RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 FOXL1Q12952 345 aa12.27□□□□□ -0.45
SHOX2-202ENST00000425436 C5orf64Q2M2E5 130 aa12.27□□□□□ -0.45
SHOX2-202ENST00000425436 ZNF562Q6V9R5 426 aa12.27□□□□□ -0.45
SHOX2-202ENST00000425436 IQCF2Q8IXL9 164 aa12.27□□□□□ -0.45
SHOX2-202ENST00000425436 OR1L4Q8NGR5 311 aa12.27□□□□□ -0.45
SHOX2-202ENST00000425436 OR2T6Q8NHC8 308 aa12.27□□□□□ -0.45
SHOX2-202ENST00000425436 ACY3Q96HD9 319 aa12.27□□□□□ -0.45
SHOX2-202ENST00000425436 PFDN5Q99471 154 aa12.27□□□□□ -0.45
SHOX2-202ENST00000425436 MRPL32Q9BYC8 188 aaKnown RBP12.27□□□□□ -0.45
SHOX2-202ENST00000425436 TECRQ9NZ01 308 aaKnown RBP12.27□□□□□ -0.45
SHOX2-202ENST00000425436 FUT9Q9Y231 359 aa12.27□□□□□ -0.45
SHOX2-202ENST00000425436 ARL2-SNX15V9GYD0 113 aa12.27□□□□□ -0.45
SHOX2-202ENST00000425436 A0A087WWC5 75 aa12.26□□□□□ -0.45
SHOX2-202ENST00000425436 TCRBV4S1A1TA0A5B7 111 aa12.26□□□□□ -0.45
SHOX2-202ENST00000425436 CLPSL1A2RUU4 121 aa12.26□□□□□ -0.45
SHOX2-202ENST00000425436 HMGB3O15347 200 aaKnown RBP12.26□□□□□ -0.45
SHOX2-202ENST00000425436 CD81P60033 236 aa12.26□□□□□ -0.45
SHOX2-202ENST00000425436 KRTAP21-3Q3LHN1 58 aa12.26□□□□□ -0.45
SHOX2-202ENST00000425436 GCSAMLQ5JQS6 135 aa12.26□□□□□ -0.45
SHOX2-202ENST00000425436 FAM90A2PQ658T7 463 aa12.26□□□□□ -0.45
SHOX2-202ENST00000425436 Q8N2B8 174 aa12.26□□□□□ -0.45
SHOX2-202ENST00000425436 C15orf54Q8N8G6 183 aa12.26□□□□□ -0.45
SHOX2-202ENST00000425436 TMEM116Q8NCL8 245 aa12.26□□□□□ -0.45
SHOX2-202ENST00000425436 ABHD5Q8WTS1 349 aa12.26□□□□□ -0.45
SHOX2-202ENST00000425436 NPIPB3Q92617 1050 aa12.26□□□□□ -0.45
SHOX2-202ENST00000425436 HSPB9Q9BQS6 159 aa12.26□□□□□ -0.45
SHOX2-202ENST00000425436 TMPRSS5Q9H3S3 457 aa12.26□□□□□ -0.45
SHOX2-202ENST00000425436 RNF114Q9Y508 228 aa12.26□□□□□ -0.45
SHOX2-202ENST00000425436 TET2Q6N021 2002 aaPredicted RBP12.25□□□□□ -0.45
SHOX2-202ENST00000425436 F6UZH7 168 aa12.25□□□□□ -0.45
SHOX2-202ENST00000425436 NUPL2O15504 423 aaKnown RBP12.25□□□□□ -0.45
SHOX2-202ENST00000425436 PAGE4O60829 102 aa12.25□□□□□ -0.45
SHOX2-202ENST00000425436 AREGP15514 252 aa12.25□□□□□ -0.45
SHOX2-202ENST00000425436 FXYD3Q14802 87 aa12.25□□□□□ -0.45
SHOX2-202ENST00000425436 MLANAQ16655 118 aa12.25□□□□□ -0.45
SHOX2-202ENST00000425436 TMEM88Q6PEY1 159 aa12.25□□□□□ -0.45
SHOX2-202ENST00000425436 PQLC2Q6ZP29 291 aa12.25□□□□□ -0.45
SHOX2-202ENST00000425436 MISP3Q96FF7 219 aa12.25□□□□□ -0.45
SHOX2-202ENST00000425436 TRGV9Q99603 122 aa12.25□□□□□ -0.45
SHOX2-202ENST00000425436 FNDC4Q9H6D8 234 aaPredicted RBP12.25□□□□□ -0.45
SHOX2-202ENST00000425436 DNAJC4Q9NNZ3 241 aa12.25□□□□□ -0.45
SHOX2-202ENST00000425436 TMEM167BQ9NRX6 74 aa12.25□□□□□ -0.45
SHOX2-202ENST00000425436 SERTAD4Q9NUC0 356 aa12.25□□□□□ -0.45
SHOX2-202ENST00000425436 LINC00527Q9UJ94 153 aa12.25□□□□□ -0.45
SHOX2-202ENST00000425436 IGKV1OR2-108A0A075B7D4 117 aa12.24□□□□□ -0.45
SHOX2-202ENST00000425436 ELOA3CA0A087WX78 387 aaPredicted RBP12.24□□□□□ -0.45
SHOX2-202ENST00000425436 OR5G3P0C626 314 aa12.24□□□□□ -0.45
SHOX2-202ENST00000425436 FAM78BQ5VT40 261 aa12.24□□□□□ -0.45
SHOX2-202ENST00000425436 OR4F4Q96R69 305 aa12.24□□□□□ -0.45
SHOX2-202ENST00000425436 SEPSECSQ9HD40 501 aaKnown RBP12.24□□□□□ -0.45
SHOX2-202ENST00000425436 CXorf65A6NEN9 183 aa12.23□□□□□ -0.45
SHOX2-202ENST00000425436 ZNF727A8MUV8 499 aa12.23□□□□□ -0.45
SHOX2-202ENST00000425436 C11orf94C9JXX5 98 aa12.23□□□□□ -0.45
SHOX2-202ENST00000425436 REG1AP05451 166 aa12.23□□□□□ -0.45
SHOX2-202ENST00000425436 FABP1P07148 127 aa12.23□□□□□ -0.45
SHOX2-202ENST00000425436 ARL14EPLP0DKL9 152 aa12.23□□□□□ -0.45
SHOX2-202ENST00000425436 DEFA4P12838 97 aa12.23□□□□□ -0.45
SHOX2-202ENST00000425436 GCHFRP30047 84 aa12.23□□□□□ -0.45
SHOX2-202ENST00000425436 CBLN2Q8IUK8 224 aa12.23□□□□□ -0.45
SHOX2-202ENST00000425436 NOL4LQ96MY1 436 aaPredicted RBP12.23□□□□□ -0.45
SHOX2-202ENST00000425436 NAT8Q9UHE5 227 aa12.23□□□□□ -0.45
SHOX2-202ENST00000425436 STAB1Q9NY15 2570 aa12.23□□□□□ -0.45
SHOX2-202ENST00000425436 IGHV7-81A0A0B4J1V7 117 aa12.22□□□□□ -0.45
SHOX2-202ENST00000425436 IGHG2P01859 326 aa12.22□□□□□ -0.45
SHOX2-202ENST00000425436 CTRB1P17538 263 aa12.22□□□□□ -0.45
SHOX2-202ENST00000425436 RND2P52198 227 aa12.22□□□□□ -0.45
SHOX2-202ENST00000425436 PROK1P58294 105 aa12.22□□□□□ -0.45
SHOX2-202ENST00000425436 TMEM241Q24JQ0 296 aa12.22□□□□□ -0.45
SHOX2-202ENST00000425436 AKIRIN2Q53H80 203 aa12.22□□□□□ -0.45
SHOX2-202ENST00000425436 CTRB2Q6GPI1 263 aa12.22□□□□□ -0.45
SHOX2-202ENST00000425436 C12orf54Q6X4T0 127 aa12.22□□□□□ -0.45
SHOX2-202ENST00000425436 WNT10AQ9GZT5 417 aa12.22□□□□□ -0.45
SHOX2-202ENST00000425436 TMEM242Q9NWH2 141 aa12.22□□□□□ -0.45
SHOX2-202ENST00000425436 NPIPB5A8MRT5 1133 aa12.21□□□□□ -0.45
SHOX2-202ENST00000425436 HLA-DRB1P01911 266 aa12.21□□□□□ -0.45
SHOX2-202ENST00000425436 C8orf88P0DMB2 117 aa12.21□□□□□ -0.45
SHOX2-202ENST00000425436 KRTAP10-3P60369 221 aa12.21□□□□□ -0.45
SHOX2-202ENST00000425436 SSBP2P81877 361 aaPredicted RBP12.21□□□□□ -0.45
SHOX2-202ENST00000425436 HIST2H2BDQ6DRA6 164 aa12.21□□□□□ -0.45
SHOX2-202ENST00000425436 OR4X1Q8NH49 305 aa12.21□□□□□ -0.45
SHOX2-202ENST00000425436 SMIM7Q9BQ49 75 aa12.21□□□□□ -0.45
SHOX2-202ENST00000425436 SDF2L1Q9HCN8 221 aa12.21□□□□□ -0.45
SHOX2-202ENST00000425436 TNCP24821 2201 aa12.21□□□□□ -0.46
SHOX2-202ENST00000425436 A0A1B0GUS0 222 aa12.21□□□□□ -0.46
SHOX2-202ENST00000425436 COX7A2P2O60397 106 aa12.21□□□□□ -0.46
SHOX2-202ENST00000425436 MFAP2P55001 183 aa12.21□□□□□ -0.46
SHOX2-202ENST00000425436 CX3CL1P78423 397 aa12.21□□□□□ -0.46
SHOX2-202ENST00000425436 CST9LP1Q5W188 147 aa12.21□□□□□ -0.46
SHOX2-202ENST00000425436 KLHDC1Q8N7A1 406 aa12.21□□□□□ -0.46
SHOX2-202ENST00000425436 STXBP6Q8NFX7 210 aa12.21□□□□□ -0.46
SHOX2-202ENST00000425436 ARPC1AQ92747 370 aa12.21□□□□□ -0.46
SHOX2-202ENST00000425436 UHRF2Q96PU4 802 aa12.21□□□□□ -0.46
SHOX2-202ENST00000425436 C20orf24Q9BUV8 137 aa12.21□□□□□ -0.46
SHOX2-202ENST00000425436 CTDSP1Q9GZU7 261 aa12.21□□□□□ -0.46
SHOX2-202ENST00000425436 THYN1Q9P016 225 aa12.21□□□□□ -0.46
SHOX2-202ENST00000425436 IGKV1D-37A0A075B6S9 117 aa12.2□□□□□ -0.46
SHOX2-202ENST00000425436 EIF3GO75821 320 aaKnown RBP eCLIP12.2□□□□□ -0.46
SHOX2-202ENST00000425436 MT-ND4LP03901 98 aa12.2□□□□□ -0.46
SHOX2-202ENST00000425436 NDPQ00604 133 aa12.2□□□□□ -0.46
SHOX2-202ENST00000425436 RNF212Q495C1 297 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms