RNA–Protein interactions for RNA: ENST00000434601.7

LINC00539-203, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 960 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-203ENST00000434601 TIGITQ495A1 244 aa8.76□□□□□ -1.01
LINC00539-203ENST00000434601 GCSAMLQ5JQS6 135 aa8.76□□□□□ -1.01
LINC00539-203ENST00000434601 COMMD7Q86VX2 200 aa8.76□□□□□ -1.01
LINC00539-203ENST00000434601 RPP25LQ8N5L8 163 aaKnown RBP8.76□□□□□ -1.01
LINC00539-203ENST00000434601 ZNF502Q8TBZ5 544 aa8.76□□□□□ -1.01
LINC00539-203ENST00000434601 WFDC12Q8WWY7 111 aa8.76□□□□□ -1.01
LINC00539-203ENST00000434601 TXN2Q99757 166 aa8.76□□□□□ -1.01
LINC00539-203ENST00000434601 ACTR3CQ9C0K3 210 aaPredicted RBP8.76□□□□□ -1.01
LINC00539-203ENST00000434601 HRH4Q9H3N8 390 aa8.76□□□□□ -1.01
LINC00539-203ENST00000434601 SEC14L6B5MCN3 397 aa8.75□□□□□ -1.01
LINC00539-203ENST00000434601 IGKV1-17P01599 117 aa8.75□□□□□ -1.01
LINC00539-203ENST00000434601 IGHG4P01861 327 aa8.75□□□□□ -1.01
LINC00539-203ENST00000434601 HBE1P02100 147 aa8.75□□□□□ -1.01
LINC00539-203ENST00000434601 PF4V1P10720 104 aa8.75□□□□□ -1.01
LINC00539-203ENST00000434601 CDC34P49427 236 aaPredicted RBP8.75□□□□□ -1.01
LINC00539-203ENST00000434601 SLC35B1P78383 322 aa8.75□□□□□ -1.01
LINC00539-203ENST00000434601 ATP5G2Q06055 141 aa8.75□□□□□ -1.01
LINC00539-203ENST00000434601 ZNF726P1Q15940 193 aa8.75□□□□□ -1.01
LINC00539-203ENST00000434601 SSX7Q7RTT5 188 aa8.75□□□□□ -1.01
LINC00539-203ENST00000434601 SLC7A5P1Q8MH63 180 aa8.75□□□□□ -1.01
LINC00539-203ENST00000434601 LYPD6BQ8NI32 183 aa8.75□□□□□ -1.01
LINC00539-203ENST00000434601 USMG5Q96IX5 58 aa8.75□□□□□ -1.01
LINC00539-203ENST00000434601 GAR1Q9NY12 217 aaKnown RBP8.75□□□□□ -1.01
LINC00539-203ENST00000434601 TRBV7-1A0A0A6YYK4 115 aa8.74□□□□□ -1.01
LINC00539-203ENST00000434601 PSMB11A5LHX3 300 aa8.74□□□□□ -1.01
LINC00539-203ENST00000434601 MAP1LC3B2A6NCE7 125 aa8.74□□□□□ -1.01
LINC00539-203ENST00000434601 OR2T8A6NH00 312 aa8.74□□□□□ -1.01
LINC00539-203ENST00000434601 TEX46H3BTG2 121 aa8.74□□□□□ -1.01
LINC00539-203ENST00000434601 TOMM40O96008 361 aa8.74□□□□□ -1.01
LINC00539-203ENST00000434601 GPR183P32249 361 aa8.74□□□□□ -1.01
LINC00539-203ENST00000434601 RHOBP62745 196 aa8.74□□□□□ -1.01
LINC00539-203ENST00000434601 SPSB3Q6PJ21 355 aa8.74□□□□□ -1.01
LINC00539-203ENST00000434601 IL34Q6ZMJ4 242 aa8.74□□□□□ -1.01
LINC00539-203ENST00000434601 Q6ZSV7 163 aa8.74□□□□□ -1.01
LINC00539-203ENST00000434601 OR1L4Q8NGR5 311 aa8.74□□□□□ -1.01
LINC00539-203ENST00000434601 SFT2D1Q8WV19 159 aa8.74□□□□□ -1.01
LINC00539-203ENST00000434601 MBD3L1Q8WWY6 194 aa8.74□□□□□ -1.01
LINC00539-203ENST00000434601 CCDC140Q96MF4 163 aa8.74□□□□□ -1.01
LINC00539-203ENST00000434601 ATP6V0BQ99437 205 aa8.74□□□□□ -1.01
LINC00539-203ENST00000434601 PFDN5Q99471 154 aa8.74□□□□□ -1.01
LINC00539-203ENST00000434601 CITED1Q99966 193 aa8.74□□□□□ -1.01
LINC00539-203ENST00000434601 MAP1LC3BQ9GZQ8 125 aa8.74□□□□□ -1.01
LINC00539-203ENST00000434601 SERTAD4Q9NUC0 356 aa8.74□□□□□ -1.01
LINC00539-203ENST00000434601 TRAV1-1A0A0B4J248 108 aa8.73□□□□□ -1.01
LINC00539-203ENST00000434601 A0A1B0GV50 99 aa8.73□□□□□ -1.01
LINC00539-203ENST00000434601 A0A1W2PPV4 95 aa8.73□□□□□ -1.01
LINC00539-203ENST00000434601 NUDT19A8MXV4 375 aa8.73□□□□□ -1.01
LINC00539-203ENST00000434601 NUPL2O15504 423 aaKnown RBP8.73□□□□□ -1.01
LINC00539-203ENST00000434601 COX7A2P2O60397 106 aa8.73□□□□□ -1.01
LINC00539-203ENST00000434601 OR5G3P0C626 314 aa8.73□□□□□ -1.01
LINC00539-203ENST00000434601 RD3LP0DJH9 198 aa8.73□□□□□ -1.01
LINC00539-203ENST00000434601 PSG1P11464 419 aa8.73□□□□□ -1.01
LINC00539-203ENST00000434601 PSMB8P28062 276 aa8.73□□□□□ -1.01
LINC00539-203ENST00000434601 PLP1P60201 277 aa8.73□□□□□ -1.01
LINC00539-203ENST00000434601 YPEL3P61236 119 aaPredicted RBP8.73□□□□□ -1.01
LINC00539-203ENST00000434601 LCN15Q6UWW0 184 aa8.73□□□□□ -1.01
LINC00539-203ENST00000434601 ZNF329Q86UD4 541 aa8.73□□□□□ -1.01
LINC00539-203ENST00000434601 COMMD1Q8N668 190 aa8.73□□□□□ -1.01
LINC00539-203ENST00000434601 GATAD1Q8WUU5 269 aa8.73□□□□□ -1.01
LINC00539-203ENST00000434601 RAB24Q969Q5 203 aa8.73□□□□□ -1.01
LINC00539-203ENST00000434601 RNF2Q99496 336 aa8.73□□□□□ -1.01
LINC00539-203ENST00000434601 MRPL32Q9BYC8 188 aaKnown RBP8.73□□□□□ -1.01
LINC00539-203ENST00000434601 KLK15Q9H2R5 256 aa8.73□□□□□ -1.01
LINC00539-203ENST00000434601 DOK5Q9P104 306 aa8.73□□□□□ -1.01
LINC00539-203ENST00000434601 RNF114Q9Y508 228 aa8.73□□□□□ -1.01
LINC00539-203ENST00000434601 A0A0G2JLM5 398 aa8.72□□□□□ -1.01
LINC00539-203ENST00000434601 HMGB3O15347 200 aaKnown RBP8.72□□□□□ -1.01
LINC00539-203ENST00000434601 TGOLN2O43493 480 aa8.72□□□□□ -1.01
LINC00539-203ENST00000434601 ATP6V1G1O75348 118 aa8.72□□□□□ -1.01
LINC00539-203ENST00000434601 EIF3GO75821 320 aaKnown RBP eCLIP8.72□□□□□ -1.01
LINC00539-203ENST00000434601 ELANEP08246 267 aa8.72□□□□□ -1.01
LINC00539-203ENST00000434601 RAB9AP51151 201 aa8.72□□□□□ -1.01
LINC00539-203ENST00000434601 LYZP61626 148 aa8.72□□□□□ -1.01
LINC00539-203ENST00000434601 FOXE3Q13461 319 aa8.72□□□□□ -1.01
LINC00539-203ENST00000434601 FAM78BQ5VT40 261 aa8.72□□□□□ -1.01
LINC00539-203ENST00000434601 C10orf113Q5VZT2 155 aa8.72□□□□□ -1.01
LINC00539-203ENST00000434601 TEX38Q6PEX7 206 aa8.72□□□□□ -1.01
LINC00539-203ENST00000434601 CLEC19AQ6UXS0 136 aa8.72□□□□□ -1.01
LINC00539-203ENST00000434601 LCNL1Q6ZST4 164 aa8.72□□□□□ -1.01
LINC00539-203ENST00000434601 OR51G1Q8NGK1 321 aa8.72□□□□□ -1.01
LINC00539-203ENST00000434601 OR1B1Q8NGR6 318 aa8.72□□□□□ -1.01
LINC00539-203ENST00000434601 TMEM37Q8WXS4 190 aa8.72□□□□□ -1.01
LINC00539-203ENST00000434601 MARC2Q969Z3 335 aa8.72□□□□□ -1.01
LINC00539-203ENST00000434601 SEPSECSQ9HD40 501 aaKnown RBP8.72□□□□□ -1.01
LINC00539-203ENST00000434601 FUT9Q9Y231 359 aa8.72□□□□□ -1.01
LINC00539-203ENST00000434601 ELOA3CA0A087WX78 387 aaPredicted RBP8.71□□□□□ -1.02
LINC00539-203ENST00000434601 RAB19A4D1S5 217 aa8.71□□□□□ -1.02
LINC00539-203ENST00000434601 HYPMO75409 117 aa8.71□□□□□ -1.02
LINC00539-203ENST00000434601 OR2C1O95371 312 aa8.71□□□□□ -1.02
LINC00539-203ENST00000434601 CTSGP08311 255 aa8.71□□□□□ -1.02
LINC00539-203ENST00000434601 STAG3L2P0CL84 134 aa8.71□□□□□ -1.02
LINC00539-203ENST00000434601 STAG3L3P0CL85 134 aa8.71□□□□□ -1.02
LINC00539-203ENST00000434601 ORM2P19652 201 aa8.71□□□□□ -1.02
LINC00539-203ENST00000434601 ADMP35318 185 aa8.71□□□□□ -1.02
LINC00539-203ENST00000434601 FGF8P55075 233 aaPredicted RBP8.71□□□□□ -1.02
LINC00539-203ENST00000434601 SPATA31B1PQ5VZV4 182 aa8.71□□□□□ -1.02
LINC00539-203ENST00000434601 C10orf99Q6UWK7 81 aa8.71□□□□□ -1.02
LINC00539-203ENST00000434601 ZNF600Q6ZNG1 722 aa8.71□□□□□ -1.02
LINC00539-203ENST00000434601 MIR17HGQ75NE6 70 aa8.71□□□□□ -1.02
LINC00539-203ENST00000434601 RNF152Q8N8N0 203 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms