RNA–Protein interactions for RNA: ENST00000431547.1

RFTN1-202, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 5

Gene RFTN1, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-202ENST00000431547 THAP6Q8TBB0 222 aa13.93□□□□□ -0.18
RFTN1-202ENST00000431547 MBD2Q9UBB5 411 aa13.93□□□□□ -0.18
RFTN1-202ENST00000431547 WI2-2373I1.2A0A1W2PRP0 233 aa13.92□□□□□ -0.18
RFTN1-202ENST00000431547 CFDP00746 253 aaPredicted RBP13.92□□□□□ -0.18
RFTN1-202ENST00000431547 IL4P05112 153 aa13.92□□□□□ -0.18
RFTN1-202ENST00000431547 CRYBB3P26998 211 aa13.92□□□□□ -0.18
RFTN1-202ENST00000431547 NHLH2Q02577 135 aa13.92□□□□□ -0.18
RFTN1-202ENST00000431547 BAXQ07812 192 aa13.92□□□□□ -0.18
RFTN1-202ENST00000431547 VWC2Q2TAL6 325 aa13.92□□□□□ -0.18
RFTN1-202ENST00000431547 LCN12Q6JVE5 192 aa13.92□□□□□ -0.18
RFTN1-202ENST00000431547 TEPPQ6URK8 271 aa13.92□□□□□ -0.18
RFTN1-202ENST00000431547 BTNL8Q6UX41 500 aa13.92□□□□□ -0.18
RFTN1-202ENST00000431547 Q6ZNX1 250 aa13.92□□□□□ -0.18
RFTN1-202ENST00000431547 METTL26Q96S19 204 aa13.92□□□□□ -0.18
RFTN1-202ENST00000431547 RHPN1-AS1Q9BWJ2 59 aa13.92□□□□□ -0.18
RFTN1-202ENST00000431547 ZNF256Q9Y2P7 627 aaPredicted RBP13.92□□□□□ -0.18
RFTN1-202ENST00000431547 LSM4Q9Y4Z0 139 aaKnown RBP13.92□□□□□ -0.18
RFTN1-202ENST00000431547 CHEK1O14757 476 aa13.91□□□□□ -0.18
RFTN1-202ENST00000431547 LILRB2Q8N423 598 aa13.91□□□□□ -0.18
RFTN1-202ENST00000431547 RNF125Q96EQ8 232 aa13.91□□□□□ -0.18
RFTN1-202ENST00000431547 TMEM147Q9BVK8 224 aa13.91□□□□□ -0.18
RFTN1-202ENST00000431547 VSIRQ9H7M9 311 aa13.91□□□□□ -0.18
RFTN1-202ENST00000431547 UQCC1Q9NVA1 299 aa13.91□□□□□ -0.18
RFTN1-202ENST00000431547 TRAV25A0A0B4J276 109 aa13.9□□□□□ -0.18
RFTN1-202ENST00000431547 IZUMO1RA6ND01 250 aa13.9□□□□□ -0.18
RFTN1-202ENST00000431547 RPL12P30050 165 aaKnown RBP13.9□□□□□ -0.18
RFTN1-202ENST00000431547 BMI1P35226 326 aa13.9□□□□□ -0.18
RFTN1-202ENST00000431547 SELENOTP62341 195 aa13.9□□□□□ -0.18
RFTN1-202ENST00000431547 DEFA6Q01524 100 aa13.9□□□□□ -0.18
RFTN1-202ENST00000431547 OR2F1Q13607 317 aa13.9□□□□□ -0.18
RFTN1-202ENST00000431547 USF2Q15853 346 aaPredicted RBP13.9□□□□□ -0.18
RFTN1-202ENST00000431547 CYP2G1PQ6ZSU1 146 aa13.9□□□□□ -0.18
RFTN1-202ENST00000431547 AURKAIP1Q9NWT8 199 aaPredicted RBP13.9□□□□□ -0.18
RFTN1-202ENST00000431547 U3KQE9 123 aa13.9□□□□□ -0.18
RFTN1-202ENST00000431547 NOTCH1P46531 2555 aa13.89□□□□□ -0.19
RFTN1-202ENST00000431547 IGHV3-49A0A0A0MS15 119 aa13.89□□□□□ -0.19
RFTN1-202ENST00000431547 A0A1W2PS18 150 aa13.89□□□□□ -0.19
RFTN1-202ENST00000431547 ZNF785A8K8V0 405 aa13.89□□□□□ -0.19
RFTN1-202ENST00000431547 APOHP02749 345 aaPredicted RBP13.89□□□□□ -0.19
RFTN1-202ENST00000431547 PRB2P02812 416 aaPredicted RBP13.89□□□□□ -0.19
RFTN1-202ENST00000431547 GP9P14770 177 aa13.89□□□□□ -0.19
RFTN1-202ENST00000431547 Q5BKY6 102 aa13.89□□□□□ -0.19
RFTN1-202ENST00000431547 LAMTOR1Q6IAA8 161 aa13.89□□□□□ -0.19
RFTN1-202ENST00000431547 TMEM182Q6ZP80 229 aaPredicted RBP13.89□□□□□ -0.19
RFTN1-202ENST00000431547 BPIFCQ8NFQ6 507 aa13.89□□□□□ -0.19
RFTN1-202ENST00000431547 OR5C1Q8NGR4 320 aa13.89□□□□□ -0.19
RFTN1-202ENST00000431547 CHAC2Q8WUX2 184 aa13.89□□□□□ -0.19
RFTN1-202ENST00000431547 TMEM231Q9H6L2 316 aa13.89□□□□□ -0.19
RFTN1-202ENST00000431547 WDR83OSQ9Y284 106 aa13.89□□□□□ -0.19
RFTN1-202ENST00000431547 CD5P06127 495 aa13.88□□□□□ -0.19
RFTN1-202ENST00000431547 HNRNPCP07910 306 aaKnown RBP eCLIP13.88□□□□□ -0.19
RFTN1-202ENST00000431547 RBPMS2Q6ZRY4 209 aaKnown RBP13.88□□□□□ -0.19
RFTN1-202ENST00000431547 TMEM61Q8N0U2 210 aa13.88□□□□□ -0.19
RFTN1-202ENST00000431547 OR2T35Q8NGX2 323 aa13.88□□□□□ -0.19
RFTN1-202ENST00000431547 ST8SIA2Q92186 375 aa13.88□□□□□ -0.19
RFTN1-202ENST00000431547 NARS2Q96I59 477 aaKnown RBP13.88□□□□□ -0.19
RFTN1-202ENST00000431547 RNF2Q99496 336 aa13.88□□□□□ -0.19
RFTN1-202ENST00000431547 RABAC1Q9UI14 185 aa13.88□□□□□ -0.19
RFTN1-202ENST00000431547 HSPB11Q9Y547 144 aa13.88□□□□□ -0.19
RFTN1-202ENST00000431547 SELENOKQ9Y6D0 94 aa13.88□□□□□ -0.19
RFTN1-202ENST00000431547 IGHV3OR16-13A0A075B7E8 117 aa13.87□□□□□ -0.19
RFTN1-202ENST00000431547 IGHV3-74A0A0B4J1X5 117 aa13.87□□□□□ -0.19
RFTN1-202ENST00000431547 AGPAT2O15120 278 aa13.87□□□□□ -0.19
RFTN1-202ENST00000431547 GATA2P23769 480 aaPredicted RBP13.87□□□□□ -0.19
RFTN1-202ENST00000431547 EIF2B2P49770 351 aaKnown RBP13.87□□□□□ -0.19
RFTN1-202ENST00000431547 LYZP61626 148 aa13.87□□□□□ -0.19
RFTN1-202ENST00000431547 RAB31Q13636 194 aa13.87□□□□□ -0.19
RFTN1-202ENST00000431547 PRR25Q96S07 402 aa13.87□□□□□ -0.19
RFTN1-202ENST00000431547 MGST2Q99735 147 aa13.87□□□□□ -0.19
RFTN1-202ENST00000431547 PBDC1Q9BVG4 233 aa13.87□□□□□ -0.19
RFTN1-202ENST00000431547 PFDN2Q9UHV9 154 aa13.87□□□□□ -0.19
RFTN1-202ENST00000431547 SLC45A2Q9UMX9 530 aa13.87□□□□□ -0.19
RFTN1-202ENST00000431547 TSPAN4O14817 238 aa13.86□□□□□ -0.19
RFTN1-202ENST00000431547 FAM90A2PQ658T7 463 aa13.86□□□□□ -0.19
RFTN1-202ENST00000431547 ZNF546Q86UE3 836 aa13.86□□□□□ -0.19
RFTN1-202ENST00000431547 GRAMD2BQ96HH9 432 aa13.86□□□□□ -0.19
RFTN1-202ENST00000431547 MEGF8Q7Z7M0 2845 aa13.86□□□□□ -0.19
RFTN1-202ENST00000431547 IGHV3-66A0A0C4DH42 116 aa13.85□□□□□ -0.19
RFTN1-202ENST00000431547 UBE2L5PA0A1B0GUS4 154 aa13.85□□□□□ -0.19
RFTN1-202ENST00000431547 NUP62P37198 522 aaPredicted RBP13.85□□□□□ -0.19
RFTN1-202ENST00000431547 CAMLGP49069 296 aa13.85□□□□□ -0.19
RFTN1-202ENST00000431547 PLP1P60201 277 aa13.85□□□□□ -0.19
RFTN1-202ENST00000431547 CLINT1Q14677 625 aa13.85□□□□□ -0.19
RFTN1-202ENST00000431547 GUCA2BQ16661 112 aa13.85□□□□□ -0.19
RFTN1-202ENST00000431547 G3V3Q6 166 aa13.84□□□□□ -0.19
RFTN1-202ENST00000431547 K7EIL1 84 aa13.84□□□□□ -0.19
RFTN1-202ENST00000431547 BUB3O43684 328 aa13.84□□□□□ -0.19
RFTN1-202ENST00000431547 MPDU1O75352 247 aa13.84□□□□□ -0.19
RFTN1-202ENST00000431547 DFFBO76075 338 aa13.84□□□□□ -0.19
RFTN1-202ENST00000431547 LINC00869P0C866 280 aa13.84□□□□□ -0.19
RFTN1-202ENST00000431547 ORM2P19652 201 aa13.84□□□□□ -0.19
RFTN1-202ENST00000431547 C16orf54Q6UWD8 224 aa13.84□□□□□ -0.19
RFTN1-202ENST00000431547 TCF24Q7RTU0 167 aa13.84□□□□□ -0.19
RFTN1-202ENST00000431547 AQP10Q96PS8 301 aa13.84□□□□□ -0.19
RFTN1-202ENST00000431547 SPAG8Q99932 426 aaPredicted RBP13.84□□□□□ -0.19
RFTN1-202ENST00000431547 PXDC1Q5TGL8 231 aa13.83□□□□□ -0.2
RFTN1-202ENST00000431547 STPG3Q8N7X2 389 aa13.83□□□□□ -0.2
RFTN1-202ENST00000431547 ATP5SQ99766 215 aa13.83□□□□□ -0.2
RFTN1-202ENST00000431547 HYPMO75409 117 aa13.82□□□□□ -0.2
RFTN1-202ENST00000431547 FGF7P21781 194 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms