENST00000437025.6

GABRA1-204, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-204ENST00000437025 SLC25A48Q6ZT89 311 aaKnown RBP8.69□□□□□ -1.02
GABRA1-204ENST00000437025 TMEM106BQ9NUM4 274 aa8.69□□□□□ -1.02
GABRA1-204ENST00000437025 LINC00312Q9Y6C7 94 aa8.69□□□□□ -1.02
GABRA1-204ENST00000437025 COL27A1Q8IZC6 1860 aaPredicted RBP8.69□□□□□ -1.02
GABRA1-204ENST00000437025 ZNF253O75346 499 aa8.69□□□□□ -1.02
GABRA1-204ENST00000437025 CFHR2P36980 270 aa8.69□□□□□ -1.02
GABRA1-204ENST00000437025 UBE2G1P62253 170 aa8.69□□□□□ -1.02
GABRA1-204ENST00000437025 IBA57Q5T440 356 aaKnown RBP8.69□□□□□ -1.02
GABRA1-204ENST00000437025 C10orf113Q5VZT2 155 aa8.69□□□□□ -1.02
GABRA1-204ENST00000437025 GTSF1LQ9H1H1 148 aa8.69□□□□□ -1.02
GABRA1-204ENST00000437025 IL36BQ9NZH7 164 aa8.69□□□□□ -1.02
GABRA1-204ENST00000437025 LSM4Q9Y4Z0 139 aaKnown RBP8.69□□□□□ -1.02
GABRA1-204ENST00000437025 SMG1Q96Q15 3661 aaKnown RBP8.68□□□□□ -1.02
GABRA1-204ENST00000437025 FAM90A9PA6NNJ1 464 aa8.68□□□□□ -1.02
GABRA1-204ENST00000437025 SLC25A5P05141 298 aaKnown RBP8.68□□□□□ -1.02
GABRA1-204ENST00000437025 VMA21Q3ZAQ7 101 aa8.68□□□□□ -1.02
GABRA1-204ENST00000437025 MUC15Q8N387 334 aa8.68□□□□□ -1.02
GABRA1-204ENST00000437025 SIGLECL1Q8N7X8 197 aa8.68□□□□□ -1.02
GABRA1-204ENST00000437025 FAM169BQ8N8A8 192 aa8.68□□□□□ -1.02
GABRA1-204ENST00000437025 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.68□□□□□ -1.02
GABRA1-204ENST00000437025 LINC01560Q8TB33 94 aa8.68□□□□□ -1.02
GABRA1-204ENST00000437025 PAXXQ9BUH6 204 aa8.68□□□□□ -1.02
GABRA1-204ENST00000437025 ZNF331Q9NQX6 463 aaPredicted RBP8.68□□□□□ -1.02
GABRA1-204ENST00000437025 ZNF835Q9Y2P0 537 aa8.68□□□□□ -1.02
GABRA1-204ENST00000437025 S4R3C0 116 aa8.68□□□□□ -1.02
GABRA1-204ENST00000437025 TACC2O95359 2948 aa8.68□□□□□ -1.02
GABRA1-204ENST00000437025 FAM87AP0C7U9 286 aa8.68□□□□□ -1.02
GABRA1-204ENST00000437025 RNASE2P10153 161 aaKnown RBP8.68□□□□□ -1.02
GABRA1-204ENST00000437025 SUB1P53999 127 aaKnown RBP eCLIP8.68□□□□□ -1.02
GABRA1-204ENST00000437025 TPPP2P59282 170 aa8.68□□□□□ -1.02
GABRA1-204ENST00000437025 C1orf159Q96HA4 380 aa8.68□□□□□ -1.02
GABRA1-204ENST00000437025 GGTLC3B5MD39 225 aa8.68□□□□□ -1.02
GABRA1-204ENST00000437025 DLL1O00548 723 aa8.68□□□□□ -1.02
GABRA1-204ENST00000437025 LY6HO94772 140 aa8.68□□□□□ -1.02
GABRA1-204ENST00000437025 CD69Q07108 199 aa8.68□□□□□ -1.02
GABRA1-204ENST00000437025 FBLN7Q53RD9 439 aa8.68□□□□□ -1.02
GABRA1-204ENST00000437025 GBGT1Q8N5D6 347 aa8.68□□□□□ -1.02
GABRA1-204ENST00000437025 KIR3DL3Q8N743 410 aa8.68□□□□□ -1.02
GABRA1-204ENST00000437025 CD24P25063 80 aa8.67□□□□□ -1.02
GABRA1-204ENST00000437025 OR4C13Q8NGP0 309 aa8.67□□□□□ -1.02
GABRA1-204ENST00000437025 OR5B3Q8NH48 314 aa8.67□□□□□ -1.02
GABRA1-204ENST00000437025 KALRNO60229 2985 aa8.67□□□□□ -1.02
GABRA1-204ENST00000437025 PRSS46E5RG02 174 aa8.67□□□□□ -1.02
GABRA1-204ENST00000437025 H0YJW9 148 aa8.67□□□□□ -1.02
GABRA1-204ENST00000437025 MFAP2P55001 183 aa8.67□□□□□ -1.02
GABRA1-204ENST00000437025 COX19Q49B96 90 aa8.67□□□□□ -1.02
GABRA1-204ENST00000437025 SAP30O75446 220 aa8.67□□□□□ -1.02
GABRA1-204ENST00000437025 GCGP01275 180 aa8.67□□□□□ -1.02
GABRA1-204ENST00000437025 RBP4P02753 201 aa8.67□□□□□ -1.02
GABRA1-204ENST00000437025 CGB3P0DN86 165 aa8.67□□□□□ -1.02
GABRA1-204ENST00000437025 CGB7P0DN87 165 aa8.67□□□□□ -1.02
GABRA1-204ENST00000437025 SRIP30626 198 aa8.67□□□□□ -1.02
GABRA1-204ENST00000437025 LYZP61626 148 aa8.67□□□□□ -1.02
GABRA1-204ENST00000437025 HES1Q14469 280 aa8.67□□□□□ -1.02
GABRA1-204ENST00000437025 PRSS57Q6UWY2 283 aa8.67□□□□□ -1.02
GABRA1-204ENST00000437025 ZNF439Q8NDP4 499 aa8.67□□□□□ -1.02
GABRA1-204ENST00000437025 ONECUT1Q9UBC0 465 aa8.67□□□□□ -1.02
GABRA1-204ENST00000437025 AMMECR1Q9Y4X0 333 aaPredicted RBP8.67□□□□□ -1.02
GABRA1-204ENST00000437025 FAM19A2Q8N3H0 131 aa8.66□□□□□ -1.02
GABRA1-204ENST00000437025 OR5R1Q8NH85 324 aa8.66□□□□□ -1.02
GABRA1-204ENST00000437025 TXNDC17Q9BRA2 123 aa8.66□□□□□ -1.02
GABRA1-204ENST00000437025 ZNF586Q9NXT0 402 aa8.66□□□□□ -1.02
GABRA1-204ENST00000437025 WASHC3Q9Y3C0 194 aa8.66□□□□□ -1.02
GABRA1-204ENST00000437025 CNTFRP26992 372 aa8.66□□□□□ -1.02
GABRA1-204ENST00000437025 PRR20EP86478 221 aa8.66□□□□□ -1.02
GABRA1-204ENST00000437025 PRR20CP86479 221 aa8.66□□□□□ -1.02
GABRA1-204ENST00000437025 PRR20DP86480 221 aa8.66□□□□□ -1.02
GABRA1-204ENST00000437025 PRR20BP86481 221 aa8.66□□□□□ -1.02
GABRA1-204ENST00000437025 PRR20AP86496 221 aa8.66□□□□□ -1.02
GABRA1-204ENST00000437025 MTURNQ8N3F0 131 aa8.66□□□□□ -1.02
GABRA1-204ENST00000437025 OSR1Q8TAX0 266 aaPredicted RBP8.66□□□□□ -1.02
GABRA1-204ENST00000437025 INSIG2Q9Y5U4 225 aa8.66□□□□□ -1.02
GABRA1-204ENST00000437025 K7EP13 123 aa8.66□□□□□ -1.02
GABRA1-204ENST00000437025 CD99P14209 185 aa8.66□□□□□ -1.02
GABRA1-204ENST00000437025 USF1P22415 310 aaPredicted RBP8.66□□□□□ -1.02
GABRA1-204ENST00000437025 WT1-ASQ06250 92 aa8.66□□□□□ -1.02
GABRA1-204ENST00000437025 FOXL1Q12952 345 aa8.66□□□□□ -1.02
GABRA1-204ENST00000437025 LINC00305Q7Z4B0 112 aa8.66□□□□□ -1.02
GABRA1-204ENST00000437025 ATOH7Q8N100 152 aa8.66□□□□□ -1.02
GABRA1-204ENST00000437025 RITA1Q96K30 269 aa8.66□□□□□ -1.02
GABRA1-204ENST00000437025 AP1S3Q96PC3 154 aa8.66□□□□□ -1.02
GABRA1-204ENST00000437025 COL25A1Q9BXS0 654 aaPredicted RBP8.66□□□□□ -1.02
GABRA1-204ENST00000437025 RAB1BQ9H0U4 201 aa8.66□□□□□ -1.02
GABRA1-204ENST00000437025 TNFRSF19Q9NS68 423 aa8.66□□□□□ -1.02
GABRA1-204ENST00000437025 GATA4P43694 442 aa8.65□□□□□ -1.02
GABRA1-204ENST00000437025 HNRNPA3P51991 378 aaKnown RBP8.65□□□□□ -1.02
GABRA1-204ENST00000437025 RPL15P61313 204 aaKnown RBP8.65□□□□□ -1.02
GABRA1-204ENST00000437025 VSTM2AQ8TAG5 236 aa8.65□□□□□ -1.02
GABRA1-204ENST00000437025 PGPA6NDG6 321 aa8.65□□□□□ -1.02
GABRA1-204ENST00000437025 TMEM178BH3BS89 294 aa8.65□□□□□ -1.02
GABRA1-204ENST00000437025 AREGP15514 252 aa8.65□□□□□ -1.02
GABRA1-204ENST00000437025 GPR6P46095 362 aaPredicted RBP8.65□□□□□ -1.02
GABRA1-204ENST00000437025 ASCL2Q99929 193 aa8.65□□□□□ -1.02
GABRA1-204ENST00000437025 FNDC4Q9H6D8 234 aaPredicted RBP8.65□□□□□ -1.02
GABRA1-204ENST00000437025 HILPDAQ9Y5L2 63 aa8.65□□□□□ -1.02
GABRA1-204ENST00000437025 PDPNQ86YL7 162 aa8.65□□□□□ -1.03
GABRA1-204ENST00000437025 OR1N2Q8NGR9 330 aa8.65□□□□□ -1.03
GABRA1-204ENST00000437025 RNASE6Q93091 150 aaKnown RBP8.65□□□□□ -1.03
GABRA1-204ENST00000437025 RPEQ96AT9 228 aa8.65□□□□□ -1.03
GABRA1-204ENST00000437025 SLC25A33Q9BSK2 321 aa8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms