RNA–Protein interactions for RNA: ENST00000435083.5

CHRNA1-207, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3

Gene CHRNA1, Length 1,596 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-207ENST00000435083 COMMD3Q9UBI1 195 aa8.23□□□□□ -1.09
CHRNA1-207ENST00000435083 TMED3Q9Y3Q3 217 aa8.23□□□□□ -1.09
CHRNA1-207ENST00000435083 SPCS3P61009 180 aa8.22□□□□□ -1.09
CHRNA1-207ENST00000435083 RNASE12Q5GAN4 147 aaKnown RBP8.22□□□□□ -1.09
CHRNA1-207ENST00000435083 NPIPB3Q92617 1050 aa8.22□□□□□ -1.09
CHRNA1-207ENST00000435083 ACY3Q96HD9 319 aa8.22□□□□□ -1.09
CHRNA1-207ENST00000435083 COPZ2Q9P299 210 aa8.22□□□□□ -1.09
CHRNA1-207ENST00000435083 LOC102723971A0A1B0GUV8 181 aa8.22□□□□□ -1.09
CHRNA1-207ENST00000435083 CDK2AP2O75956 126 aa8.22□□□□□ -1.09
CHRNA1-207ENST00000435083 HBE1P02100 147 aa8.22□□□□□ -1.09
CHRNA1-207ENST00000435083 RD3LP0DJH9 198 aa8.22□□□□□ -1.09
CHRNA1-207ENST00000435083 RORCP51449 518 aa8.22□□□□□ -1.09
CHRNA1-207ENST00000435083 DAD1P61803 113 aa8.22□□□□□ -1.09
CHRNA1-207ENST00000435083 OXA1LQ15070 435 aa8.22□□□□□ -1.09
CHRNA1-207ENST00000435083 C2orf83Q53S99 150 aa8.22□□□□□ -1.09
CHRNA1-207ENST00000435083 RNASE10Q5GAN6 216 aaKnown RBP8.22□□□□□ -1.09
CHRNA1-207ENST00000435083 OR51G1Q8NGK1 321 aa8.22□□□□□ -1.09
CHRNA1-207ENST00000435083 RNASEH2CQ8TDP1 164 aaKnown RBP8.22□□□□□ -1.09
CHRNA1-207ENST00000435083 C7orf50Q9BRJ6 194 aaKnown RBP8.22□□□□□ -1.09
CHRNA1-207ENST00000435083 ATG101Q9BSB4 218 aa8.22□□□□□ -1.09
CHRNA1-207ENST00000435083 SLC35B3Q9H1N7 401 aa8.22□□□□□ -1.09
CHRNA1-207ENST00000435083 SAV1Q9H4B6 383 aaPredicted RBP8.22□□□□□ -1.09
CHRNA1-207ENST00000435083 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.22□□□□□ -1.09
CHRNA1-207ENST00000435083 GOLT1BQ9Y3E0 138 aa8.22□□□□□ -1.09
CHRNA1-207ENST00000435083 YTHDF2Q9Y5A9 579 aaKnown RBP8.22□□□□□ -1.09
CHRNA1-207ENST00000435083 CEBPZOSA8MTT3 80 aa8.21□□□□□ -1.1
CHRNA1-207ENST00000435083 TOMM40O96008 361 aa8.21□□□□□ -1.1
CHRNA1-207ENST00000435083 APOA1P02647 267 aa8.21□□□□□ -1.1
CHRNA1-207ENST00000435083 UCP1P25874 307 aa8.21□□□□□ -1.1
CHRNA1-207ENST00000435083 ID1P41134 155 aa8.21□□□□□ -1.1
CHRNA1-207ENST00000435083 ETFRF1Q6IPR1 90 aa8.21□□□□□ -1.1
CHRNA1-207ENST00000435083 FOXI2Q6ZQN5 318 aa8.21□□□□□ -1.1
CHRNA1-207ENST00000435083 LHFPL1Q86WI0 220 aa8.21□□□□□ -1.1
CHRNA1-207ENST00000435083 CCDC71LQ8N9Z2 235 aa8.21□□□□□ -1.1
CHRNA1-207ENST00000435083 SLC24A4Q8NFF2 622 aa8.21□□□□□ -1.1
CHRNA1-207ENST00000435083 COQ8AQ8NI60 647 aa8.21□□□□□ -1.1
CHRNA1-207ENST00000435083 ZFAND1Q8TCF1 268 aa8.21□□□□□ -1.1
CHRNA1-207ENST00000435083 AP3S1Q92572 193 aa8.21□□□□□ -1.1
CHRNA1-207ENST00000435083 PBDC1Q9BVG4 233 aa8.21□□□□□ -1.1
CHRNA1-207ENST00000435083 NXPH3O95157 252 aa8.2□□□□□ -1.1
CHRNA1-207ENST00000435083 CD3DP04234 171 aa8.2□□□□□ -1.1
CHRNA1-207ENST00000435083 PSG1P11464 419 aa8.2□□□□□ -1.1
CHRNA1-207ENST00000435083 RRN3P1Q2M238 152 aa8.2□□□□□ -1.1
CHRNA1-207ENST00000435083 GSG1LQ6UXU4 331 aa8.2□□□□□ -1.1
CHRNA1-207ENST00000435083 C1orf158Q8N1D5 194 aa8.2□□□□□ -1.1
CHRNA1-207ENST00000435083 ZNF709Q8N972 641 aa8.2□□□□□ -1.1
CHRNA1-207ENST00000435083 C15orf53Q8NAA6 179 aa8.2□□□□□ -1.1
CHRNA1-207ENST00000435083 OR52E5Q8NH55 327 aa8.2□□□□□ -1.1
CHRNA1-207ENST00000435083 S100ZQ8WXG8 99 aa8.2□□□□□ -1.1
CHRNA1-207ENST00000435083 WDR12Q9GZL7 423 aaKnown RBP8.2□□□□□ -1.1
CHRNA1-207ENST00000435083 KLK11Q9UBX7 282 aa8.2□□□□□ -1.1
CHRNA1-207ENST00000435083 ELK1P19419 428 aa8.19□□□□□ -1.1
CHRNA1-207ENST00000435083 S100A5P33763 92 aa8.19□□□□□ -1.1
CHRNA1-207ENST00000435083 FAM3BP58499 235 aaPredicted RBP8.19□□□□□ -1.1
CHRNA1-207ENST00000435083 PSG9Q00887 426 aa8.19□□□□□ -1.1
CHRNA1-207ENST00000435083 FAM219AQ8IW50 185 aa8.19□□□□□ -1.1
CHRNA1-207ENST00000435083 ARRDC1Q8N5I2 433 aa8.19□□□□□ -1.1
CHRNA1-207ENST00000435083 OR13C8Q8NGS7 320 aa8.19□□□□□ -1.1
CHRNA1-207ENST00000435083 MCFD2Q8NI22 146 aa8.19□□□□□ -1.1
CHRNA1-207ENST00000435083 TMEM170AQ8WVE7 144 aa8.19□□□□□ -1.1
CHRNA1-207ENST00000435083 RNF125Q96EQ8 232 aa8.19□□□□□ -1.1
CHRNA1-207ENST00000435083 CLUHP3Q96NS8 147 aa8.19□□□□□ -1.1
CHRNA1-207ENST00000435083 SLIRPQ9GZT3 109 aaKnown RBP8.19□□□□□ -1.1
CHRNA1-207ENST00000435083 MAGT1Q9H0U3 335 aa8.19□□□□□ -1.1
CHRNA1-207ENST00000435083 CACNG5Q9UF02 275 aa8.19□□□□□ -1.1
CHRNA1-207ENST00000435083 PFDN2Q9UHV9 154 aa8.19□□□□□ -1.1
CHRNA1-207ENST00000435083 F6UB75 175 aa8.18□□□□□ -1.1
CHRNA1-207ENST00000435083 HPGDSO60760 199 aa8.18□□□□□ -1.1
CHRNA1-207ENST00000435083 NUP62P37198 522 aaPredicted RBP8.18□□□□□ -1.1
CHRNA1-207ENST00000435083 PSMB3P49720 205 aa8.18□□□□□ -1.1
CHRNA1-207ENST00000435083 ZNF79Q15937 498 aa8.18□□□□□ -1.1
CHRNA1-207ENST00000435083 SCGB2B2Q4G0G5 96 aa8.18□□□□□ -1.1
CHRNA1-207ENST00000435083 AARDQ4LEZ3 155 aa8.18□□□□□ -1.1
CHRNA1-207ENST00000435083 FAM78BQ5VT40 261 aa8.18□□□□□ -1.1
CHRNA1-207ENST00000435083 EBLN2Q6P2I7 272 aa8.18□□□□□ -1.1
CHRNA1-207ENST00000435083 NOXA1Q86UR1 476 aa8.18□□□□□ -1.1
CHRNA1-207ENST00000435083 C6orf223Q8N319 242 aa8.18□□□□□ -1.1
CHRNA1-207ENST00000435083 TERB2Q8NHR7 220 aa8.18□□□□□ -1.1
CHRNA1-207ENST00000435083 MARCH1Q8TCQ1 289 aa8.18□□□□□ -1.1
CHRNA1-207ENST00000435083 GPR146Q96CH1 333 aa8.18□□□□□ -1.1
CHRNA1-207ENST00000435083 TMEM222Q9H0R3 208 aa8.18□□□□□ -1.1
CHRNA1-207ENST00000435083 NBDYA0A0U1RRE5 68 aa8.18□□□□□ -1.1
CHRNA1-207ENST00000435083 FAM25AB3EWG3 89 aa8.18□□□□□ -1.1
CHRNA1-207ENST00000435083 FAM25CB3EWG5 89 aa8.18□□□□□ -1.1
CHRNA1-207ENST00000435083 FAM25GB3EWG6 89 aa8.18□□□□□ -1.1
CHRNA1-207ENST00000435083 B3GALNT1O75752 331 aa8.18□□□□□ -1.1
CHRNA1-207ENST00000435083 CDS2O95674 445 aa8.18□□□□□ -1.1
CHRNA1-207ENST00000435083 OR5AC1P0C628 307 aa8.18□□□□□ -1.1
CHRNA1-207ENST00000435083 MEF2DQ14814 521 aa8.18□□□□□ -1.1
CHRNA1-207ENST00000435083 SPATA31B1PQ5VZV4 182 aa8.18□□□□□ -1.1
CHRNA1-207ENST00000435083 MZT2AQ6P582 158 aa8.18□□□□□ -1.1
CHRNA1-207ENST00000435083 OR52I2Q8NH67 350 aa8.18□□□□□ -1.1
CHRNA1-207ENST00000435083 LHFPL5Q8TAF8 219 aa8.18□□□□□ -1.1
CHRNA1-207ENST00000435083 RBPMSQ93062 196 aaKnown RBP8.18□□□□□ -1.1
CHRNA1-207ENST00000435083 TMEM208Q9BTX3 173 aa8.18□□□□□ -1.1
CHRNA1-207ENST00000435083 TEX13DA0A0J9YY54 714 aaPredicted RBP8.17□□□□□ -1.1
CHRNA1-207ENST00000435083 KLF9Q13886 244 aaPredicted RBP8.17□□□□□ -1.1
CHRNA1-207ENST00000435083 OR8G2PQ6IF36 304 aa8.17□□□□□ -1.1
CHRNA1-207ENST00000435083 SELENOHQ8IZQ5 122 aaKnown RBP8.17□□□□□ -1.1
CHRNA1-207ENST00000435083 Q8N1X5 172 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms