RNA–Protein interactions for RNA: ENST00000435706.6

TOP2B-204, Transcript of DNA topoisomerase II beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TOP2B, Length 5,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-204ENST00000435706 TRAV12-3A0A0B4J271 114 aa18.54■□□□□ 0.56
TOP2B-204ENST00000435706 CLPSP04118 112 aa18.54■□□□□ 0.56
TOP2B-204ENST00000435706 OCIAD2Q56VL3 154 aa18.54■□□□□ 0.56
TOP2B-204ENST00000435706 TCRAP04437 139 aa18.53■□□□□ 0.56
TOP2B-204ENST00000435706 TMPRSS3P57727 454 aa18.53■□□□□ 0.56
TOP2B-204ENST00000435706 Q6ZRM9 215 aa18.53■□□□□ 0.56
TOP2B-204ENST00000435706 CACNA1DQ01668 2161 aa18.53■□□□□ 0.56
TOP2B-204ENST00000435706 TRBV6-6A0A0A6YYG2 114 aa18.53■□□□□ 0.56
TOP2B-204ENST00000435706 NBR2O15453 112 aa18.53■□□□□ 0.56
TOP2B-204ENST00000435706 TMEM42Q69YG0 159 aa18.53■□□□□ 0.56
TOP2B-204ENST00000435706 FDCSPQ8NFU4 85 aa18.53■□□□□ 0.56
TOP2B-204ENST00000435706 TRAV3A0A0B4J244 114 aa18.53■□□□□ 0.56
TOP2B-204ENST00000435706 IFI27P40305 119 aaPredicted RBP18.53■□□□□ 0.56
TOP2B-204ENST00000435706 LILRA1O75019 489 aa18.53■□□□□ 0.56
TOP2B-204ENST00000435706 CD300EQ496F6 205 aaPredicted RBP18.53■□□□□ 0.56
TOP2B-204ENST00000435706 Q6ZS49 121 aa18.53■□□□□ 0.56
TOP2B-204ENST00000435706 CST9LQ9H4G1 147 aa18.53■□□□□ 0.56
TOP2B-204ENST00000435706 AHCTF1Q8WYP5 2266 aa18.53■□□□□ 0.56
TOP2B-204ENST00000435706 LAGE3Q14657 143 aa18.52■□□□□ 0.56
TOP2B-204ENST00000435706 NUP37Q8NFH4 326 aa18.52■□□□□ 0.56
TOP2B-204ENST00000435706 TMEM101Q96IK0 257 aa18.52■□□□□ 0.56
TOP2B-204ENST00000435706 PSPNO60542 156 aa18.52■□□□□ 0.56
TOP2B-204ENST00000435706 TRBV7-9A0A0J9YWB2 115 aa18.52■□□□□ 0.56
TOP2B-204ENST00000435706 C15orf62A8K5M9 175 aa18.52■□□□□ 0.56
TOP2B-204ENST00000435706 MPDZO75970 2070 aa18.52■□□□□ 0.55
TOP2B-204ENST00000435706 FXYD7P58549 80 aa18.52■□□□□ 0.55
TOP2B-204ENST00000435706 PRB4P10163 310 aaPredicted RBP18.51■□□□□ 0.55
TOP2B-204ENST00000435706 ICE1Q9Y2F5 2266 aa18.51■□□□□ 0.55
TOP2B-204ENST00000435706 NPIPB5A8MRT5 1133 aa18.51■□□□□ 0.55
TOP2B-204ENST00000435706 C17orf100A8MU93 164 aa18.51■□□□□ 0.55
TOP2B-204ENST00000435706 EXOC3-AS1Q8N2X6 119 aa18.51■□□□□ 0.55
TOP2B-204ENST00000435706 ZNF138P52744 262 aa18.51■□□□□ 0.55
TOP2B-204ENST00000435706 KLF17Q5JT82 389 aaPredicted RBP18.51■□□□□ 0.55
TOP2B-204ENST00000435706 LYZL1Q6UWQ5 148 aa18.51■□□□□ 0.55
TOP2B-204ENST00000435706 ERG28Q9UKR5 140 aa18.51■□□□□ 0.55
TOP2B-204ENST00000435706 RNF182Q8N6D2 247 aa18.5■□□□□ 0.55
TOP2B-204ENST00000435706 MCRIP2Q9BUT9 160 aaKnown RBP18.5■□□□□ 0.55
TOP2B-204ENST00000435706 CNTFRP26992 372 aa18.5■□□□□ 0.55
TOP2B-204ENST00000435706 TNS1Q9HBL0 1735 aaKnown RBP18.5■□□□□ 0.55
TOP2B-204ENST00000435706 C10orf55Q5SWW7 151 aa18.5■□□□□ 0.55
TOP2B-204ENST00000435706 C9orf106Q8NAJ2 232 aa18.5■□□□□ 0.55
TOP2B-204ENST00000435706 TMEM133Q9H2Q1 129 aa18.5■□□□□ 0.55
TOP2B-204ENST00000435706 IGHV3OR16-10A0A075B7F0 116 aa18.49■□□□□ 0.55
TOP2B-204ENST00000435706 PRTN3P24158 256 aa18.49■□□□□ 0.55
TOP2B-204ENST00000435706 PLNP26678 52 aa18.49■□□□□ 0.55
TOP2B-204ENST00000435706 FOXG1P55316 489 aaPredicted RBP18.49■□□□□ 0.55
TOP2B-204ENST00000435706 YAE1D1Q9NRH1 226 aa18.49■□□□□ 0.55
TOP2B-204ENST00000435706 DOCK3Q8IZD9 2030 aa18.49■□□□□ 0.55
TOP2B-204ENST00000435706 TMEM190Q8WZ59 177 aa18.49■□□□□ 0.55
TOP2B-204ENST00000435706 GFRA3O60609 400 aa18.49■□□□□ 0.55
TOP2B-204ENST00000435706 BSPH1Q075Z2 132 aa18.49■□□□□ 0.55
TOP2B-204ENST00000435706 LINC00473A8K010 186 aa18.48■□□□□ 0.55
TOP2B-204ENST00000435706 PMS2P5A8MQ11 134 aa18.48■□□□□ 0.55
TOP2B-204ENST00000435706 TDGF1P13385 188 aa18.48■□□□□ 0.55
TOP2B-204ENST00000435706 TRAV21A0A0B4J279 112 aa18.48■□□□□ 0.55
TOP2B-204ENST00000435706 C9orf172C9J069 976 aa18.48■□□□□ 0.55
TOP2B-204ENST00000435706 DLX4Q92988 240 aaPredicted RBP18.48■□□□□ 0.55
TOP2B-204ENST00000435706 ADAMTSL5Q6ZMM2 481 aa18.47■□□□□ 0.55
TOP2B-204ENST00000435706 PRB3Q04118 309 aaPredicted RBP18.47■□□□□ 0.55
TOP2B-204ENST00000435706 SCRT1Q9BWW7 348 aa18.47■□□□□ 0.55
TOP2B-204ENST00000435706 IGLC2P0DOY2 106 aa18.47■□□□□ 0.55
TOP2B-204ENST00000435706 IGLC3P0DOY3 106 aa18.47■□□□□ 0.55
TOP2B-204ENST00000435706 GAGE1Q13065 139 aa18.47■□□□□ 0.55
TOP2B-204ENST00000435706 GGNQ86UU5 652 aa18.47■□□□□ 0.55
TOP2B-204ENST00000435706 TOMM7Q9P0U1 55 aa18.47■□□□□ 0.55
TOP2B-204ENST00000435706 CEP290O15078 2479 aa18.47■□□□□ 0.55
TOP2B-204ENST00000435706 IGKV2-40A0A087WW87 121 aaPredicted RBP18.46■□□□□ 0.55
TOP2B-204ENST00000435706 SMAD7O15105 426 aaKnown RBP18.46■□□□□ 0.55
TOP2B-204ENST00000435706 IGKV2D-40P01614 121 aaPredicted RBP18.46■□□□□ 0.55
TOP2B-204ENST00000435706 CD7P09564 240 aa18.46■□□□□ 0.55
TOP2B-204ENST00000435706 Q6ZWC4 215 aa18.46■□□□□ 0.55
TOP2B-204ENST00000435706 LSM4Q9Y4Z0 139 aaKnown RBP18.46■□□□□ 0.55
TOP2B-204ENST00000435706 SLC25A39Q9BZJ4 359 aaPredicted RBP18.46■□□□□ 0.55
TOP2B-204ENST00000435706 RPUSD1Q9UJJ7 312 aaKnown RBP18.46■□□□□ 0.55
TOP2B-204ENST00000435706 ANAPC10Q9UM13 185 aa18.46■□□□□ 0.55
TOP2B-204ENST00000435706 PINLYPA6NC86 204 aa18.46■□□□□ 0.55
TOP2B-204ENST00000435706 PSG3Q16557 428 aa18.46■□□□□ 0.55
TOP2B-204ENST00000435706 LINC01560Q8TB33 94 aa18.45■□□□□ 0.54
TOP2B-204ENST00000435706 DUX3Q96PT4 197 aa18.45■□□□□ 0.54
TOP2B-204ENST00000435706 RBMY1BA6NDE4 496 aaKnown RBP18.45■□□□□ 0.54
TOP2B-204ENST00000435706 RBMY1EA6NEQ0 496 aaKnown RBP18.45■□□□□ 0.54
TOP2B-204ENST00000435706 RBMY1DP0C7P1 496 aaKnown RBP18.45■□□□□ 0.54
TOP2B-204ENST00000435706 RBMY1A1P0DJD3 496 aaKnown RBP18.45■□□□□ 0.54
TOP2B-204ENST00000435706 RBMY1CP0DJD4 496 aa18.45■□□□□ 0.54
TOP2B-204ENST00000435706 GLMPQ8WWB7 406 aa18.45■□□□□ 0.54
TOP2B-204ENST00000435706 TMEM155Q4W5P6 130 aa18.45■□□□□ 0.54
TOP2B-204ENST00000435706 Q6P435 159 aa18.45■□□□□ 0.54
TOP2B-204ENST00000435706 C18orf32Q8TCD1 76 aa18.45■□□□□ 0.54
TOP2B-204ENST00000435706 RTTNQ86VV8 2226 aa18.45■□□□□ 0.54
TOP2B-204ENST00000435706 ASCL4Q6XD76 172 aa18.45■□□□□ 0.54
TOP2B-204ENST00000435706 PIMREGQ9BSJ6 248 aa18.45■□□□□ 0.54
TOP2B-204ENST00000435706 IGKV3D-20A0A0C4DH25 116 aa18.44■□□□□ 0.54
TOP2B-204ENST00000435706 FAM231BA6NCW3 169 aa18.44■□□□□ 0.54
TOP2B-204ENST00000435706 SRRM5B3KS81 715 aa18.44■□□□□ 0.54
TOP2B-204ENST00000435706 CRIPAKQ8N1N5 446 aa18.44■□□□□ 0.54
TOP2B-204ENST00000435706 TRGV9Q99603 122 aa18.44■□□□□ 0.54
TOP2B-204ENST00000435706 CHAC1Q9BUX1 264 aa18.44■□□□□ 0.54
TOP2B-204ENST00000435706 ATXN8Q156A1 80 aa18.44■□□□□ 0.54
TOP2B-204ENST00000435706 MYOD1P15172 320 aa18.44■□□□□ 0.54
TOP2B-204ENST00000435706 RALGAPA1Q6GYQ0 2036 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms