RNA–Protein interactions for RNA: ENST00000436439.6

HMGCL-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2 BASIC

Gene HMGCL, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-204ENST00000436439 IFNA1P01562 189 aa8.5□□□□□ -1.05
HMGCL-204ENST00000436439 PF4P02776 101 aa8.5□□□□□ -1.05
HMGCL-204ENST00000436439 NPBWR1P48145 328 aa8.5□□□□□ -1.05
HMGCL-204ENST00000436439 MFAP2P55001 183 aa8.5□□□□□ -1.05
HMGCL-204ENST00000436439 C9orf152Q5JTZ5 239 aa8.5□□□□□ -1.05
HMGCL-204ENST00000436439 SLC35E3Q7Z769 313 aa8.5□□□□□ -1.05
HMGCL-204ENST00000436439 OR10G4Q8NGN3 311 aa8.5□□□□□ -1.05
HMGCL-204ENST00000436439 NPCDR1Q9BY65 106 aa8.5□□□□□ -1.05
HMGCL-204ENST00000436439 NPVFQ9HCQ7 196 aa8.5□□□□□ -1.05
HMGCL-204ENST00000436439 KCNIP2Q9NS61 270 aa8.5□□□□□ -1.05
HMGCL-204ENST00000436439 COL7A1Q02388 2944 aa8.5□□□□□ -1.05
HMGCL-204ENST00000436439 IGLV11-55A0A075B6I3 123 aa8.49□□□□□ -1.05
HMGCL-204ENST00000436439 CTXND1A0A1B0GTU2 59 aa8.49□□□□□ -1.05
HMGCL-204ENST00000436439 LOC102723971A0A1B0GUV8 181 aa8.49□□□□□ -1.05
HMGCL-204ENST00000436439 A0A1B0GV50 99 aa8.49□□□□□ -1.05
HMGCL-204ENST00000436439 WI2-2373I1.2A0A1W2PRP0 233 aa8.49□□□□□ -1.05
HMGCL-204ENST00000436439 MAP1LC3B2A6NCE7 125 aa8.49□□□□□ -1.05
HMGCL-204ENST00000436439 LINC01548A6NM66 108 aa8.49□□□□□ -1.05
HMGCL-204ENST00000436439 AP4M1O00189 453 aa8.49□□□□□ -1.05
HMGCL-204ENST00000436439 NDUFS6O75380 124 aaKnown RBP8.49□□□□□ -1.05
HMGCL-204ENST00000436439 SRP19P09132 144 aaKnown RBP8.49□□□□□ -1.05
HMGCL-204ENST00000436439 APELAP0DMC3 54 aa8.49□□□□□ -1.05
HMGCL-204ENST00000436439 DEFA4P12838 97 aa8.49□□□□□ -1.05
HMGCL-204ENST00000436439 HIST1H1BP16401 226 aaKnown RBP8.49□□□□□ -1.05
HMGCL-204ENST00000436439 TAGLN2P37802 199 aaKnown RBP8.49□□□□□ -1.05
HMGCL-204ENST00000436439 ELLP55199 621 aaPredicted RBP8.49□□□□□ -1.05
HMGCL-204ENST00000436439 ICAM4Q14773 271 aa8.49□□□□□ -1.05
HMGCL-204ENST00000436439 ZNF726P1Q15940 193 aa8.49□□□□□ -1.05
HMGCL-204ENST00000436439 KHDC1LQ5JSQ8 128 aa8.49□□□□□ -1.05
HMGCL-204ENST00000436439 SOHLH1Q5JUK2 328 aa8.49□□□□□ -1.05
HMGCL-204ENST00000436439 FFAR4Q5NUL3 377 aa8.49□□□□□ -1.05
HMGCL-204ENST00000436439 UNQ5815/PRO19632Q6UWF5 114 aa8.49□□□□□ -1.05
HMGCL-204ENST00000436439 C18orf65Q6ZTR6 163 aa8.49□□□□□ -1.05
HMGCL-204ENST00000436439 OR4X2Q8NGF9 303 aa8.49□□□□□ -1.05
HMGCL-204ENST00000436439 RARRES2Q99969 163 aa8.49□□□□□ -1.05
HMGCL-204ENST00000436439 ACTR3CQ9C0K3 210 aaPredicted RBP8.49□□□□□ -1.05
HMGCL-204ENST00000436439 MAP1LC3BQ9GZQ8 125 aa8.49□□□□□ -1.05
HMGCL-204ENST00000436439 FNDC4Q9H6D8 234 aaPredicted RBP8.49□□□□□ -1.05
HMGCL-204ENST00000436439 VSIRQ9H7M9 311 aa8.49□□□□□ -1.05
HMGCL-204ENST00000436439 SLC39A9Q9NUM3 307 aa8.49□□□□□ -1.05
HMGCL-204ENST00000436439 LSM4Q9Y4Z0 139 aaKnown RBP8.49□□□□□ -1.05
HMGCL-204ENST00000436439 DMRT1Q9Y5R6 373 aa8.49□□□□□ -1.05
HMGCL-204ENST00000436439 DNAH9Q9NYC9 4486 aa8.49□□□□□ -1.05
HMGCL-204ENST00000436439 TRAV41A0A0B4J266 112 aa8.48□□□□□ -1.05
HMGCL-204ENST00000436439 H3BUA1 57 aa8.48□□□□□ -1.05
HMGCL-204ENST00000436439 I3L2K1 104 aa8.48□□□□□ -1.05
HMGCL-204ENST00000436439 NUPL2O15504 423 aaKnown RBP8.48□□□□□ -1.05
HMGCL-204ENST00000436439 BCL2P10415 239 aa8.48□□□□□ -1.05
HMGCL-204ENST00000436439 HOXD3P31249 432 aaPredicted RBP8.48□□□□□ -1.05
HMGCL-204ENST00000436439 OPRK1P41145 380 aa8.48□□□□□ -1.05
HMGCL-204ENST00000436439 GAMTQ14353 236 aa8.48□□□□□ -1.05
HMGCL-204ENST00000436439 RHEBQ15382 184 aa8.48□□□□□ -1.05
HMGCL-204ENST00000436439 HAGHQ16775 308 aa8.48□□□□□ -1.05
HMGCL-204ENST00000436439 ACOT6Q3I5F7 207 aaPredicted RBP8.48□□□□□ -1.05
HMGCL-204ENST00000436439 ACSM6Q6P461 480 aa8.48□□□□□ -1.05
HMGCL-204ENST00000436439 SLC16A13Q7RTY0 426 aa8.48□□□□□ -1.05
HMGCL-204ENST00000436439 TMEM144Q7Z5S9 345 aa8.48□□□□□ -1.05
HMGCL-204ENST00000436439 ZNF329Q86UD4 541 aa8.48□□□□□ -1.05
HMGCL-204ENST00000436439 LINC00482Q8N8I6 264 aa8.48□□□□□ -1.05
HMGCL-204ENST00000436439 TMEM116Q8NCL8 245 aa8.48□□□□□ -1.05
HMGCL-204ENST00000436439 NOL4LQ96MY1 436 aaPredicted RBP8.48□□□□□ -1.05
HMGCL-204ENST00000436439 FANCD2OSQ96PS1 177 aa8.48□□□□□ -1.05
HMGCL-204ENST00000436439 SMCO4Q9NRQ5 59 aa8.48□□□□□ -1.05
HMGCL-204ENST00000436439 THYN1Q9P016 225 aa8.48□□□□□ -1.05
HMGCL-204ENST00000436439 LINC00527Q9UJ94 153 aa8.48□□□□□ -1.05
HMGCL-204ENST00000436439 TRBV9A0A0B4J1U6 114 aa8.48□□□□□ -1.05
HMGCL-204ENST00000436439 PSMB11A5LHX3 300 aa8.48□□□□□ -1.05
HMGCL-204ENST00000436439 PPIFP30405 207 aaKnown RBP8.48□□□□□ -1.05
HMGCL-204ENST00000436439 ECSCRQ19T08 205 aa8.48□□□□□ -1.05
HMGCL-204ENST00000436439 TEPPQ6URK8 271 aa8.48□□□□□ -1.05
HMGCL-204ENST00000436439 LCN15Q6UWW0 184 aa8.48□□□□□ -1.05
HMGCL-204ENST00000436439 RPP25LQ8N5L8 163 aaKnown RBP8.48□□□□□ -1.05
HMGCL-204ENST00000436439 OR10G9Q8NGN4 311 aa8.48□□□□□ -1.05
HMGCL-204ENST00000436439 OR10G7Q8NGN6 311 aa8.48□□□□□ -1.05
HMGCL-204ENST00000436439 RXFP4Q8TDU9 374 aa8.48□□□□□ -1.05
HMGCL-204ENST00000436439 MISP3Q96FF7 219 aa8.48□□□□□ -1.05
HMGCL-204ENST00000436439 SLC35E1Q96K37 410 aa8.48□□□□□ -1.05
HMGCL-204ENST00000436439 GNG13Q9P2W3 67 aa8.48□□□□□ -1.05
HMGCL-204ENST00000436439 VAX2Q9UIW0 290 aa8.48□□□□□ -1.05
HMGCL-204ENST00000436439 KMT2CQ8NEZ4 4911 aaKnown RBP8.47□□□□□ -1.05
HMGCL-204ENST00000436439 LOC105371267A0A1B0GV96 52 aa8.47□□□□□ -1.05
HMGCL-204ENST00000436439 SEC14L6B5MCN3 397 aa8.47□□□□□ -1.05
HMGCL-204ENST00000436439 G3V318 75 aa8.47□□□□□ -1.05
HMGCL-204ENST00000436439 K7EIM0 57 aa8.47□□□□□ -1.05
HMGCL-204ENST00000436439 MT-CO2P00403 227 aa8.47□□□□□ -1.05
HMGCL-204ENST00000436439 ATF4P18848 351 aaPredicted RBP8.47□□□□□ -1.05
HMGCL-204ENST00000436439 CFHR3Q02985 330 aa8.47□□□□□ -1.05
HMGCL-204ENST00000436439 EGFEM1PQ0D2K5 195 aa8.47□□□□□ -1.05
HMGCL-204ENST00000436439 MLANAQ16655 118 aa8.47□□□□□ -1.05
HMGCL-204ENST00000436439 DEFB121Q5J5C9 76 aa8.47□□□□□ -1.05
HMGCL-204ENST00000436439 TMEM88Q6PEY1 159 aa8.47□□□□□ -1.05
HMGCL-204ENST00000436439 C19orf35Q6ZS72 473 aa8.47□□□□□ -1.05
HMGCL-204ENST00000436439 SSX7Q7RTT5 188 aa8.47□□□□□ -1.05
HMGCL-204ENST00000436439 CBLN2Q8IUK8 224 aa8.47□□□□□ -1.05
HMGCL-204ENST00000436439 THAP8Q8NA92 274 aa8.47□□□□□ -1.05
HMGCL-204ENST00000436439 OR5T1Q8NG75 326 aa8.47□□□□□ -1.05
HMGCL-204ENST00000436439 TUBA4BQ9H853 241 aa8.47□□□□□ -1.05
HMGCL-204ENST00000436439 IGKV1OR2-108A0A075B7D4 117 aa8.46□□□□□ -1.06
HMGCL-204ENST00000436439 SMCO3A2RU48 225 aa8.46□□□□□ -1.06
HMGCL-204ENST00000436439 C7orf77A4D0Y5 90 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms