RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 J3KRW8 73 aa9.44□□□□□ -0.9
PTCH1-208ENST00000430669 F2Z2F3 143 aa9.44□□□□□ -0.9
PTCH1-208ENST00000430669 TGFAP01135 160 aa9.44□□□□□ -0.9
PTCH1-208ENST00000430669 PDE6HQ13956 83 aa9.44□□□□□ -0.9
PTCH1-208ENST00000430669 SPRY4Q9C004 299 aa9.44□□□□□ -0.9
PTCH1-208ENST00000430669 A0A1B0GWJ7 208 aa9.44□□□□□ -0.9
PTCH1-208ENST00000430669 TFF1P04155 84 aa9.44□□□□□ -0.9
PTCH1-208ENST00000430669 PRTN3P24158 256 aa9.44□□□□□ -0.9
PTCH1-208ENST00000430669 OR10J3Q5JRS4 329 aa9.44□□□□□ -0.9
PTCH1-208ENST00000430669 C12orf54Q6X4T0 127 aa9.44□□□□□ -0.9
PTCH1-208ENST00000430669 ERASQ7Z444 233 aa9.44□□□□□ -0.9
PTCH1-208ENST00000430669 OR10W1Q8NGF6 305 aa9.44□□□□□ -0.9
PTCH1-208ENST00000430669 RPLP1P05386 114 aaKnown RBP9.43□□□□□ -0.9
PTCH1-208ENST00000430669 FOXL1Q12952 345 aa9.43□□□□□ -0.9
PTCH1-208ENST00000430669 WDR86Q86TI4 376 aa9.43□□□□□ -0.9
PTCH1-208ENST00000430669 NPFFO15130 113 aa9.43□□□□□ -0.9
PTCH1-208ENST00000430669 TOMM40O96008 361 aa9.43□□□□□ -0.9
PTCH1-208ENST00000430669 C15orf62A8K5M9 175 aa9.43□□□□□ -0.9
PTCH1-208ENST00000430669 CBLN1P23435 193 aa9.43□□□□□ -0.9
PTCH1-208ENST00000430669 LEPP41159 167 aa9.43□□□□□ -0.9
PTCH1-208ENST00000430669 PAX8Q06710 450 aa9.43□□□□□ -0.9
PTCH1-208ENST00000430669 SLC25A39Q9BZJ4 359 aaPredicted RBP9.43□□□□□ -0.9
PTCH1-208ENST00000430669 CGB1A6NKQ9 187 aa9.43□□□□□ -0.9
PTCH1-208ENST00000430669 ASIPP42127 132 aa9.43□□□□□ -0.9
PTCH1-208ENST00000430669 SSC4DQ8WTU2 575 aa9.43□□□□□ -0.9
PTCH1-208ENST00000430669 CRXO43186 299 aaPredicted RBP9.43□□□□□ -0.9
PTCH1-208ENST00000430669 HTN1P15515 57 aa9.43□□□□□ -0.9
PTCH1-208ENST00000430669 LINC01559Q495D7 138 aa9.43□□□□□ -0.9
PTCH1-208ENST00000430669 SPATA45Q537H7 98 aa9.43□□□□□ -0.9
PTCH1-208ENST00000430669 LINC01356Q8N9X3 169 aa9.43□□□□□ -0.9
PTCH1-208ENST00000430669 PRO1933Q9H354 126 aa9.43□□□□□ -0.9
PTCH1-208ENST00000430669 AP5S1Q9NUS5 200 aa9.43□□□□□ -0.9
PTCH1-208ENST00000430669 FAM215AQ9Y5M1 114 aa9.43□□□□□ -0.9
PTCH1-208ENST00000430669 DMRT1Q9Y5R6 373 aa9.43□□□□□ -0.9
PTCH1-208ENST00000430669 IGKV1-6A0A0C4DH72 117 aa9.43□□□□□ -0.9
PTCH1-208ENST00000430669 UBE2L6O14933 153 aa9.43□□□□□ -0.9
PTCH1-208ENST00000430669 GNLYP22749 145 aa9.43□□□□□ -0.9
PTCH1-208ENST00000430669 EIF3GO75821 320 aaKnown RBP eCLIP9.42□□□□□ -0.9
PTCH1-208ENST00000430669 HIST1H1AQ02539 215 aaPredicted RBP9.42□□□□□ -0.9
PTCH1-208ENST00000430669 A6NNC1 897 aa9.42□□□□□ -0.9
PTCH1-208ENST00000430669 SCGB1D4Q6XE38 83 aa9.42□□□□□ -0.9
PTCH1-208ENST00000430669 SIGLEC15Q6ZMC9 328 aa9.42□□□□□ -0.9
PTCH1-208ENST00000430669 ORMDL3Q8N138 153 aa9.42□□□□□ -0.9
PTCH1-208ENST00000430669 TRAV41A0A0B4J266 112 aa9.42□□□□□ -0.9
PTCH1-208ENST00000430669 TRAV40A0A0B4J280 105 aa9.42□□□□□ -0.9
PTCH1-208ENST00000430669 ZNF503-AS2A6NEH8 195 aa9.42□□□□□ -0.9
PTCH1-208ENST00000430669 LHBP01229 141 aa9.42□□□□□ -0.9
PTCH1-208ENST00000430669 TMEM170AQ8WVE7 144 aa9.42□□□□□ -0.9
PTCH1-208ENST00000430669 NOTCH3Q9UM47 2321 aa9.42□□□□□ -0.9
PTCH1-208ENST00000430669 FABP5P3A8MUU1 101 aa9.42□□□□□ -0.9
PTCH1-208ENST00000430669 SELLP14151 372 aa9.42□□□□□ -0.9
PTCH1-208ENST00000430669 Q6ZR03 302 aa9.42□□□□□ -0.9
PTCH1-208ENST00000430669 OR5AN1Q8NGI8 311 aa9.42□□□□□ -0.9
PTCH1-208ENST00000430669 NEU1Q99519 415 aa9.42□□□□□ -0.9
PTCH1-208ENST00000430669 C15orf65H3BRN8 121 aa9.42□□□□□ -0.9
PTCH1-208ENST00000430669 CMC4P56277 68 aaPredicted RBP9.42□□□□□ -0.9
PTCH1-208ENST00000430669 LEMD1Q68G75 181 aa9.42□□□□□ -0.9
PTCH1-208ENST00000430669 MED13LQ71F56 2210 aa9.41□□□□□ -0.9
PTCH1-208ENST00000430669 TRBV24-1A0A075B6N3 115 aa9.41□□□□□ -0.9
PTCH1-208ENST00000430669 UBE2E1P51965 193 aa9.41□□□□□ -0.9
PTCH1-208ENST00000430669 ZNF585BQ52M93 769 aa9.41□□□□□ -0.9
PTCH1-208ENST00000430669 CENPFP49454 3210 aa9.41□□□□□ -0.9
PTCH1-208ENST00000430669 SCGB1C2P0DMR2 95 aa9.41□□□□□ -0.9
PTCH1-208ENST00000430669 C15orf32Q32M92 178 aa9.41□□□□□ -0.9
PTCH1-208ENST00000430669 FER1L6-AS1Q8NA97 138 aa9.41□□□□□ -0.9
PTCH1-208ENST00000430669 LYNX1G3V0Z9 82 aa9.41□□□□□ -0.9
PTCH1-208ENST00000430669 LYNX1P0DP58 116 aa9.41□□□□□ -0.9
PTCH1-208ENST00000430669 SRSF3P84103 164 aaKnown RBP9.41□□□□□ -0.9
PTCH1-208ENST00000430669 C17orf58Q2M2W7 97 aa9.41□□□□□ -0.9
PTCH1-208ENST00000430669 ZNF581Q9P0T4 197 aa9.41□□□□□ -0.9
PTCH1-208ENST00000430669 IGHV3OR16-10A0A075B7F0 116 aa9.41□□□□□ -0.9
PTCH1-208ENST00000430669 PPBPP02775 128 aa9.41□□□□□ -0.9
PTCH1-208ENST00000430669 Q1RN00 199 aa9.41□□□□□ -0.9
PTCH1-208ENST00000430669 OVOL1O14753 267 aa9.41□□□□□ -0.9
PTCH1-208ENST00000430669 ATP5LO75964 103 aa9.4□□□□□ -0.9
PTCH1-208ENST00000430669 LINC00518Q8N0U6 118 aa9.4□□□□□ -0.9
PTCH1-208ENST00000430669 IFITM10A6NMD0 228 aa9.4□□□□□ -0.9
PTCH1-208ENST00000430669 COL5A1-AS1Q5SY13 56 aa9.4□□□□□ -0.9
PTCH1-208ENST00000430669 ZNF418Q8TF45 676 aaPredicted RBP9.4□□□□□ -0.9
PTCH1-208ENST00000430669 TSKUQ8WUA8 353 aa9.4□□□□□ -0.9
PTCH1-208ENST00000430669 NDUFA4L2Q9NRX3 87 aa9.4□□□□□ -0.9
PTCH1-208ENST00000430669 LINC01549A6NIU2 74 aa9.4□□□□□ -0.9
PTCH1-208ENST00000430669 DUSP14O95147 198 aaKnown RBP9.4□□□□□ -0.9
PTCH1-208ENST00000430669 IGHV3-23P01764 117 aa9.4□□□□□ -0.9
PTCH1-208ENST00000430669 UQCRFS1P47985 274 aa9.4□□□□□ -0.9
PTCH1-208ENST00000430669 RPP25LQ8N5L8 163 aaKnown RBP9.4□□□□□ -0.9
PTCH1-208ENST00000430669 TRAV34A0A0B4J273 112 aa9.4□□□□□ -0.9
PTCH1-208ENST00000430669 RNASE2P10153 161 aaKnown RBP9.4□□□□□ -0.91
PTCH1-208ENST00000430669 C1orf122Q6ZSJ8 110 aa9.4□□□□□ -0.91
PTCH1-208ENST00000430669 PF4P02776 101 aa9.4□□□□□ -0.91
PTCH1-208ENST00000430669 UBE2CO00762 179 aa9.39□□□□□ -0.91
PTCH1-208ENST00000430669 NDUFB8O95169 186 aa9.39□□□□□ -0.91
PTCH1-208ENST00000430669 SNRPCP09234 159 aaKnown RBP9.39□□□□□ -0.91
PTCH1-208ENST00000430669 TEX38Q6PEX7 206 aa9.39□□□□□ -0.91
PTCH1-208ENST00000430669 LYPD2Q6UXB3 125 aa9.39□□□□□ -0.91
PTCH1-208ENST00000430669 CHCHD1Q96BP2 118 aaKnown RBP9.39□□□□□ -0.91
PTCH1-208ENST00000430669 C10orf142B7Z368 130 aa9.39□□□□□ -0.91
PTCH1-208ENST00000430669 PSG1P11464 419 aa9.39□□□□□ -0.91
PTCH1-208ENST00000430669 TFPI2P48307 235 aa9.39□□□□□ -0.91
PTCH1-208ENST00000430669 DLX1P56177 255 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms