RNA–Protein interactions for RNA: ENST00000430711.5

COL28A1-202, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 5

Gene COL28A1, Length 2,323 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-202ENST00000430711 NUDT10Q8NFP7 164 aa5.76□□□□□ -1.49
COL28A1-202ENST00000430711 NUDT11Q96G61 164 aa5.76□□□□□ -1.49
COL28A1-202ENST00000430711 KCNS1Q96KK3 526 aa5.76□□□□□ -1.49
COL28A1-202ENST00000430711 MIEN1Q9BRT3 115 aa5.76□□□□□ -1.49
COL28A1-202ENST00000430711 VAMP8Q9BV40 100 aa5.76□□□□□ -1.49
COL28A1-202ENST00000430711 CLEC7AQ9BXN2 247 aa5.76□□□□□ -1.49
COL28A1-202ENST00000430711 GNB1LQ9BYB4 327 aa5.76□□□□□ -1.49
COL28A1-202ENST00000430711 SLC25A10Q9UBX3 287 aaPredicted RBP5.76□□□□□ -1.49
COL28A1-202ENST00000430711 IL19Q9UHD0 177 aa5.76□□□□□ -1.49
COL28A1-202ENST00000430711 ZNF785A8K8V0 405 aa5.75□□□□□ -1.49
COL28A1-202ENST00000430711 OVOL3O00110 214 aa5.75□□□□□ -1.49
COL28A1-202ENST00000430711 HYPMO75409 117 aa5.75□□□□□ -1.49
COL28A1-202ENST00000430711 THBDP07204 575 aa5.75□□□□□ -1.49
COL28A1-202ENST00000430711 C8orf88P0DMB2 117 aa5.75□□□□□ -1.49
COL28A1-202ENST00000430711 RAB7AP51149 207 aa5.75□□□□□ -1.49
COL28A1-202ENST00000430711 ZNF138P52744 262 aa5.75□□□□□ -1.49
COL28A1-202ENST00000430711 FOXA3P55318 350 aaPredicted RBP5.75□□□□□ -1.49
COL28A1-202ENST00000430711 SPATA45Q537H7 98 aa5.75□□□□□ -1.49
COL28A1-202ENST00000430711 C2orf83Q53S99 150 aa5.75□□□□□ -1.49
COL28A1-202ENST00000430711 TIMM23BQ5SRD1 257 aa5.75□□□□□ -1.49
COL28A1-202ENST00000430711 WFDC8Q8IUA0 241 aa5.75□□□□□ -1.49
COL28A1-202ENST00000430711 RBMXL3Q8N7X1 1067 aaKnown RBP5.75□□□□□ -1.49
COL28A1-202ENST00000430711 H1FXQ92522 213 aaKnown RBP5.75□□□□□ -1.49
COL28A1-202ENST00000430711 SAP30LQ9HAJ7 183 aa5.75□□□□□ -1.49
COL28A1-202ENST00000430711 MED13LQ71F56 2210 aa5.75□□□□□ -1.49
COL28A1-202ENST00000430711 ABCA4P78363 2273 aa5.75□□□□□ -1.49
COL28A1-202ENST00000430711 FAM87AP0C7U9 286 aa5.75□□□□□ -1.49
COL28A1-202ENST00000430711 USF1P22415 310 aaPredicted RBP5.75□□□□□ -1.49
COL28A1-202ENST00000430711 GATA4P43694 442 aa5.75□□□□□ -1.49
COL28A1-202ENST00000430711 ADIPOQQ15848 244 aa5.75□□□□□ -1.49
COL28A1-202ENST00000430711 LDLRAD2Q5SZI1 272 aa5.75□□□□□ -1.49
COL28A1-202ENST00000430711 FAM120AOSQ5T036 256 aa5.75□□□□□ -1.49
COL28A1-202ENST00000430711 PNKDQ8N490 385 aa5.75□□□□□ -1.49
COL28A1-202ENST00000430711 C11orf42Q8N5U0 333 aa5.75□□□□□ -1.49
COL28A1-202ENST00000430711 GTSF1Q8WW33 167 aa5.75□□□□□ -1.49
COL28A1-202ENST00000430711 SLC35E1Q96K37 410 aa5.75□□□□□ -1.49
COL28A1-202ENST00000430711 OSTCQ9NRP0 149 aa5.75□□□□□ -1.49
COL28A1-202ENST00000430711 PRNDQ9UKY0 176 aa5.75□□□□□ -1.49
COL28A1-202ENST00000430711 RAXQ9Y2V3 346 aa5.75□□□□□ -1.49
COL28A1-202ENST00000430711 S4R3C0 116 aa5.75□□□□□ -1.49
COL28A1-202ENST00000430711 CSMD2Q7Z408 3487 aa5.74□□□□□ -1.49
COL28A1-202ENST00000430711 DLEU1O43261 78 aa5.74□□□□□ -1.49
COL28A1-202ENST00000430711 ZNF324O75467 553 aaPredicted RBP5.74□□□□□ -1.49
COL28A1-202ENST00000430711 AMY1AP04745 511 aa5.74□□□□□ -1.49
COL28A1-202ENST00000430711 ORM2P19652 201 aa5.74□□□□□ -1.49
COL28A1-202ENST00000430711 KIR2DS2P43631 304 aa5.74□□□□□ -1.49
COL28A1-202ENST00000430711 BSPH1Q075Z2 132 aa5.74□□□□□ -1.49
COL28A1-202ENST00000430711 TIGITQ495A1 244 aa5.74□□□□□ -1.49
COL28A1-202ENST00000430711 LBHQ53QV2 105 aaPredicted RBP5.74□□□□□ -1.49
COL28A1-202ENST00000430711 CRYBG3Q68DQ2 2970 aa5.74□□□□□ -1.49
COL28A1-202ENST00000430711 C1orf174Q8IYL3 243 aa5.74□□□□□ -1.49
COL28A1-202ENST00000430711 SIGLECL1Q8N7X8 197 aa5.74□□□□□ -1.49
COL28A1-202ENST00000430711 CCL17Q92583 94 aa5.74□□□□□ -1.49
COL28A1-202ENST00000430711 TMEM68Q96MH6 324 aa5.74□□□□□ -1.49
COL28A1-202ENST00000430711 C17orf77Q96MU5 243 aa5.74□□□□□ -1.49
COL28A1-202ENST00000430711 PRORYQ9H606 182 aa5.74□□□□□ -1.49
COL28A1-202ENST00000430711 LINC00574Q9H8X3 128 aa5.74□□□□□ -1.49
COL28A1-202ENST00000430711 AMMECR1Q9Y4X0 333 aaPredicted RBP5.74□□□□□ -1.49
COL28A1-202ENST00000430711 A0A0G2JNJ9 132 aa5.74□□□□□ -1.49
COL28A1-202ENST00000430711 HIGD1CA8MV81 97 aa5.74□□□□□ -1.49
COL28A1-202ENST00000430711 PEX7O00628 323 aa5.74□□□□□ -1.49
COL28A1-202ENST00000430711 IGLC2P0DOY2 106 aa5.74□□□□□ -1.49
COL28A1-202ENST00000430711 IGLC3P0DOY3 106 aa5.74□□□□□ -1.49
COL28A1-202ENST00000430711 MYCNOSP40205 109 aa5.74□□□□□ -1.49
COL28A1-202ENST00000430711 ZNF137PP52743 207 aa5.74□□□□□ -1.49
COL28A1-202ENST00000430711 PAFAH1B2P68402 229 aa5.74□□□□□ -1.49
COL28A1-202ENST00000430711 RPL19P84098 196 aaKnown RBP5.74□□□□□ -1.49
COL28A1-202ENST00000430711 LCE1DQ5T752 114 aa5.74□□□□□ -1.49
COL28A1-202ENST00000430711 LINC00305Q7Z4B0 112 aa5.74□□□□□ -1.49
COL28A1-202ENST00000430711 OR5AN1Q8NGI8 311 aa5.74□□□□□ -1.49
COL28A1-202ENST00000430711 OR1L8Q8NGR8 309 aa5.74□□□□□ -1.49
COL28A1-202ENST00000430711 PPP1R35Q8TAP8 253 aa5.74□□□□□ -1.49
COL28A1-202ENST00000430711 ZC2HC1AQ96GY0 325 aa5.74□□□□□ -1.49
COL28A1-202ENST00000430711 PAXXQ9BUH6 204 aa5.74□□□□□ -1.49
COL28A1-202ENST00000430711 DNAJC4Q9NNZ3 241 aa5.74□□□□□ -1.49
COL28A1-202ENST00000430711 TMEM167BQ9NRX6 74 aa5.74□□□□□ -1.49
COL28A1-202ENST00000430711 BET1LQ9NYM9 111 aa5.74□□□□□ -1.49
COL28A1-202ENST00000430711 Q9UFV3 132 aa5.74□□□□□ -1.49
COL28A1-202ENST00000430711 ZNF257Q9Y2Q1 563 aa5.74□□□□□ -1.49
COL28A1-202ENST00000430711 CELSR2Q9HCU4 2923 aa5.73□□□□□ -1.49
COL28A1-202ENST00000430711 A0A1W2PRD5 423 aa5.73□□□□□ -1.49
COL28A1-202ENST00000430711 A0A1W2PRF3 423 aa5.73□□□□□ -1.49
COL28A1-202ENST00000430711 A0A1W2PRM7 423 aa5.73□□□□□ -1.49
COL28A1-202ENST00000430711 IGLC7A0M8Q6 106 aa5.73□□□□□ -1.49
COL28A1-202ENST00000430711 ITGB1BP1O14713 200 aa5.73□□□□□ -1.49
COL28A1-202ENST00000430711 LY6HO94772 140 aa5.73□□□□□ -1.49
COL28A1-202ENST00000430711 APCSP02743 223 aa5.73□□□□□ -1.49
COL28A1-202ENST00000430711 RPLP1P05386 114 aaKnown RBP5.73□□□□□ -1.49
COL28A1-202ENST00000430711 BTF3P20290 206 aaKnown RBP5.73□□□□□ -1.49
COL28A1-202ENST00000430711 LOXP28300 417 aaPredicted RBP5.73□□□□□ -1.49
COL28A1-202ENST00000430711 RAB31Q13636 194 aa5.73□□□□□ -1.49
COL28A1-202ENST00000430711 C21orf62-AS1Q17RA5 79 aa5.73□□□□□ -1.49
COL28A1-202ENST00000430711 RTL8BQ17RB0 113 aa5.73□□□□□ -1.49
COL28A1-202ENST00000430711 TMEM183BQ1AE95 376 aa5.73□□□□□ -1.49
COL28A1-202ENST00000430711 Q56UQ5 140 aa5.73□□□□□ -1.49
COL28A1-202ENST00000430711 TEX36Q5VZQ5 186 aa5.73□□□□□ -1.49
COL28A1-202ENST00000430711 UNQ5815/PRO19632Q6UWF5 114 aa5.73□□□□□ -1.49
COL28A1-202ENST00000430711 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.73□□□□□ -1.49
COL28A1-202ENST00000430711 OR1B1Q8NGR6 318 aa5.73□□□□□ -1.49
COL28A1-202ENST00000430711 KRTAP4-12Q9BQ66 201 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms