RNA–Protein interactions for RNA: ENST00000433274.6

SF1-209, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 2,317 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-209ENST00000433274 GATA3P23771 443 aa11.92□□□□□ -0.5
SF1-209ENST00000433274 FAM24BQ8N5W8 94 aa11.92□□□□□ -0.5
SF1-209ENST00000433274 BEX4Q9NWD9 120 aaPredicted RBP11.92□□□□□ -0.5
SF1-209ENST00000433274 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.91□□□□□ -0.52e-8■■■■□ 24.4
SF1-209ENST00000433274 RD3LP0DJH9 198 aa11.91□□□□□ -0.5
SF1-209ENST00000433274 RPL23P62829 140 aaKnown RBP11.91□□□□□ -0.5
SF1-209ENST00000433274 PAXXQ9BUH6 204 aa11.91□□□□□ -0.5
SF1-209ENST00000433274 MOB4Q9Y3A3 225 aa11.91□□□□□ -0.5
SF1-209ENST00000433274 ZFHX3Q15911 3703 aa11.91□□□□□ -0.5
SF1-209ENST00000433274 J3QKU1 62 aa11.91□□□□□ -0.5
SF1-209ENST00000433274 NDUFB8O95169 186 aa11.91□□□□□ -0.5
SF1-209ENST00000433274 TGFAP01135 160 aa11.91□□□□□ -0.5
SF1-209ENST00000433274 IGHV3-23P01764 117 aa11.91□□□□□ -0.5
SF1-209ENST00000433274 LY6EQ16553 131 aa11.91□□□□□ -0.5
SF1-209ENST00000433274 HIST1H2BAQ96A08 127 aa11.91□□□□□ -0.5
SF1-209ENST00000433274 OR51M1Q9H341 326 aa11.91□□□□□ -0.5
SF1-209ENST00000433274 THYN1Q9P016 225 aa11.91□□□□□ -0.5
SF1-209ENST00000433274 GNG7O60262 68 aa11.9□□□□□ -0.5
SF1-209ENST00000433274 SNRPCP09234 159 aaKnown RBP11.9□□□□□ -0.5
SF1-209ENST00000433274 PLP1P60201 277 aa11.9□□□□□ -0.5
SF1-209ENST00000433274 Q5PR19 223 aa11.9□□□□□ -0.5
SF1-209ENST00000433274 HIST2H2BCQ6DN03 193 aa11.9□□□□□ -0.5
SF1-209ENST00000433274 C16orf82Q7Z2V1 217 aa11.9□□□□□ -0.5
SF1-209ENST00000433274 URGCP-MRPS24S4R325 110 aa11.9□□□□□ -0.5
SF1-209ENST00000433274 ARL2-SNX15V9GYD0 113 aa11.9□□□□□ -0.5
SF1-209ENST00000433274 DOPEY2Q9Y3R5 2298 aa11.9□□□□□ -0.5
SF1-209ENST00000433274 G3V318 75 aa11.89□□□□□ -0.51
SF1-209ENST00000433274 H3BUX3 64 aa11.89□□□□□ -0.51
SF1-209ENST00000433274 MFAP4P55083 255 aa11.89□□□□□ -0.51
SF1-209ENST00000433274 RNF212Q495C1 297 aa11.89□□□□□ -0.51
SF1-209ENST00000433274 Q56UQ5 140 aa11.89□□□□□ -0.51
SF1-209ENST00000433274 LEMD1Q68G75 181 aa11.89□□□□□ -0.51
SF1-209ENST00000433274 FAM110DQ8TAY7 271 aaPredicted RBP11.89□□□□□ -0.51
SF1-209ENST00000433274 AURKAIP1Q9NWT8 199 aaPredicted RBP11.89□□□□□ -0.51
SF1-209ENST00000433274 HIGD1AQ9Y241 93 aa11.89□□□□□ -0.51
SF1-209ENST00000433274 GGTLC3B5MD39 225 aa11.89□□□□□ -0.51
SF1-209ENST00000433274 FABP1P07148 127 aa11.89□□□□□ -0.51
SF1-209ENST00000433274 LOXL1Q08397 574 aaPredicted RBP11.89□□□□□ -0.51
SF1-209ENST00000433274 ZNF343Q6P1L6 599 aa11.89□□□□□ -0.51
SF1-209ENST00000433274 C21orf62Q9NYP8 219 aa11.89□□□□□ -0.51
SF1-209ENST00000433274 FBXL7Q9UJT9 491 aa11.89□□□□□ -0.51
SF1-209ENST00000433274 PGPEP1LA6NFU8 196 aa11.88□□□□□ -0.51
SF1-209ENST00000433274 AMY1AP04745 511 aa11.88□□□□□ -0.51
SF1-209ENST00000433274 CRYBA1P05813 215 aa11.88□□□□□ -0.51
SF1-209ENST00000433274 SUMO1P63165 101 aaKnown RBP11.88□□□□□ -0.51
SF1-209ENST00000433274 A0A1W2PRE2 83 aa11.88□□□□□ -0.51
SF1-209ENST00000433274 F8W735 103 aaPredicted RBP11.88□□□□□ -0.51
SF1-209ENST00000433274 MT-ND4LP03901 98 aa11.88□□□□□ -0.51
SF1-209ENST00000433274 LRRC75A-AS1Q8N1F1 130 aa11.88□□□□□ -0.51
SF1-209ENST00000433274 FXYD5Q96DB9 178 aa11.88□□□□□ -0.51
SF1-209ENST00000433274 TRBV20OR9-2A0A075B6H5 130 aa11.87□□□□□ -0.51
SF1-209ENST00000433274 CRYBB3P26998 211 aa11.87□□□□□ -0.51
SF1-209ENST00000433274 C9orf152Q5JTZ5 239 aa11.87□□□□□ -0.51
SF1-209ENST00000433274 C11orf52Q96A22 123 aa11.87□□□□□ -0.51
SF1-209ENST00000433274 APCP25054 2843 aa11.87□□□□□ -0.51
SF1-209ENST00000433274 TRAV30A0A087WSZ9 112 aa11.87□□□□□ -0.51
SF1-209ENST00000433274 MDFIC2A0A1B0GVS7 189 aa11.87□□□□□ -0.51
SF1-209ENST00000433274 TOMM40O96008 361 aa11.87□□□□□ -0.51
SF1-209ENST00000433274 IL4P05112 153 aa11.87□□□□□ -0.51
SF1-209ENST00000433274 LINC01551Q86U37 167 aa11.87□□□□□ -0.51
SF1-209ENST00000433274 STXBP6Q8NFX7 210 aa11.87□□□□□ -0.51
SF1-209ENST00000433274 YPEL4Q96NS1 127 aa11.87□□□□□ -0.51
SF1-209ENST00000433274 SLC25A39Q9BZJ4 359 aaPredicted RBP11.87□□□□□ -0.51
SF1-209ENST00000433274 CSPG4Q6UVK1 2322 aa11.86□□□□□ -0.51
SF1-209ENST00000433274 CXorf65A6NEN9 183 aa11.86□□□□□ -0.51
SF1-209ENST00000433274 OR2T8A6NH00 312 aa11.86□□□□□ -0.51
SF1-209ENST00000433274 CLDN34H7C241 214 aa11.86□□□□□ -0.51
SF1-209ENST00000433274 IGHV4-31P0DP07 118 aa11.86□□□□□ -0.51
SF1-209ENST00000433274 HIST1H1BP16401 226 aaKnown RBP11.86□□□□□ -0.51
SF1-209ENST00000433274 BLNKQ8WV28 456 aa11.86□□□□□ -0.51
SF1-209ENST00000433274 Q96MF0 132 aa11.86□□□□□ -0.51
SF1-209ENST00000433274 ZNF48Q96MX3 618 aaPredicted RBP11.86□□□□□ -0.51
SF1-209ENST00000433274 MLXQ9UH92 298 aa11.86□□□□□ -0.51
SF1-209ENST00000433274 LINC00527Q9UJ94 153 aa11.86□□□□□ -0.51
SF1-209ENST00000433274 ZANQ9Y493 2812 aa11.86□□□□□ -0.51
SF1-209ENST00000433274 A6NDX4 124 aa11.86□□□□□ -0.51
SF1-209ENST00000433274 RAB5AP20339 215 aa11.86□□□□□ -0.51
SF1-209ENST00000433274 HNF1AP20823 631 aa11.86□□□□□ -0.51
SF1-209ENST00000433274 RPL35P42766 123 aaKnown RBP11.86□□□□□ -0.51
SF1-209ENST00000433274 RHOGP84095 191 aa11.86□□□□□ -0.51
SF1-209ENST00000433274 ELOBQ15370 118 aa11.86□□□□□ -0.51
SF1-209ENST00000433274 C15orf32Q32M92 178 aa11.86□□□□□ -0.51
SF1-209ENST00000433274 ZNF491Q8N8L2 437 aa11.86□□□□□ -0.51
SF1-209ENST00000433274 Q8WTZ3 238 aa11.86□□□□□ -0.51
SF1-209ENST00000433274 RNF125Q96EQ8 232 aa11.86□□□□□ -0.51
SF1-209ENST00000433274 ELOVL1Q9BW60 279 aa11.86□□□□□ -0.51
SF1-209ENST00000433274 TMEM242Q9NWH2 141 aa11.86□□□□□ -0.51
SF1-209ENST00000433274 MRPL27Q9P0M9 148 aaKnown RBP11.86□□□□□ -0.51
SF1-209ENST00000433274 J3QLI3 93 aa11.85□□□□□ -0.51
SF1-209ENST00000433274 YPEL3P61236 119 aaPredicted RBP11.85□□□□□ -0.51
SF1-209ENST00000433274 TMEM68Q96MH6 324 aa11.85□□□□□ -0.51
SF1-209ENST00000433274 CTDSP1Q9GZU7 261 aa11.85□□□□□ -0.51
SF1-209ENST00000433274 GP9P14770 177 aa11.85□□□□□ -0.51
SF1-209ENST00000433274 RANP62826 216 aaKnown RBP11.85□□□□□ -0.51
SF1-209ENST00000433274 BCL6BQ8N143 479 aaPredicted RBP11.85□□□□□ -0.51
SF1-209ENST00000433274 MS4A10Q96PG2 267 aa11.85□□□□□ -0.51
SF1-209ENST00000433274 H3BTX0 84 aa11.84□□□□□ -0.51
SF1-209ENST00000433274 VN1R17PQ8TDU5 208 aa11.84□□□□□ -0.51
SF1-209ENST00000433274 PSMG3-AS1Q96PY0 264 aa11.84□□□□□ -0.51
SF1-209ENST00000433274 TGIF2-C20orf24A0A0A6YYL0 155 aa11.83□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms