RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 ANKHD1Q8IWZ3 2542 aaKnown RBP10.1□□□□□ -0.79
CDH3-202ENST00000429102 DCHS2Q6V1P9 2916 aa10.1□□□□□ -0.79
CDH3-202ENST00000429102 A0A1B0GWJ7 208 aa10.09□□□□□ -0.79
CDH3-202ENST00000429102 KIR2DS2P43631 304 aa10.09□□□□□ -0.79
CDH3-202ENST00000429102 Q0VG73 95 aa10.09□□□□□ -0.79
CDH3-202ENST00000429102 MBNL2Q5VZF2 373 aaKnown RBP10.09□□□□□ -0.79
CDH3-202ENST00000429102 TMEM116Q8NCL8 245 aa10.09□□□□□ -0.79
CDH3-202ENST00000429102 OSTCQ9NRP0 149 aa10.09□□□□□ -0.79
CDH3-202ENST00000429102 PLSCR4Q9NRQ2 329 aa10.09□□□□□ -0.79
CDH3-202ENST00000429102 TNFRSF19Q9NS68 423 aa10.09□□□□□ -0.79
CDH3-202ENST00000429102 IGLL1P15814 213 aa10.09□□□□□ -0.79
CDH3-202ENST00000429102 PRRX1P54821 245 aa10.09□□□□□ -0.79
CDH3-202ENST00000429102 WFDC3Q8IUB2 231 aa10.09□□□□□ -0.79
CDH3-202ENST00000429102 TRGV8A0A0C4DH27 118 aa10.09□□□□□ -0.79
CDH3-202ENST00000429102 IZUMO1RA6ND01 250 aa10.09□□□□□ -0.79
CDH3-202ENST00000429102 VWC2LB2RUY7 222 aa10.09□□□□□ -0.79
CDH3-202ENST00000429102 GLRXP35754 106 aa10.09□□□□□ -0.79
CDH3-202ENST00000429102 TMPRSS3P57727 454 aa10.09□□□□□ -0.79
CDH3-202ENST00000429102 Q8N976 141 aa10.09□□□□□ -0.79
CDH3-202ENST00000429102 CREBBPQ92793 2442 aa10.09□□□□□ -0.79
CDH3-202ENST00000429102 SPATA12Q7Z6I5 190 aa10.08□□□□□ -0.8
CDH3-202ENST00000429102 ZNF738Q8NE65 137 aa10.08□□□□□ -0.8
CDH3-202ENST00000429102 OR8B3Q8NGG8 313 aa10.08□□□□□ -0.8
CDH3-202ENST00000429102 C11orf52Q96A22 123 aa10.08□□□□□ -0.8
CDH3-202ENST00000429102 ASCL3Q9NQ33 180 aa10.08□□□□□ -0.8
CDH3-202ENST00000429102 RPUSD1Q9UJJ7 312 aaKnown RBP10.08□□□□□ -0.8
CDH3-202ENST00000429102 M0R296 226 aa10.08□□□□□ -0.8
CDH3-202ENST00000429102 MPV17L2Q567V2 206 aa10.08□□□□□ -0.8
CDH3-202ENST00000429102 AP1S3Q96PC3 154 aa10.08□□□□□ -0.8
CDH3-202ENST00000429102 FBLL1A6NHQ2 334 aaKnown RBP10.08□□□□□ -0.8
CDH3-202ENST00000429102 ZNF891A8MT65 544 aaPredicted RBP10.08□□□□□ -0.8
CDH3-202ENST00000429102 DLL1O00548 723 aa10.08□□□□□ -0.8
CDH3-202ENST00000429102 CCL25O15444 150 aa10.08□□□□□ -0.8
CDH3-202ENST00000429102 NDUFB8O95169 186 aa10.08□□□□□ -0.8
CDH3-202ENST00000429102 SFTPCP11686 197 aa10.08□□□□□ -0.8
CDH3-202ENST00000429102 CEACAM8P31997 349 aaPredicted RBP10.08□□□□□ -0.8
CDH3-202ENST00000429102 GOLT1AQ6ZVE7 132 aa10.08□□□□□ -0.8
CDH3-202ENST00000429102 FAM167A-AS1Q96KT0 104 aa10.08□□□□□ -0.8
CDH3-202ENST00000429102 FAM181BA6NEQ2 426 aa10.07□□□□□ -0.8
CDH3-202ENST00000429102 IGLV1-44P01699 117 aa10.07□□□□□ -0.8
CDH3-202ENST00000429102 P01737 135 aa10.07□□□□□ -0.8
CDH3-202ENST00000429102 MT-ND6P03923 174 aa10.07□□□□□ -0.8
CDH3-202ENST00000429102 COL8A1P27658 744 aa10.07□□□□□ -0.8
CDH3-202ENST00000429102 TSPOP30536 169 aa10.07□□□□□ -0.8
CDH3-202ENST00000429102 TM4SF20Q53R12 229 aa10.07□□□□□ -0.8
CDH3-202ENST00000429102 TMEM200BQ69YZ2 307 aa10.07□□□□□ -0.8
CDH3-202ENST00000429102 ZADH2Q8N4Q0 377 aa10.07□□□□□ -0.8
CDH3-202ENST00000429102 RAB37Q96AX2 223 aa10.07□□□□□ -0.8
CDH3-202ENST00000429102 ZNF714Q96N38 554 aa10.07□□□□□ -0.8
CDH3-202ENST00000429102 DYNLRB1Q9NP97 96 aa10.07□□□□□ -0.8
CDH3-202ENST00000429102 OR4C46A6NHA9 309 aa10.07□□□□□ -0.8
CDH3-202ENST00000429102 NBEAP1P0C6P0 100 aa10.07□□□□□ -0.8
CDH3-202ENST00000429102 KLF17Q5JT82 389 aaPredicted RBP10.07□□□□□ -0.8
CDH3-202ENST00000429102 ZFP30Q9Y2G7 519 aa10.07□□□□□ -0.8
CDH3-202ENST00000429102 FTH1P19P0C7X4 201 aa10.07□□□□□ -0.8
CDH3-202ENST00000429102 ZNF329Q86UD4 541 aa10.07□□□□□ -0.8
CDH3-202ENST00000429102 ADTRPQ96IZ2 230 aa10.07□□□□□ -0.8
CDH3-202ENST00000429102 ALKBH7Q9BT30 221 aaPredicted RBP10.07□□□□□ -0.8
CDH3-202ENST00000429102 OR8A1Q8NGG7 326 aa10.06□□□□□ -0.8
CDH3-202ENST00000429102 A0A1W2PRE2 83 aa10.06□□□□□ -0.8
CDH3-202ENST00000429102 LY6HO94772 140 aa10.06□□□□□ -0.8
CDH3-202ENST00000429102 CNIH1O95406 144 aa10.06□□□□□ -0.8
CDH3-202ENST00000429102 CD40P25942 277 aa10.06□□□□□ -0.8
CDH3-202ENST00000429102 BPIFB3P59826 476 aa10.06□□□□□ -0.8
CDH3-202ENST00000429102 LDLRAD2Q5SZI1 272 aa10.06□□□□□ -0.8
CDH3-202ENST00000429102 OR1L4Q8NGR5 311 aa10.06□□□□□ -0.8
CDH3-202ENST00000429102 FAM222BQ8WU58 562 aa10.06□□□□□ -0.8
CDH3-202ENST00000429102 LOXL4Q96JB6 756 aa10.06□□□□□ -0.8
CDH3-202ENST00000429102 ZNF257Q9Y2Q1 563 aa10.06□□□□□ -0.8
CDH3-202ENST00000429102 MUC6Q6W4X9 2439 aa10.06□□□□□ -0.8
CDH3-202ENST00000429102 A0A1W2PPI3 338 aa10.06□□□□□ -0.8
CDH3-202ENST00000429102 NKX6-3A6NJ46 265 aa10.06□□□□□ -0.8
CDH3-202ENST00000429102 H0YJW9 148 aa10.06□□□□□ -0.8
CDH3-202ENST00000429102 IGHV3-23P01764 117 aa10.06□□□□□ -0.8
CDH3-202ENST00000429102 IGHG3P01860 377 aa10.06□□□□□ -0.8
CDH3-202ENST00000429102 C17orf77Q96MU5 243 aa10.06□□□□□ -0.8
CDH3-202ENST00000429102 KLK10O43240 276 aa10.05□□□□□ -0.8
CDH3-202ENST00000429102 SLC25A48Q6ZT89 311 aaKnown RBP10.05□□□□□ -0.8
CDH3-202ENST00000429102 IGF2BP2-AS1Q96M15 143 aa10.05□□□□□ -0.8
CDH3-202ENST00000429102 FBXL15Q9H469 300 aa10.05□□□□□ -0.8
CDH3-202ENST00000429102 NCOR2Q9Y618 2525 aa10.05□□□□□ -0.8
CDH3-202ENST00000429102 SMIM27A0A1W2PRY6 76 aa10.05□□□□□ -0.8
CDH3-202ENST00000429102 CGB3P0DN86 165 aa10.05□□□□□ -0.8
CDH3-202ENST00000429102 CGB7P0DN87 165 aa10.05□□□□□ -0.8
CDH3-202ENST00000429102 HIST1H1EP10412 219 aaKnown RBP10.05□□□□□ -0.8
CDH3-202ENST00000429102 BTF3P20290 206 aaKnown RBP10.05□□□□□ -0.8
CDH3-202ENST00000429102 HTR1DP28221 377 aa10.05□□□□□ -0.8
CDH3-202ENST00000429102 FAM215AQ9Y5M1 114 aa10.05□□□□□ -0.8
CDH3-202ENST00000429102 TNRC6BQ9UPQ9 1833 aaKnown RBP10.05□□□□□ -0.8
CDH3-202ENST00000429102 A0A087X0K7 114 aa10.05□□□□□ -0.8
CDH3-202ENST00000429102 NDUFB3O43676 98 aa10.05□□□□□ -0.8
CDH3-202ENST00000429102 LEPROTL1O95214 131 aa10.05□□□□□ -0.8
CDH3-202ENST00000429102 C2orf83Q53S99 150 aa10.05□□□□□ -0.8
CDH3-202ENST00000429102 OR10J3Q5JRS4 329 aa10.05□□□□□ -0.8
CDH3-202ENST00000429102 IGFL4Q6B9Z1 124 aa10.05□□□□□ -0.8
CDH3-202ENST00000429102 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.05□□□□□ -0.8
CDH3-202ENST00000429102 ZNF788Q6ZQV5 615 aa10.05□□□□□ -0.8
CDH3-202ENST00000429102 SRSF12Q8WXF0 261 aaKnown RBP10.05□□□□□ -0.8
CDH3-202ENST00000429102 EPDR1Q9UM22 224 aa10.05□□□□□ -0.8
CDH3-202ENST00000429102 FAM90A9PA6NNJ1 464 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms