RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 RCVRNP35243 200 aa10.39□□□□□ -0.75
HDAC8-213ENST00000436675 ID1P41134 155 aa10.39□□□□□ -0.75
HDAC8-213ENST00000436675 HTR2BP41595 481 aa10.39□□□□□ -0.75
HDAC8-213ENST00000436675 KRTAP10-2P60368 255 aa10.39□□□□□ -0.75
HDAC8-213ENST00000436675 RND3P61587 244 aa10.39□□□□□ -0.75
HDAC8-213ENST00000436675 RNASE12Q5GAN4 147 aaKnown RBP10.39□□□□□ -0.75
HDAC8-213ENST00000436675 FAM78BQ5VT40 261 aa10.39□□□□□ -0.75
HDAC8-213ENST00000436675 SCPEP1Q9HB40 452 aa10.39□□□□□ -0.75
HDAC8-213ENST00000436675 KLK11Q9UBX7 282 aa10.39□□□□□ -0.75
HDAC8-213ENST00000436675 ZNF705GA8MUZ8 300 aaPredicted RBP10.38□□□□□ -0.75
HDAC8-213ENST00000436675 SPCS3P61009 180 aa10.38□□□□□ -0.75
HDAC8-213ENST00000436675 FCN2Q15485 313 aa10.38□□□□□ -0.75
HDAC8-213ENST00000436675 NEDD8Q15843 81 aa10.38□□□□□ -0.75
HDAC8-213ENST00000436675 ZNF79Q15937 498 aa10.38□□□□□ -0.75
HDAC8-213ENST00000436675 EBLN2Q6P2I7 272 aa10.38□□□□□ -0.75
HDAC8-213ENST00000436675 LINC00588Q9Y4M8 146 aa10.38□□□□□ -0.75
HDAC8-213ENST00000436675 CEBPZOSA8MTT3 80 aa10.37□□□□□ -0.75
HDAC8-213ENST00000436675 EPM2AB3EWF7 344 aa10.37□□□□□ -0.75
HDAC8-213ENST00000436675 RPS19P39019 145 aaKnown RBP10.37□□□□□ -0.75
HDAC8-213ENST00000436675 PSMB3P49720 205 aa10.37□□□□□ -0.75
HDAC8-213ENST00000436675 CCL18P55774 89 aa10.37□□□□□ -0.75
HDAC8-213ENST00000436675 DLK1P80370 383 aa10.37□□□□□ -0.75
HDAC8-213ENST00000436675 C2orf83Q53S99 150 aa10.37□□□□□ -0.75
HDAC8-213ENST00000436675 SLC24A4Q8NFF2 622 aa10.37□□□□□ -0.75
HDAC8-213ENST00000436675 RNASEH2CQ8TDP1 164 aaKnown RBP10.37□□□□□ -0.75
HDAC8-213ENST00000436675 TMEM170AQ8WVE7 144 aa10.37□□□□□ -0.75
HDAC8-213ENST00000436675 GPR146Q96CH1 333 aa10.37□□□□□ -0.75
HDAC8-213ENST00000436675 RNF125Q96EQ8 232 aa10.37□□□□□ -0.75
HDAC8-213ENST00000436675 RAB26Q9ULW5 256 aa10.37□□□□□ -0.75
HDAC8-213ENST00000436675 SRRM2Q9UQ35 2752 aaKnown RBP10.37□□□□□ -0.75
HDAC8-213ENST00000436675 A0A0J9YX75 114 aa10.36□□□□□ -0.75
HDAC8-213ENST00000436675 SOCS3O14543 225 aa10.36□□□□□ -0.75
HDAC8-213ENST00000436675 LSM3P62310 102 aaKnown RBP10.36□□□□□ -0.75
HDAC8-213ENST00000436675 CROCCP3Q8IVE0 287 aa10.36□□□□□ -0.75
HDAC8-213ENST00000436675 ZNF486Q96H40 463 aaPredicted RBP10.36□□□□□ -0.75
HDAC8-213ENST00000436675 CLUHP3Q96NS8 147 aa10.36□□□□□ -0.75
HDAC8-213ENST00000436675 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.36□□□□□ -0.75
HDAC8-213ENST00000436675 COPZ2Q9P299 210 aa10.36□□□□□ -0.75
HDAC8-213ENST00000436675 SMIM31A0A1B0GVY4 71 aa10.35□□□□□ -0.75
HDAC8-213ENST00000436675 TMEM127O75204 238 aa10.35□□□□□ -0.75
HDAC8-213ENST00000436675 INAFM2P0DMQ5 153 aa10.35□□□□□ -0.75
HDAC8-213ENST00000436675 ELK1P19419 428 aa10.35□□□□□ -0.75
HDAC8-213ENST00000436675 CLINT1Q14677 625 aa10.35□□□□□ -0.75
HDAC8-213ENST00000436675 ETFRF1Q6IPR1 90 aa10.35□□□□□ -0.75
HDAC8-213ENST00000436675 C20orf173Q96LM9 149 aa10.35□□□□□ -0.75
HDAC8-213ENST00000436675 KRTAP1-5Q9BYS1 174 aa10.35□□□□□ -0.75
HDAC8-213ENST00000436675 COMMD3Q9UBI1 195 aa10.35□□□□□ -0.75
HDAC8-213ENST00000436675 CACNG5Q9UF02 275 aa10.35□□□□□ -0.75
HDAC8-213ENST00000436675 FAT1Q14517 4588 aa10.34□□□□□ -0.75
HDAC8-213ENST00000436675 LYRM9A8MSI8 78 aa10.34□□□□□ -0.75
HDAC8-213ENST00000436675 UCP1P25874 307 aa10.34□□□□□ -0.75
HDAC8-213ENST00000436675 ALDH3B2P48448 385 aa10.34□□□□□ -0.75
HDAC8-213ENST00000436675 PAX9P55771 341 aa10.34□□□□□ -0.75
HDAC8-213ENST00000436675 LYZP61626 148 aa10.34□□□□□ -0.75
HDAC8-213ENST00000436675 MEF2DQ14814 521 aa10.34□□□□□ -0.75
HDAC8-213ENST00000436675 SPATA31B1PQ5VZV4 182 aa10.34□□□□□ -0.75
HDAC8-213ENST00000436675 SSX7Q7RTT5 188 aa10.34□□□□□ -0.75
HDAC8-213ENST00000436675 LHFPL1Q86WI0 220 aa10.34□□□□□ -0.75
HDAC8-213ENST00000436675 LHFPL5Q8TAF8 219 aa10.34□□□□□ -0.75
HDAC8-213ENST00000436675 RNF141Q8WVD5 230 aa10.34□□□□□ -0.75
HDAC8-213ENST00000436675 PPP1R14BQ96C90 147 aa10.34□□□□□ -0.75
HDAC8-213ENST00000436675 IGF2BP2-AS1Q96M15 143 aa10.34□□□□□ -0.75
HDAC8-213ENST00000436675 UHRF2Q96PU4 802 aa10.34□□□□□ -0.75
HDAC8-213ENST00000436675 FLG2Q5D862 2391 aaPredicted RBP10.33□□□□□ -0.76
HDAC8-213ENST00000436675 M0R2Z0 102 aa10.33□□□□□ -0.76
HDAC8-213ENST00000436675 AZU1P20160 251 aa10.33□□□□□ -0.76
HDAC8-213ENST00000436675 FUSP35637 526 aaKnown RBP eCLIP10.33□□□□□ -0.76
HDAC8-213ENST00000436675 NUP62P37198 522 aaPredicted RBP10.33□□□□□ -0.76
HDAC8-213ENST00000436675 ZNF90Q03938 601 aa10.33□□□□□ -0.76
HDAC8-213ENST00000436675 SPINK13Q1W4C9 94 aa10.33□□□□□ -0.76
HDAC8-213ENST00000436675 RNASE10Q5GAN6 216 aaKnown RBP10.33□□□□□ -0.76
HDAC8-213ENST00000436675 CCDC71LQ8N9Z2 235 aa10.33□□□□□ -0.76
HDAC8-213ENST00000436675 OR13C8Q8NGS7 320 aa10.33□□□□□ -0.76
HDAC8-213ENST00000436675 OR52E5Q8NH55 327 aa10.33□□□□□ -0.76
HDAC8-213ENST00000436675 C16orf92Q96LL3 132 aa10.33□□□□□ -0.76
HDAC8-213ENST00000436675 Q9H8V8 135 aa10.33□□□□□ -0.76
HDAC8-213ENST00000436675 RPRMQ9NS64 109 aa10.33□□□□□ -0.76
HDAC8-213ENST00000436675 DOK5Q9P104 306 aa10.33□□□□□ -0.76
HDAC8-213ENST00000436675 PFDN2Q9UHV9 154 aa10.33□□□□□ -0.76
HDAC8-213ENST00000436675 VPS13BQ7Z7G8 4022 aa10.33□□□□□ -0.76
HDAC8-213ENST00000436675 ZFP92A6NM28 416 aa10.32□□□□□ -0.76
HDAC8-213ENST00000436675 ISLRO14498 428 aa10.32□□□□□ -0.76
HDAC8-213ENST00000436675 CD3DP04234 171 aa10.32□□□□□ -0.76
HDAC8-213ENST00000436675 ATP5G1P05496 136 aa10.32□□□□□ -0.76
HDAC8-213ENST00000436675 OR5AC1P0C628 307 aa10.32□□□□□ -0.76
HDAC8-213ENST00000436675 ATP5G3P48201 142 aa10.32□□□□□ -0.76
HDAC8-213ENST00000436675 SUPT4H1P63272 117 aaKnown RBP10.32□□□□□ -0.76
HDAC8-213ENST00000436675 OR2F1Q13607 317 aa10.32□□□□□ -0.76
HDAC8-213ENST00000436675 SCGB2B2Q4G0G5 96 aa10.32□□□□□ -0.76
HDAC8-213ENST00000436675 OR8G2PQ6IF36 304 aa10.32□□□□□ -0.76
HDAC8-213ENST00000436675 AMTNQ6UX39 209 aa10.32□□□□□ -0.76
HDAC8-213ENST00000436675 OR8I2Q8N0Y5 310 aa10.32□□□□□ -0.76
HDAC8-213ENST00000436675 OR4C16Q8NGL9 310 aa10.32□□□□□ -0.76
HDAC8-213ENST00000436675 ZFAND1Q8TCF1 268 aa10.32□□□□□ -0.76
HDAC8-213ENST00000436675 ABHD1Q96SE0 405 aa10.32□□□□□ -0.76
HDAC8-213ENST00000436675 MYCBP2O75592 4640 aa10.31□□□□□ -0.76
HDAC8-213ENST00000436675 KLF9Q13886 244 aaPredicted RBP10.31□□□□□ -0.76
HDAC8-213ENST00000436675 AARDQ4LEZ3 155 aa10.31□□□□□ -0.76
HDAC8-213ENST00000436675 FAM219AQ8IW50 185 aa10.31□□□□□ -0.76
HDAC8-213ENST00000436675 SELENOHQ8IZQ5 122 aaKnown RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms