RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 CHEK1O14757 476 aa11.71□□□□□ -0.53
TREX1-201ENST00000433541 DEDDO75618 318 aa11.71□□□□□ -0.53
TREX1-201ENST00000433541 ZNF90Q03938 601 aa11.71□□□□□ -0.53
TREX1-201ENST00000433541 SLC38A11Q08AI6 406 aa11.71□□□□□ -0.53
TREX1-201ENST00000433541 PPP1R1CQ8WVI7 109 aa11.71□□□□□ -0.53
TREX1-201ENST00000433541 TRGV9Q99603 122 aa11.71□□□□□ -0.53
TREX1-201ENST00000433541 LYRM2Q9NU23 88 aaPredicted RBP11.71□□□□□ -0.53
TREX1-201ENST00000433541 RABAC1Q9UI14 185 aa11.71□□□□□ -0.53
TREX1-201ENST00000433541 TRAV25A0A0B4J276 109 aa11.7□□□□□ -0.54
TREX1-201ENST00000433541 HNRNPCP07910 306 aaKnown RBP eCLIP11.7□□□□□ -0.54
TREX1-201ENST00000433541 TFPI2P48307 235 aa11.7□□□□□ -0.54
TREX1-201ENST00000433541 HBG1P69891 147 aa11.7□□□□□ -0.54
TREX1-201ENST00000433541 HBG2P69892 147 aa11.7□□□□□ -0.54
TREX1-201ENST00000433541 ST8SIA2Q92186 375 aa11.7□□□□□ -0.54
TREX1-201ENST00000433541 RNF125Q96EQ8 232 aa11.7□□□□□ -0.54
TREX1-201ENST00000433541 RNF2Q99496 336 aa11.7□□□□□ -0.54
TREX1-201ENST00000433541 PFDN2Q9UHV9 154 aa11.7□□□□□ -0.54
TREX1-201ENST00000433541 IGKV1D-37A0A075B6S9 117 aa11.69□□□□□ -0.54
TREX1-201ENST00000433541 E5RGE8 158 aa11.69□□□□□ -0.54
TREX1-201ENST00000433541 APOHP02749 345 aaPredicted RBP11.69□□□□□ -0.54
TREX1-201ENST00000433541 SULT1A1P50225 295 aa11.69□□□□□ -0.54
TREX1-201ENST00000433541 PAFAH1B2P68402 229 aa11.69□□□□□ -0.54
TREX1-201ENST00000433541 IL15RAQ13261 267 aa11.69□□□□□ -0.54
TREX1-201ENST00000433541 TCF24Q7RTU0 167 aa11.69□□□□□ -0.54
TREX1-201ENST00000433541 TMEM144Q7Z5S9 345 aa11.69□□□□□ -0.54
TREX1-201ENST00000433541 GBGT1Q8N5D6 347 aa11.69□□□□□ -0.54
TREX1-201ENST00000433541 THAP8Q8NA92 274 aa11.69□□□□□ -0.54
TREX1-201ENST00000433541 BPIFCQ8NFQ6 507 aa11.69□□□□□ -0.54
TREX1-201ENST00000433541 ZNF414Q96IQ9 312 aa11.69□□□□□ -0.54
TREX1-201ENST00000433541 NEURL2Q9BR09 285 aa11.69□□□□□ -0.54
TREX1-201ENST00000433541 SLC25A31Q9H0C2 315 aa11.69□□□□□ -0.54
TREX1-201ENST00000433541 TUBA4BQ9H853 241 aa11.69□□□□□ -0.54
TREX1-201ENST00000433541 NPVFQ9HCQ7 196 aa11.69□□□□□ -0.54
TREX1-201ENST00000433541 OR5AC2Q9NZP5 309 aa11.69□□□□□ -0.54
TREX1-201ENST00000433541 IGKV1OR2-108A0A075B7D4 117 aa11.68□□□□□ -0.54
TREX1-201ENST00000433541 IGSF23A1L1A6 192 aa11.68□□□□□ -0.54
TREX1-201ENST00000433541 OR4C46A6NHA9 309 aa11.68□□□□□ -0.54
TREX1-201ENST00000433541 ZNF785A8K8V0 405 aa11.68□□□□□ -0.54
TREX1-201ENST00000433541 PMS2P5A8MQ11 134 aa11.68□□□□□ -0.54
TREX1-201ENST00000433541 DNASE2O00115 360 aaPredicted RBP11.68□□□□□ -0.54
TREX1-201ENST00000433541 P2RY1P47900 373 aa11.68□□□□□ -0.54
TREX1-201ENST00000433541 EIF2B2P49770 351 aaKnown RBP11.68□□□□□ -0.54
TREX1-201ENST00000433541 FCN2Q15485 313 aa11.68□□□□□ -0.54
TREX1-201ENST00000433541 USF2Q15853 346 aaPredicted RBP11.68□□□□□ -0.54
TREX1-201ENST00000433541 TEPPQ6URK8 271 aa11.68□□□□□ -0.54
TREX1-201ENST00000433541 TMEM252Q8N6L7 170 aa11.68□□□□□ -0.54
TREX1-201ENST00000433541 SPAG8Q99932 426 aaPredicted RBP11.68□□□□□ -0.54
TREX1-201ENST00000433541 UBE2L5PA0A1B0GUS4 154 aa11.67□□□□□ -0.54
TREX1-201ENST00000433541 TSPAN4O14817 238 aa11.67□□□□□ -0.54
TREX1-201ENST00000433541 DFFBO76075 338 aa11.67□□□□□ -0.54
TREX1-201ENST00000433541 MPC2O95563 127 aa11.67□□□□□ -0.54
TREX1-201ENST00000433541 CFDP00746 253 aaPredicted RBP11.67□□□□□ -0.54
TREX1-201ENST00000433541 CD5P06127 495 aa11.67□□□□□ -0.54
TREX1-201ENST00000433541 CD7P09564 240 aa11.67□□□□□ -0.54
TREX1-201ENST00000433541 CXCL3P19876 107 aa11.67□□□□□ -0.54
TREX1-201ENST00000433541 CRYBB3P26998 211 aa11.67□□□□□ -0.54
TREX1-201ENST00000433541 S100A11P31949 105 aa11.67□□□□□ -0.54
TREX1-201ENST00000433541 NUP62P37198 522 aaPredicted RBP11.67□□□□□ -0.54
TREX1-201ENST00000433541 ARL16Q0P5N6 197 aa11.67□□□□□ -0.54
TREX1-201ENST00000433541 OXA1LQ15070 435 aa11.67□□□□□ -0.54
TREX1-201ENST00000433541 CYP2G1PQ6ZSU1 146 aa11.67□□□□□ -0.54
TREX1-201ENST00000433541 WFDC3Q8IUB2 231 aa11.67□□□□□ -0.54
TREX1-201ENST00000433541 STXBP6Q8NFX7 210 aa11.67□□□□□ -0.54
TREX1-201ENST00000433541 OR1B1Q8NGR6 318 aa11.67□□□□□ -0.54
TREX1-201ENST00000433541 THAP6Q8TBB0 222 aa11.67□□□□□ -0.54
TREX1-201ENST00000433541 GGACTQ9BVM4 153 aa11.67□□□□□ -0.54
TREX1-201ENST00000433541 UQCC1Q9NVA1 299 aa11.67□□□□□ -0.54
TREX1-201ENST00000433541 FNDC10F2Z333 226 aa11.66□□□□□ -0.54
TREX1-201ENST00000433541 ORM2P19652 201 aa11.66□□□□□ -0.54
TREX1-201ENST00000433541 GATA2P23769 480 aaPredicted RBP11.66□□□□□ -0.54
TREX1-201ENST00000433541 BAXQ07812 192 aa11.66□□□□□ -0.54
TREX1-201ENST00000433541 RAB31Q13636 194 aa11.66□□□□□ -0.54
TREX1-201ENST00000433541 TMEM147Q9BVK8 224 aa11.66□□□□□ -0.54
TREX1-201ENST00000433541 C11orf1Q9H5F2 150 aa11.66□□□□□ -0.54
TREX1-201ENST00000433541 VSIRQ9H7M9 311 aa11.66□□□□□ -0.54
TREX1-201ENST00000433541 DOK5Q9P104 306 aa11.66□□□□□ -0.54
TREX1-201ENST00000433541 LSM4Q9Y4Z0 139 aaKnown RBP11.66□□□□□ -0.54
TREX1-201ENST00000433541 DNAH3Q8TD57 4116 aa11.66□□□□□ -0.54
TREX1-201ENST00000433541 OR11H12B2RN74 326 aa11.65□□□□□ -0.54
TREX1-201ENST00000433541 OR5G3P0C626 314 aa11.65□□□□□ -0.54
TREX1-201ENST00000433541 LINC00869P0C866 280 aa11.65□□□□□ -0.54
TREX1-201ENST00000433541 IGHV4-30-4P0DP06 118 aa11.65□□□□□ -0.54
TREX1-201ENST00000433541 S100A7P31151 101 aa11.65□□□□□ -0.54
TREX1-201ENST00000433541 SELENOTP62341 195 aa11.65□□□□□ -0.54
TREX1-201ENST00000433541 EWSR1Q01844 656 aaKnown RBP eCLIP11.65□□□□□ -0.54
TREX1-201ENST00000433541 ZNF546Q86UE3 836 aa11.65□□□□□ -0.54
TREX1-201ENST00000433541 OR11H7Q8NGC8 314 aa11.65□□□□□ -0.54
TREX1-201ENST00000433541 MBD2Q9UBB5 411 aa11.65□□□□□ -0.54
TREX1-201ENST00000433541 UBQLN2Q9UHD9 624 aa11.65□□□□□ -0.54
TREX1-201ENST00000433541 HELTA6NFD8 242 aa11.64□□□□□ -0.55
TREX1-201ENST00000433541 H0YIZ8 118 aa11.64□□□□□ -0.55
TREX1-201ENST00000433541 RAP2BP61225 183 aa11.64□□□□□ -0.55
TREX1-201ENST00000433541 NHLH2Q02577 135 aa11.64□□□□□ -0.55
TREX1-201ENST00000433541 CLINT1Q14677 625 aa11.64□□□□□ -0.55
TREX1-201ENST00000433541 ATP6V1FQ16864 119 aa11.64□□□□□ -0.55
TREX1-201ENST00000433541 Q8N1Y9 231 aa11.64□□□□□ -0.55
TREX1-201ENST00000433541 DEFB125Q8N687 156 aa11.64□□□□□ -0.55
TREX1-201ENST00000433541 OR5C1Q8NGR4 320 aa11.64□□□□□ -0.55
TREX1-201ENST00000433541 WFDC10AQ9H1F0 79 aa11.64□□□□□ -0.55
TREX1-201ENST00000433541 SLC25A22Q9H936 323 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms