RNA–Protein interactions for RNA: ENST00000430158.5

USP40-205, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 1,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-205ENST00000430158 IZUMO1RA6ND01 250 aa9.37□□□□□ -0.91
USP40-205ENST00000430158 ZNF207O43670 478 aaKnown RBP9.37□□□□□ -0.91
USP40-205ENST00000430158 CST7O76096 145 aa9.37□□□□□ -0.91
USP40-205ENST00000430158 GIPP09681 153 aaPredicted RBP9.37□□□□□ -0.91
USP40-205ENST00000430158 PSG1P11464 419 aa9.37□□□□□ -0.91
USP40-205ENST00000430158 PVALBP20472 110 aaPredicted RBP9.37□□□□□ -0.91
USP40-205ENST00000430158 CAV2P51636 162 aa9.37□□□□□ -0.91
USP40-205ENST00000430158 LILRB2Q8N423 598 aa9.37□□□□□ -0.91
USP40-205ENST00000430158 OR10P1Q8NGE3 313 aa9.37□□□□□ -0.91
USP40-205ENST00000430158 ASB13Q8WXK3 278 aa9.37□□□□□ -0.91
USP40-205ENST00000430158 MARC2Q969Z3 335 aa9.37□□□□□ -0.91
USP40-205ENST00000430158 VSIRQ9H7M9 311 aa9.37□□□□□ -0.91
USP40-205ENST00000430158 MBD2Q9UBB5 411 aa9.37□□□□□ -0.91
USP40-205ENST00000430158 SMPXQ9UHP9 88 aa9.37□□□□□ -0.91
USP40-205ENST00000430158 IGHV7-4-1A0A0J9YVY3 117 aa9.36□□□□□ -0.91
USP40-205ENST00000430158 ZNF785A8K8V0 405 aa9.36□□□□□ -0.91
USP40-205ENST00000430158 CHEK1O14757 476 aa9.36□□□□□ -0.91
USP40-205ENST00000430158 APOHP02749 345 aaPredicted RBP9.36□□□□□ -0.91
USP40-205ENST00000430158 RLN2P04090 185 aa9.36□□□□□ -0.91
USP40-205ENST00000430158 RD3LP0DJH9 198 aa9.36□□□□□ -0.91
USP40-205ENST00000430158 CRYBB3P26998 211 aa9.36□□□□□ -0.91
USP40-205ENST00000430158 BCAP31P51572 246 aa9.36□□□□□ -0.91
USP40-205ENST00000430158 EWSR1Q01844 656 aaKnown RBP eCLIP9.36□□□□□ -0.91
USP40-205ENST00000430158 NHLH2Q02577 135 aa9.36□□□□□ -0.91
USP40-205ENST00000430158 SLC38A11Q08AI6 406 aa9.36□□□□□ -0.91
USP40-205ENST00000430158 USF2Q15853 346 aaPredicted RBP9.36□□□□□ -0.91
USP40-205ENST00000430158 CD300EQ496F6 205 aaPredicted RBP9.36□□□□□ -0.91
USP40-205ENST00000430158 STPG3Q8N7X2 389 aa9.36□□□□□ -0.91
USP40-205ENST00000430158 C20orf24Q9BUV8 137 aa9.36□□□□□ -0.91
USP40-205ENST00000430158 TECRQ9NZ01 308 aaKnown RBP9.36□□□□□ -0.91
USP40-205ENST00000430158 ZFP92A6NM28 416 aa9.35□□□□□ -0.91
USP40-205ENST00000430158 YIF1AO95070 293 aa9.35□□□□□ -0.91
USP40-205ENST00000430158 PRB2P02812 416 aaPredicted RBP9.35□□□□□ -0.91
USP40-205ENST00000430158 RAP2BP61225 183 aa9.35□□□□□ -0.91
USP40-205ENST00000430158 FAM90A2PQ658T7 463 aa9.35□□□□□ -0.91
USP40-205ENST00000430158 TMEM217Q8N7C4 229 aa9.35□□□□□ -0.91
USP40-205ENST00000430158 OR2K2Q8NGT1 345 aa9.35□□□□□ -0.91
USP40-205ENST00000430158 Q8WTZ3 238 aa9.35□□□□□ -0.91
USP40-205ENST00000430158 NPVFQ9HCQ7 196 aa9.35□□□□□ -0.91
USP40-205ENST00000430158 AURKAIP1Q9NWT8 199 aaPredicted RBP9.35□□□□□ -0.91
USP40-205ENST00000430158 SCGB2A1O75556 95 aa9.34□□□□□ -0.91
USP40-205ENST00000430158 GATA2P23769 480 aaPredicted RBP9.34□□□□□ -0.91
USP40-205ENST00000430158 S100A11P31949 105 aa9.34□□□□□ -0.91
USP40-205ENST00000430158 BTNL8Q6UX41 500 aa9.34□□□□□ -0.91
USP40-205ENST00000430158 TMEM61Q8N0U2 210 aa9.34□□□□□ -0.91
USP40-205ENST00000430158 OR51G1Q8NGK1 321 aa9.34□□□□□ -0.91
USP40-205ENST00000430158 RHPN1-AS1Q9BWJ2 59 aa9.34□□□□□ -0.91
USP40-205ENST00000430158 SLC25A31Q9H0C2 315 aa9.34□□□□□ -0.91
USP40-205ENST00000430158 SLC45A2Q9UMX9 530 aa9.34□□□□□ -0.91
USP40-205ENST00000430158 WDR83OSQ9Y284 106 aa9.34□□□□□ -0.91
USP40-205ENST00000430158 SELENOKQ9Y6D0 94 aa9.34□□□□□ -0.91
USP40-205ENST00000430158 IGHV3-49A0A0A0MS15 119 aa9.33□□□□□ -0.92
USP40-205ENST00000430158 K7EIL1 84 aa9.33□□□□□ -0.92
USP40-205ENST00000430158 IL4P05112 153 aa9.33□□□□□ -0.92
USP40-205ENST00000430158 PET100P0DJ07 73 aa9.33□□□□□ -0.92
USP40-205ENST00000430158 PLP1P60201 277 aa9.33□□□□□ -0.92
USP40-205ENST00000430158 AKR1C1Q04828 323 aa9.33□□□□□ -0.92
USP40-205ENST00000430158 BAXQ07812 192 aa9.33□□□□□ -0.92
USP40-205ENST00000430158 OR2F1Q13607 317 aa9.33□□□□□ -0.92
USP40-205ENST00000430158 TEPPQ6URK8 271 aa9.33□□□□□ -0.92
USP40-205ENST00000430158 CYP2G1PQ6ZSU1 146 aa9.33□□□□□ -0.92
USP40-205ENST00000430158 STX12Q86Y82 276 aa9.33□□□□□ -0.92
USP40-205ENST00000430158 Q8N1Y9 231 aa9.33□□□□□ -0.92
USP40-205ENST00000430158 ST8SIA2Q92186 375 aa9.33□□□□□ -0.92
USP40-205ENST00000430158 RNF125Q96EQ8 232 aa9.33□□□□□ -0.92
USP40-205ENST00000430158 RNF2Q99496 336 aa9.33□□□□□ -0.92
USP40-205ENST00000430158 MGST2Q99735 147 aa9.33□□□□□ -0.92
USP40-205ENST00000430158 GINS3Q9BRX5 216 aa9.33□□□□□ -0.92
USP40-205ENST00000430158 TMEM147Q9BVK8 224 aa9.33□□□□□ -0.92
USP40-205ENST00000430158 ZNF256Q9Y2P7 627 aaPredicted RBP9.33□□□□□ -0.92
USP40-205ENST00000430158 HSPB11Q9Y547 144 aa9.33□□□□□ -0.92
USP40-205ENST00000430158 IGHV3OR16-13A0A075B7E8 117 aa9.32□□□□□ -0.92
USP40-205ENST00000430158 IGHV3-74A0A0B4J1X5 117 aa9.32□□□□□ -0.92
USP40-205ENST00000430158 TRAV25A0A0B4J276 109 aa9.32□□□□□ -0.92
USP40-205ENST00000430158 SMCO3A2RU48 225 aa9.32□□□□□ -0.92
USP40-205ENST00000430158 LINC00869P0C866 280 aa9.32□□□□□ -0.92
USP40-205ENST00000430158 NPPCP23582 126 aa9.32□□□□□ -0.92
USP40-205ENST00000430158 RPL12P30050 165 aaKnown RBP9.32□□□□□ -0.92
USP40-205ENST00000430158 HBG1P69891 147 aa9.32□□□□□ -0.92
USP40-205ENST00000430158 HBG2P69892 147 aa9.32□□□□□ -0.92
USP40-205ENST00000430158 DEFA6Q01524 100 aa9.32□□□□□ -0.92
USP40-205ENST00000430158 ATP6V1FQ16864 119 aa9.32□□□□□ -0.92
USP40-205ENST00000430158 OR5C1Q8NGR4 320 aa9.32□□□□□ -0.92
USP40-205ENST00000430158 OR2T35Q8NGX2 323 aa9.32□□□□□ -0.92
USP40-205ENST00000430158 PRR25Q96S07 402 aa9.32□□□□□ -0.92
USP40-205ENST00000430158 WFDC1Q9HC57 220 aa9.32□□□□□ -0.92
USP40-205ENST00000430158 UQCC1Q9NVA1 299 aa9.32□□□□□ -0.92
USP40-205ENST00000430158 TGP01266 2768 aa9.32□□□□□ -0.92
USP40-205ENST00000430158 TSPAN4O14817 238 aa9.31□□□□□ -0.92
USP40-205ENST00000430158 AGPAT2O15120 278 aa9.31□□□□□ -0.92
USP40-205ENST00000430158 BUB3O43684 328 aa9.31□□□□□ -0.92
USP40-205ENST00000430158 CFDP00746 253 aaPredicted RBP9.31□□□□□ -0.92
USP40-205ENST00000430158 FABP1P07148 127 aa9.31□□□□□ -0.92
USP40-205ENST00000430158 HNRNPCP07910 306 aaKnown RBP eCLIP9.31□□□□□ -0.92
USP40-205ENST00000430158 GP9P14770 177 aa9.31□□□□□ -0.92
USP40-205ENST00000430158 SELENOTP62341 195 aa9.31□□□□□ -0.92
USP40-205ENST00000430158 LCN12Q6JVE5 192 aa9.31□□□□□ -0.92
USP40-205ENST00000430158 C16orf54Q6UWD8 224 aa9.31□□□□□ -0.92
USP40-205ENST00000430158 PATE2Q6UY27 113 aa9.31□□□□□ -0.92
USP40-205ENST00000430158 THAP6Q8TBB0 222 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms