RNA–Protein interactions for RNA: ENST00000429544.6

MBD4-203, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD4, Length 2,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-203ENST00000429544 RANP62826 216 aaKnown RBP12.85□□□□□ -0.35
MBD4-203ENST00000429544 STXBP6Q8NFX7 210 aa12.85□□□□□ -0.35
MBD4-203ENST00000429544 OR10D4PQ8NGN7 298 aa12.85□□□□□ -0.35
MBD4-203ENST00000429544 RASL11BQ9BPW5 248 aa12.85□□□□□ -0.35
MBD4-203ENST00000429544 HIGD1AQ9Y241 93 aa12.85□□□□□ -0.35
MBD4-203ENST00000429544 TRAPPC1Q9Y5R8 145 aa12.85□□□□□ -0.35
MBD4-203ENST00000429544 OOSP1A8MZH6 123 aa12.84□□□□□ -0.35
MBD4-203ENST00000429544 CNN1P51911 297 aaKnown RBP12.84□□□□□ -0.35
MBD4-203ENST00000429544 RPEL1Q2QD12 228 aa12.84□□□□□ -0.35
MBD4-203ENST00000429544 KLF17Q5JT82 389 aaPredicted RBP12.84□□□□□ -0.35
MBD4-203ENST00000429544 NHLRC2Q8NBF2 726 aa12.84□□□□□ -0.35
MBD4-203ENST00000429544 TRAV34A0A0B4J273 112 aa12.84□□□□□ -0.35
MBD4-203ENST00000429544 GCGP01275 180 aa12.84□□□□□ -0.35
MBD4-203ENST00000429544 FABP4P15090 132 aa12.84□□□□□ -0.35
MBD4-203ENST00000429544 LMO4P61968 165 aa12.84□□□□□ -0.35
MBD4-203ENST00000429544 GNG5P63218 68 aa12.84□□□□□ -0.35
MBD4-203ENST00000429544 RBM14Q96PK6 669 aaKnown RBP12.84□□□□□ -0.35
MBD4-203ENST00000429544 GP9P14770 177 aa12.83□□□□□ -0.36
MBD4-203ENST00000429544 NDPQ00604 133 aa12.83□□□□□ -0.36
MBD4-203ENST00000429544 TMEM183AQ8IXX5 376 aa12.83□□□□□ -0.36
MBD4-203ENST00000429544 Q8N6K4 173 aa12.83□□□□□ -0.36
MBD4-203ENST00000429544 ARPC1AQ92747 370 aa12.83□□□□□ -0.36
MBD4-203ENST00000429544 TBX15Q96SF7 602 aa12.83□□□□□ -0.36
MBD4-203ENST00000429544 CDC42EP3Q9UKI2 254 aa12.83□□□□□ -0.36
MBD4-203ENST00000429544 H3BTX0 84 aa12.83□□□□□ -0.36
MBD4-203ENST00000429544 IGKV1-17P01599 117 aa12.83□□□□□ -0.36
MBD4-203ENST00000429544 TMEM11P17152 192 aa12.83□□□□□ -0.36
MBD4-203ENST00000429544 TAS2R60P59551 318 aa12.83□□□□□ -0.36
MBD4-203ENST00000429544 CX3CL1P78423 397 aa12.83□□□□□ -0.36
MBD4-203ENST00000429544 S4R3C0 116 aa12.83□□□□□ -0.36
MBD4-203ENST00000429544 SLC25A5P05141 298 aaKnown RBP12.82□□□□□ -0.36
MBD4-203ENST00000429544 NBEAP1P0C6P0 100 aa12.82□□□□□ -0.36
MBD4-203ENST00000429544 MYCNOSP40205 109 aa12.82□□□□□ -0.36
MBD4-203ENST00000429544 ASPHD1Q5U4P2 390 aa12.82□□□□□ -0.36
MBD4-203ENST00000429544 OR1L6Q8NGR2 347 aa12.82□□□□□ -0.36
MBD4-203ENST00000429544 OSTCQ9NRP0 149 aa12.82□□□□□ -0.36
MBD4-203ENST00000429544 TRAV9-1A0A075B6T8 112 aa12.82□□□□□ -0.36
MBD4-203ENST00000429544 OVOL3O00110 214 aa12.82□□□□□ -0.36
MBD4-203ENST00000429544 PYY3Q5JQD4 70 aa12.82□□□□□ -0.36
MBD4-203ENST00000429544 RPH3ALQ9UNE2 315 aa12.82□□□□□ -0.36
MBD4-203ENST00000429544 ASH1LQ9NR48 2969 aaKnown RBP12.82□□□□□ -0.36
MBD4-203ENST00000429544 PGPA6NDG6 321 aa12.81□□□□□ -0.36
MBD4-203ENST00000429544 TMEM8BA6NDV4 472 aa12.81□□□□□ -0.36
MBD4-203ENST00000429544 IGHV4-39P01824 125 aa12.81□□□□□ -0.36
MBD4-203ENST00000429544 RD3LP0DJH9 198 aa12.81□□□□□ -0.36
MBD4-203ENST00000429544 HIST1H1BP16401 226 aaKnown RBP12.81□□□□□ -0.36
MBD4-203ENST00000429544 EBI3Q14213 229 aa12.81□□□□□ -0.36
MBD4-203ENST00000429544 ZNF562Q6V9R5 426 aa12.81□□□□□ -0.36
MBD4-203ENST00000429544 OR8I2Q8N0Y5 310 aa12.81□□□□□ -0.36
MBD4-203ENST00000429544 SLC25A39Q9BZJ4 359 aaPredicted RBP12.81□□□□□ -0.36
MBD4-203ENST00000429544 LPAR2Q9HBW0 351 aa12.81□□□□□ -0.36
MBD4-203ENST00000429544 ISLRO14498 428 aa12.81□□□□□ -0.36
MBD4-203ENST00000429544 FAM120AOSQ5T036 256 aa12.81□□□□□ -0.36
MBD4-203ENST00000429544 IBA57Q5T440 356 aaKnown RBP12.81□□□□□ -0.36
MBD4-203ENST00000429544 HIST1H2BLQ99880 126 aa12.81□□□□□ -0.36
MBD4-203ENST00000429544 EPDR1Q9UM22 224 aa12.81□□□□□ -0.36
MBD4-203ENST00000429544 TBL2Q9Y4P3 447 aaKnown RBP12.81□□□□□ -0.36
MBD4-203ENST00000429544 NPIPB5A8MRT5 1133 aa12.8□□□□□ -0.36
MBD4-203ENST00000429544 UBE2E1P51965 193 aa12.8□□□□□ -0.36
MBD4-203ENST00000429544 COA6Q5JTJ3 125 aaKnown RBP12.8□□□□□ -0.36
MBD4-203ENST00000429544 ZNF600Q6ZNG1 722 aa12.8□□□□□ -0.36
MBD4-203ENST00000429544 CBLN1P23435 193 aa12.8□□□□□ -0.36
MBD4-203ENST00000429544 ADMP35318 185 aa12.8□□□□□ -0.36
MBD4-203ENST00000429544 BAGE2Q86Y30 109 aa12.8□□□□□ -0.36
MBD4-203ENST00000429544 FANCD2OSQ96PS1 177 aa12.8□□□□□ -0.36
MBD4-203ENST00000429544 SERTAD4Q9NUC0 356 aa12.8□□□□□ -0.36
MBD4-203ENST00000429544 FABP1P07148 127 aa12.79□□□□□ -0.36
MBD4-203ENST00000429544 TCL1AP56279 114 aa12.79□□□□□ -0.36
MBD4-203ENST00000429544 AJUBAQ96IF1 538 aa12.79□□□□□ -0.36
MBD4-203ENST00000429544 PACRGQ96M98 296 aaPredicted RBP12.79□□□□□ -0.36
MBD4-203ENST00000429544 IGLV11-55A0A075B6I3 123 aa12.79□□□□□ -0.36
MBD4-203ENST00000429544 SAA4P35542 130 aa12.79□□□□□ -0.36
MBD4-203ENST00000429544 PDLIM4P50479 330 aa12.79□□□□□ -0.36
MBD4-203ENST00000429544 YPEL3P61236 119 aaPredicted RBP12.79□□□□□ -0.36
MBD4-203ENST00000429544 UBE2G1P62253 170 aa12.79□□□□□ -0.36
MBD4-203ENST00000429544 SGK494Q96LW2 274 aa12.79□□□□□ -0.36
MBD4-203ENST00000429544 Q9H3A6 140 aa12.79□□□□□ -0.36
MBD4-203ENST00000429544 MRPL27Q9P0M9 148 aaKnown RBP12.79□□□□□ -0.36
MBD4-203ENST00000429544 FRMD6-AS1P0C7T7 363 aa12.78□□□□□ -0.36
MBD4-203ENST00000429544 S100A12P80511 92 aa12.78□□□□□ -0.36
MBD4-203ENST00000429544 CDPF1Q6NVV7 123 aa12.78□□□□□ -0.36
MBD4-203ENST00000429544 CFAP46Q8IYW2 2715 aa12.78□□□□□ -0.36
MBD4-203ENST00000429544 ZNF705GA8MUZ8 300 aaPredicted RBP12.78□□□□□ -0.36
MBD4-203ENST00000429544 SPINK4O60575 86 aa12.78□□□□□ -0.36
MBD4-203ENST00000429544 TOMM40O96008 361 aa12.78□□□□□ -0.36
MBD4-203ENST00000429544 AMBPP02760 352 aa12.78□□□□□ -0.36
MBD4-203ENST00000429544 FAM106CPP0CH98 169 aa12.78□□□□□ -0.36
MBD4-203ENST00000429544 IER3P46695 156 aa12.78□□□□□ -0.36
MBD4-203ENST00000429544 TMEM183BQ1AE95 376 aa12.78□□□□□ -0.36
MBD4-203ENST00000429544 TTC9CQ8N5M4 171 aa12.78□□□□□ -0.36
MBD4-203ENST00000429544 Q8N9W7 124 aa12.78□□□□□ -0.36
MBD4-203ENST00000429544 GNG7O60262 68 aa12.77□□□□□ -0.37
MBD4-203ENST00000429544 GSN-AS1Q9NRJ2 163 aa12.77□□□□□ -0.37
MBD4-203ENST00000429544 ZNF586Q9NXT0 402 aa12.77□□□□□ -0.37
MBD4-203ENST00000429544 IGHV7-81A0A0B4J1V7 117 aa12.77□□□□□ -0.37
MBD4-203ENST00000429544 IL4P05112 153 aa12.77□□□□□ -0.37
MBD4-203ENST00000429544 SLC35B1P78383 322 aa12.77□□□□□ -0.37
MBD4-203ENST00000429544 C5orf17Q8NAS9 161 aa12.77□□□□□ -0.37
MBD4-203ENST00000429544 MRPL18Q9H0U6 180 aaKnown RBP12.77□□□□□ -0.37
MBD4-203ENST00000429544 TMEM14CQ9P0S9 112 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms