RNA–Protein interactions for RNA: ENST00000429490.5

SGMS1-203, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-203ENST00000429490 GPR82Q96P67 336 aa11.2□□□□□ -0.62
SGMS1-203ENST00000429490 C19orf24Q9BVV8 132 aa11.2□□□□□ -0.62
SGMS1-203ENST00000429490 TP73-AS1Q9UF72 201 aa11.2□□□□□ -0.62
SGMS1-203ENST00000429490 HIGD1AQ9Y241 93 aa11.2□□□□□ -0.62
SGMS1-203ENST00000429490 LSM4Q9Y4Z0 139 aaKnown RBP11.2□□□□□ -0.62
SGMS1-203ENST00000429490 RNASE2P10153 161 aaKnown RBP11.2□□□□□ -0.62
SGMS1-203ENST00000429490 CSN1S1P47710 185 aa11.2□□□□□ -0.62
SGMS1-203ENST00000429490 TM4SF20Q53R12 229 aa11.2□□□□□ -0.62
SGMS1-203ENST00000429490 LDLRAD2Q5SZI1 272 aa11.2□□□□□ -0.62
SGMS1-203ENST00000429490 SPACA3Q8IXA5 215 aa11.2□□□□□ -0.62
SGMS1-203ENST00000429490 ONECUT1Q9UBC0 465 aa11.2□□□□□ -0.62
SGMS1-203ENST00000429490 EPDR1Q9UM22 224 aa11.2□□□□□ -0.62
SGMS1-203ENST00000429490 A0A1W2PNU3 283 aaPredicted RBP11.19□□□□□ -0.62
SGMS1-203ENST00000429490 FBLN7Q53RD9 439 aa11.19□□□□□ -0.62
SGMS1-203ENST00000429490 SP5Q6BEB4 398 aaPredicted RBP11.19□□□□□ -0.62
SGMS1-203ENST00000429490 CIARTQ8N365 385 aaPredicted RBP11.19□□□□□ -0.62
SGMS1-203ENST00000429490 FAM90A9PA6NNJ1 464 aa11.19□□□□□ -0.62
SGMS1-203ENST00000429490 IGLL1P15814 213 aa11.19□□□□□ -0.62
SGMS1-203ENST00000429490 EXOC3-AS1Q8N2X6 119 aa11.19□□□□□ -0.62
SGMS1-203ENST00000429490 OSR1Q8TAX0 266 aaPredicted RBP11.19□□□□□ -0.62
SGMS1-203ENST00000429490 RPP21Q9H633 154 aaKnown RBP11.19□□□□□ -0.62
SGMS1-203ENST00000429490 RPUSD1Q9UJJ7 312 aaKnown RBP11.19□□□□□ -0.62
SGMS1-203ENST00000429490 NCBP2LA6PVI3 153 aaKnown RBP11.18□□□□□ -0.62
SGMS1-203ENST00000429490 IGHV1-46P01743 117 aa11.18□□□□□ -0.62
SGMS1-203ENST00000429490 LINC00614P0C842 121 aa11.18□□□□□ -0.62
SGMS1-203ENST00000429490 PRR20EP86478 221 aa11.18□□□□□ -0.62
SGMS1-203ENST00000429490 PRR20CP86479 221 aa11.18□□□□□ -0.62
SGMS1-203ENST00000429490 PRR20DP86480 221 aa11.18□□□□□ -0.62
SGMS1-203ENST00000429490 PRR20BP86481 221 aa11.18□□□□□ -0.62
SGMS1-203ENST00000429490 PRR20AP86496 221 aa11.18□□□□□ -0.62
SGMS1-203ENST00000429490 HILPDAQ9Y5L2 63 aa11.18□□□□□ -0.62
SGMS1-203ENST00000429490 F11RQ9Y624 299 aaKnown RBP11.18□□□□□ -0.62
SGMS1-203ENST00000429490 CD59P13987 128 aa11.18□□□□□ -0.62
SGMS1-203ENST00000429490 DIAPH2-AS1Q14236 149 aa11.18□□□□□ -0.62
SGMS1-203ENST00000429490 C17orf58Q2M2W7 97 aa11.18□□□□□ -0.62
SGMS1-203ENST00000429490 NEUROG1Q92886 237 aa11.18□□□□□ -0.62
SGMS1-203ENST00000429490 Q9H3A6 140 aa11.18□□□□□ -0.62
SGMS1-203ENST00000429490 FBXL15Q9H469 300 aa11.18□□□□□ -0.62
SGMS1-203ENST00000429490 AP5S1Q9NUS5 200 aa11.18□□□□□ -0.62
SGMS1-203ENST00000429490 APOHP02749 345 aaPredicted RBP11.18□□□□□ -0.62
SGMS1-203ENST00000429490 C1orf229Q6ZS94 237 aaPredicted RBP11.18□□□□□ -0.62
SGMS1-203ENST00000429490 C5orf17Q8NAS9 161 aa11.18□□□□□ -0.62
SGMS1-203ENST00000429490 HSPB8Q9UJY1 196 aa11.18□□□□□ -0.62
SGMS1-203ENST00000429490 A0A087X0K7 114 aa11.17□□□□□ -0.62
SGMS1-203ENST00000429490 SFTPCP11686 197 aa11.17□□□□□ -0.62
SGMS1-203ENST00000429490 CACNG8Q8WXS5 425 aa11.17□□□□□ -0.62
SGMS1-203ENST00000429490 OTOGLQ3ZCN5 2332 aa11.17□□□□□ -0.62
SGMS1-203ENST00000429490 A0A1B0GWJ7 208 aa11.17□□□□□ -0.62
SGMS1-203ENST00000429490 F2RL2O00254 374 aa11.17□□□□□ -0.62
SGMS1-203ENST00000429490 FCGR2BP31994 310 aaPredicted RBP11.17□□□□□ -0.62
SGMS1-203ENST00000429490 TIMM23BQ5SRD1 257 aa11.17□□□□□ -0.62
SGMS1-203ENST00000429490 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.17□□□□□ -0.62
SGMS1-203ENST00000429490 HIF1ANQ9NWT6 349 aa11.17□□□□□ -0.62
SGMS1-203ENST00000429490 HLA-DRB1P01911 266 aa11.17□□□□□ -0.62
SGMS1-203ENST00000429490 RPL24P83731 157 aaKnown RBP11.17□□□□□ -0.62
SGMS1-203ENST00000429490 RIGQ13278 110 aa11.17□□□□□ -0.62
SGMS1-203ENST00000429490 C2orf83Q53S99 150 aa11.17□□□□□ -0.62
SGMS1-203ENST00000429490 C11orf52Q96A22 123 aa11.17□□□□□ -0.62
SGMS1-203ENST00000429490 LOXL4Q96JB6 756 aa11.17□□□□□ -0.62
SGMS1-203ENST00000429490 AAMDCQ9H7C9 122 aa11.17□□□□□ -0.62
SGMS1-203ENST00000429490 DCHS1Q96JQ0 3298 aa11.17□□□□□ -0.62
SGMS1-203ENST00000429490 CFAP47Q6ZTR5 3102 aa11.17□□□□□ -0.62
SGMS1-203ENST00000429490 TCRBV4S1A1TA0A5B7 111 aa11.16□□□□□ -0.62
SGMS1-203ENST00000429490 SP9P0CG40 484 aa11.16□□□□□ -0.62
SGMS1-203ENST00000429490 COMPP49747 757 aaPredicted RBP11.16□□□□□ -0.62
SGMS1-203ENST00000429490 ARF6P62330 175 aa11.16□□□□□ -0.62
SGMS1-203ENST00000429490 C1orf162Q8NEQ5 155 aaPredicted RBP11.16□□□□□ -0.62
SGMS1-203ENST00000429490 C18orf15Q96N68 181 aa11.16□□□□□ -0.62
SGMS1-203ENST00000429490 SLC25A15Q9Y619 301 aa11.16□□□□□ -0.62
SGMS1-203ENST00000429490 LY96Q9Y6Y9 160 aa11.16□□□□□ -0.62
SGMS1-203ENST00000429490 LYNX1G3V0Z9 82 aa11.16□□□□□ -0.62
SGMS1-203ENST00000429490 GNG7O60262 68 aa11.16□□□□□ -0.62
SGMS1-203ENST00000429490 LYNX1P0DP58 116 aa11.16□□□□□ -0.62
SGMS1-203ENST00000429490 CD40P25942 277 aa11.16□□□□□ -0.62
SGMS1-203ENST00000429490 MSMPQ1L6U9 139 aa11.16□□□□□ -0.62
SGMS1-203ENST00000429490 C12orf54Q6X4T0 127 aa11.16□□□□□ -0.62
SGMS1-203ENST00000429490 PRSS1P07477 247 aa11.16□□□□□ -0.62
SGMS1-203ENST00000429490 MBNL2Q5VZF2 373 aaKnown RBP11.16□□□□□ -0.62
SGMS1-203ENST00000429490 AMMECR1LQ6DCA0 310 aa11.16□□□□□ -0.62
SGMS1-203ENST00000429490 COL5A1P20908 1838 aaPredicted RBP11.16□□□□□ -0.62
SGMS1-203ENST00000429490 GAGE10A6NGK3 116 aa11.15□□□□□ -0.62
SGMS1-203ENST00000429490 C16orf97H3BN30 126 aa11.15□□□□□ -0.62
SGMS1-203ENST00000429490 M0R296 226 aa11.15□□□□□ -0.62
SGMS1-203ENST00000429490 ORM1P02763 201 aa11.15□□□□□ -0.62
SGMS1-203ENST00000429490 SCGB2A2Q13296 93 aa11.15□□□□□ -0.62
SGMS1-203ENST00000429490 ATRXP46100 2492 aa11.15□□□□□ -0.62
SGMS1-203ENST00000429490 ARL3P36405 182 aa11.15□□□□□ -0.62
SGMS1-203ENST00000429490 EBLN2Q6P2I7 272 aa11.15□□□□□ -0.62
SGMS1-203ENST00000429490 LINC00173Q6ZV60 143 aa11.15□□□□□ -0.62
SGMS1-203ENST00000429490 Q8N7P7 452 aa11.15□□□□□ -0.62
SGMS1-203ENST00000429490 TPSG1Q9NRR2 321 aa11.15□□□□□ -0.62
SGMS1-203ENST00000429490 LIPFP07098 398 aa11.15□□□□□ -0.63
SGMS1-203ENST00000429490 WT1-ASQ06250 92 aa11.15□□□□□ -0.63
SGMS1-203ENST00000429490 GFRALQ6UXV0 394 aa11.15□□□□□ -0.63
SGMS1-203ENST00000429490 FNDC4Q9H6D8 234 aaPredicted RBP11.15□□□□□ -0.63
SGMS1-203ENST00000429490 CHODLQ9H9P2 273 aa11.15□□□□□ -0.63
SGMS1-203ENST00000429490 ZNF257Q9Y2Q1 563 aa11.15□□□□□ -0.63
SGMS1-203ENST00000429490 J3KRW8 73 aa11.14□□□□□ -0.63
SGMS1-203ENST00000429490 IGHV3-23P01764 117 aa11.14□□□□□ -0.63
SGMS1-203ENST00000429490 LINC00310P59036 64 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms