RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 MT-ATP8P03928 68 aa11.89□□□□□ -0.51
SYNGAP1-203ENST00000428982 PRSS29PA6NIE9 313 aa11.89□□□□□ -0.51
SYNGAP1-203ENST00000428982 HIGD1CA8MV81 97 aa11.89□□□□□ -0.51
SYNGAP1-203ENST00000428982 CGAP01215 116 aa11.89□□□□□ -0.51
SYNGAP1-203ENST00000428982 CFHR2P36980 270 aa11.89□□□□□ -0.51
SYNGAP1-203ENST00000428982 KIR2DS2P43631 304 aa11.89□□□□□ -0.51
SYNGAP1-203ENST00000428982 KLRD1Q13241 179 aa11.89□□□□□ -0.51
SYNGAP1-203ENST00000428982 ESPL1Q14674 2120 aa11.89□□□□□ -0.51
SYNGAP1-203ENST00000428982 USP34Q70CQ2 3546 aa11.88□□□□□ -0.51
SYNGAP1-203ENST00000428982 TRBV20OR9-2A0A075B6H5 130 aa11.88□□□□□ -0.51
SYNGAP1-203ENST00000428982 IGHV1-24A0A0C4DH33 117 aa11.88□□□□□ -0.51
SYNGAP1-203ENST00000428982 K7EN84 100 aa11.88□□□□□ -0.51
SYNGAP1-203ENST00000428982 AMTNQ6UX39 209 aa11.88□□□□□ -0.51
SYNGAP1-203ENST00000428982 ZNF585BQ52M93 769 aa11.88□□□□□ -0.51
SYNGAP1-203ENST00000428982 ZNF645Q8N7E2 425 aa11.88□□□□□ -0.51
SYNGAP1-203ENST00000428982 ZNF414Q96IQ9 312 aa11.88□□□□□ -0.51
SYNGAP1-203ENST00000428982 IL4P05112 153 aa11.88□□□□□ -0.51
SYNGAP1-203ENST00000428982 PPIFP30405 207 aaKnown RBP11.88□□□□□ -0.51
SYNGAP1-203ENST00000428982 SP5Q6BEB4 398 aaPredicted RBP11.88□□□□□ -0.51
SYNGAP1-203ENST00000428982 ODF3L1Q8IXM7 274 aa11.88□□□□□ -0.51
SYNGAP1-203ENST00000428982 PRELID3AQ96N28 172 aa11.88□□□□□ -0.51
SYNGAP1-203ENST00000428982 TNFRSF18Q9Y5U5 241 aa11.88□□□□□ -0.51
SYNGAP1-203ENST00000428982 APOHP02749 345 aaPredicted RBP11.87□□□□□ -0.51
SYNGAP1-203ENST00000428982 PSG7Q13046 419 aa11.87□□□□□ -0.51
SYNGAP1-203ENST00000428982 Q6ZRM9 215 aa11.87□□□□□ -0.51
SYNGAP1-203ENST00000428982 OR1L1Q8NH94 360 aa11.87□□□□□ -0.51
SYNGAP1-203ENST00000428982 ZNF502Q8TBZ5 544 aa11.87□□□□□ -0.51
SYNGAP1-203ENST00000428982 ATP5IP56385 69 aaPredicted RBP11.87□□□□□ -0.51
SYNGAP1-203ENST00000428982 MEIG1Q5JSS6 88 aa11.87□□□□□ -0.51
SYNGAP1-203ENST00000428982 TMEM14EPQ6UXP3 125 aa11.87□□□□□ -0.51
SYNGAP1-203ENST00000428982 DTX1Q86Y01 620 aa11.87□□□□□ -0.51
SYNGAP1-203ENST00000428982 IGKV3D-15A0A087WSY6 115 aa11.87□□□□□ -0.51
SYNGAP1-203ENST00000428982 NPIPB11E5RHQ5 1161 aa11.87□□□□□ -0.51
SYNGAP1-203ENST00000428982 PRSS1P07477 247 aa11.87□□□□□ -0.51
SYNGAP1-203ENST00000428982 LINC00173Q6ZV60 143 aa11.87□□□□□ -0.51
SYNGAP1-203ENST00000428982 CITED2Q99967 270 aaPredicted RBP11.87□□□□□ -0.51
SYNGAP1-203ENST00000428982 IFITM1P13164 125 aa11.87□□□□□ -0.51
SYNGAP1-203ENST00000428982 PSMB2P49721 201 aa11.87□□□□□ -0.51
SYNGAP1-203ENST00000428982 ERVK11-1P61568 191 aa11.87□□□□□ -0.51
SYNGAP1-203ENST00000428982 PGLYRP4Q96LB8 373 aa11.87□□□□□ -0.51
SYNGAP1-203ENST00000428982 M0QXV9 152 aa11.86□□□□□ -0.51
SYNGAP1-203ENST00000428982 P01737 135 aa11.86□□□□□ -0.51
SYNGAP1-203ENST00000428982 DNAJC13O75165 2243 aa11.86□□□□□ -0.51
SYNGAP1-203ENST00000428982 LYZL6O75951 148 aa11.86□□□□□ -0.51
SYNGAP1-203ENST00000428982 CXXC4Q9H2H0 198 aa11.86□□□□□ -0.51
SYNGAP1-203ENST00000428982 TMSB15BA0A087X1C1 80 aa11.86□□□□□ -0.51
SYNGAP1-203ENST00000428982 TRAV8-2A0A0B4J237 113 aa11.86□□□□□ -0.51
SYNGAP1-203ENST00000428982 K7ERJ3 54 aa11.86□□□□□ -0.51
SYNGAP1-203ENST00000428982 CLDN14O95500 239 aa11.86□□□□□ -0.51
SYNGAP1-203ENST00000428982 Q6ZUT4 128 aa11.86□□□□□ -0.51
SYNGAP1-203ENST00000428982 PINLYPA6NC86 204 aa11.85□□□□□ -0.51
SYNGAP1-203ENST00000428982 FAM90A27PA6NNH2 459 aa11.85□□□□□ -0.51
SYNGAP1-203ENST00000428982 OR2H2O95918 312 aa11.85□□□□□ -0.51
SYNGAP1-203ENST00000428982 ALKBH6Q3KRA9 238 aa11.85□□□□□ -0.51
SYNGAP1-203ENST00000428982 GGNQ86UU5 652 aa11.85□□□□□ -0.51
SYNGAP1-203ENST00000428982 ZNF488Q96MN9 340 aa11.85□□□□□ -0.51
SYNGAP1-203ENST00000428982 S1PR3Q99500 378 aa11.85□□□□□ -0.51
SYNGAP1-203ENST00000428982 LOC389332A0A1B0GUA5 103 aa11.85□□□□□ -0.51
SYNGAP1-203ENST00000428982 CACNG7P62955 275 aa11.85□□□□□ -0.51
SYNGAP1-203ENST00000428982 ZNF718Q3SXZ3 478 aa11.85□□□□□ -0.51
SYNGAP1-203ENST00000428982 ACP7Q6ZNF0 438 aa11.85□□□□□ -0.51
SYNGAP1-203ENST00000428982 DKK1O94907 266 aa11.85□□□□□ -0.51
SYNGAP1-203ENST00000428982 DRAM1Q8N682 238 aa11.85□□□□□ -0.51
SYNGAP1-203ENST00000428982 MED12LQ86YW9 2145 aa11.85□□□□□ -0.51
SYNGAP1-203ENST00000428982 OPRK1P41145 380 aa11.85□□□□□ -0.51
SYNGAP1-203ENST00000428982 ZNF138P52744 262 aa11.85□□□□□ -0.51
SYNGAP1-203ENST00000428982 UBE2L3P68036 154 aaKnown RBP11.85□□□□□ -0.51
SYNGAP1-203ENST00000428982 SPATA46Q5T0L3 261 aa11.85□□□□□ -0.51
SYNGAP1-203ENST00000428982 FAM214BQ7L5A3 538 aa11.85□□□□□ -0.51
SYNGAP1-203ENST00000428982 OSR1Q8TAX0 266 aaPredicted RBP11.85□□□□□ -0.51
SYNGAP1-203ENST00000428982 TMUB1Q9BVT8 246 aa11.85□□□□□ -0.51
SYNGAP1-203ENST00000428982 TMEM8BA6NDV4 472 aa11.84□□□□□ -0.51
SYNGAP1-203ENST00000428982 B3GALT5-AS1P59052 145 aa11.84□□□□□ -0.51
SYNGAP1-203ENST00000428982 KLF5Q13887 457 aaPredicted RBP11.84□□□□□ -0.51
SYNGAP1-203ENST00000428982 NUP35Q8NFH5 326 aa11.84□□□□□ -0.51
SYNGAP1-203ENST00000428982 ZDHHC16Q969W1 377 aa11.84□□□□□ -0.51
SYNGAP1-203ENST00000428982 LSM4Q9Y4Z0 139 aaKnown RBP11.84□□□□□ -0.51
SYNGAP1-203ENST00000428982 TEPPQ6URK8 271 aa11.84□□□□□ -0.51
SYNGAP1-203ENST00000428982 FOXI2Q6ZQN5 318 aa11.84□□□□□ -0.51
SYNGAP1-203ENST00000428982 WDR31Q8NA23 367 aa11.84□□□□□ -0.51
SYNGAP1-203ENST00000428982 OR13C6PQ8NH95 151 aa11.84□□□□□ -0.51
SYNGAP1-203ENST00000428982 NUP210LQ5VU65 1888 aa11.84□□□□□ -0.51
SYNGAP1-203ENST00000428982 ABHD17AQ96GS6 310 aa11.84□□□□□ -0.51
SYNGAP1-203ENST00000428982 PIMREGQ9BSJ6 248 aa11.84□□□□□ -0.51
SYNGAP1-203ENST00000428982 FCN3O75636 299 aa11.83□□□□□ -0.52
SYNGAP1-203ENST00000428982 RBMXL3Q8N7X1 1067 aaKnown RBP11.83□□□□□ -0.52
SYNGAP1-203ENST00000428982 LRRC29Q8WV35 223 aa11.83□□□□□ -0.52
SYNGAP1-203ENST00000428982 FOXI1Q12951 378 aa11.83□□□□□ -0.52
SYNGAP1-203ENST00000428982 KRTAP27-1Q3LI81 207 aa11.83□□□□□ -0.52
SYNGAP1-203ENST00000428982 MDS2Q8NDY4 140 aa11.83□□□□□ -0.52
SYNGAP1-203ENST00000428982 SIGLEC8Q9NYZ4 499 aa11.83□□□□□ -0.52
SYNGAP1-203ENST00000428982 BDP1A6H8Y1 2624 aa11.83□□□□□ -0.52
SYNGAP1-203ENST00000428982 DIDO1Q9BTC0 2240 aaKnown RBP11.83□□□□□ -0.52
SYNGAP1-203ENST00000428982 FABP5P3A8MUU1 101 aa11.83□□□□□ -0.52
SYNGAP1-203ENST00000428982 PPDPFLQ8WWR9 84 aa11.83□□□□□ -0.52
SYNGAP1-203ENST00000428982 WDR83OSQ9Y284 106 aa11.83□□□□□ -0.52
SYNGAP1-203ENST00000428982 M0R1B8 84 aa11.82□□□□□ -0.52
SYNGAP1-203ENST00000428982 SLC35E4Q6ICL7 350 aa11.82□□□□□ -0.52
SYNGAP1-203ENST00000428982 GCSAMQ8N6F7 178 aa11.82□□□□□ -0.52
SYNGAP1-203ENST00000428982 MSRB2Q9Y3D2 182 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms