RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 NKX2-1P43699 371 aaPredicted RBP9.58□□□□□ -0.88
VRK3-203ENST00000424804 POLR2GP62487 172 aaKnown RBP eCLIP9.58□□□□□ -0.88
VRK3-203ENST00000424804 RPP30P78346 268 aaKnown RBP9.58□□□□□ -0.88
VRK3-203ENST00000424804 IAH1Q2TAA2 248 aaPredicted RBP9.58□□□□□ -0.88
VRK3-203ENST00000424804 ENKURQ8TC29 256 aa9.58□□□□□ -0.88
VRK3-203ENST00000424804 TMEM231Q9H6L2 316 aa9.58□□□□□ -0.88
VRK3-203ENST00000424804 BATF3Q9NR55 127 aa9.58□□□□□ -0.88
VRK3-203ENST00000424804 TBC1D24Q9ULP9 559 aa9.58□□□□□ -0.88
VRK3-203ENST00000424804 TP53TG1Q9Y2A0 90 aa9.58□□□□□ -0.88
VRK3-203ENST00000424804 HECTD4Q9Y4D8 3996 aa9.57□□□□□ -0.88
VRK3-203ENST00000424804 A0A0J9YWU9 116 aa9.57□□□□□ -0.88
VRK3-203ENST00000424804 DNASE2O00115 360 aaPredicted RBP9.57□□□□□ -0.88
VRK3-203ENST00000424804 DFFBO76075 338 aa9.57□□□□□ -0.88
VRK3-203ENST00000424804 PAFAH1B2P68402 229 aa9.57□□□□□ -0.88
VRK3-203ENST00000424804 Q6ZWC4 215 aa9.57□□□□□ -0.88
VRK3-203ENST00000424804 PBDC1Q9BVG4 233 aa9.57□□□□□ -0.88
VRK3-203ENST00000424804 PSENENQ9NZ42 101 aa9.57□□□□□ -0.88
VRK3-203ENST00000424804 RABAC1Q9UI14 185 aa9.57□□□□□ -0.88
VRK3-203ENST00000424804 STRAPQ9Y3F4 350 aaKnown RBP9.57□□□□□ -0.88
VRK3-203ENST00000424804 A0A1W2PS18 150 aa9.56□□□□□ -0.88
VRK3-203ENST00000424804 SMCO3A2RU48 225 aa9.56□□□□□ -0.88
VRK3-203ENST00000424804 C5orf51A6NDU8 294 aa9.56□□□□□ -0.88
VRK3-203ENST00000424804 UPK1BO75841 260 aa9.56□□□□□ -0.88
VRK3-203ENST00000424804 RD3LP0DJH9 198 aa9.56□□□□□ -0.88
VRK3-203ENST00000424804 ATP5IP56385 69 aaPredicted RBP9.56□□□□□ -0.88
VRK3-203ENST00000424804 GAMTQ14353 236 aa9.56□□□□□ -0.88
VRK3-203ENST00000424804 OR8G2PQ6IF36 304 aa9.56□□□□□ -0.88
VRK3-203ENST00000424804 LILRB2Q8N423 598 aa9.56□□□□□ -0.88
VRK3-203ENST00000424804 ZBTB8BQ8NAP8 495 aaPredicted RBP9.56□□□□□ -0.88
VRK3-203ENST00000424804 STXBP6Q8NFX7 210 aa9.56□□□□□ -0.88
VRK3-203ENST00000424804 OR4D5Q8NGN0 318 aa9.56□□□□□ -0.88
VRK3-203ENST00000424804 ZNF431Q8TF32 576 aaPredicted RBP9.56□□□□□ -0.88
VRK3-203ENST00000424804 MITD1Q8WV92 249 aa9.56□□□□□ -0.88
VRK3-203ENST00000424804 RNF183Q96D59 192 aa9.56□□□□□ -0.88
VRK3-203ENST00000424804 GRAMD2BQ96HH9 432 aa9.56□□□□□ -0.88
VRK3-203ENST00000424804 SPRY2O43597 315 aa9.55□□□□□ -0.88
VRK3-203ENST00000424804 TOMM40O96008 361 aa9.55□□□□□ -0.88
VRK3-203ENST00000424804 HNRNPCP07910 306 aaKnown RBP eCLIP9.55□□□□□ -0.88
VRK3-203ENST00000424804 PSG1P11464 419 aa9.55□□□□□ -0.88
VRK3-203ENST00000424804 RPL35AP18077 110 aaKnown RBP9.55□□□□□ -0.88
VRK3-203ENST00000424804 GPX4P36969 197 aaPredicted RBP9.55□□□□□ -0.88
VRK3-203ENST00000424804 P2RY1P47900 373 aa9.55□□□□□ -0.88
VRK3-203ENST00000424804 YPEL3P61236 119 aaPredicted RBP9.55□□□□□ -0.88
VRK3-203ENST00000424804 AKR1C1Q04828 323 aa9.55□□□□□ -0.88
VRK3-203ENST00000424804 ASAH1Q13510 395 aa9.55□□□□□ -0.88
VRK3-203ENST00000424804 OR2F1Q13607 317 aa9.55□□□□□ -0.88
VRK3-203ENST00000424804 USF2Q15853 346 aaPredicted RBP9.55□□□□□ -0.88
VRK3-203ENST00000424804 CEMP1Q6PRD7 247 aaPredicted RBP9.55□□□□□ -0.88
VRK3-203ENST00000424804 APRG1Q8IVJ8 170 aa9.55□□□□□ -0.88
VRK3-203ENST00000424804 C12orf45Q8N5I9 185 aaPredicted RBP9.55□□□□□ -0.88
VRK3-203ENST00000424804 OR51G1Q8NGK1 321 aa9.55□□□□□ -0.88
VRK3-203ENST00000424804 VSIRQ9H7M9 311 aa9.55□□□□□ -0.88
VRK3-203ENST00000424804 KIR2DL5BA0A0G2JN68 375 aa9.54□□□□□ -0.88
VRK3-203ENST00000424804 KIR2DL5BA0A0G2JPC4 375 aa9.54□□□□□ -0.88
VRK3-203ENST00000424804 ATF4P18848 351 aaPredicted RBP9.54□□□□□ -0.88
VRK3-203ENST00000424804 LYZP61626 148 aa9.54□□□□□ -0.88
VRK3-203ENST00000424804 ID3Q02535 119 aa9.54□□□□□ -0.88
VRK3-203ENST00000424804 ZNF90Q03938 601 aa9.54□□□□□ -0.88
VRK3-203ENST00000424804 ZNF124Q15973 351 aa9.54□□□□□ -0.88
VRK3-203ENST00000424804 DEFB135Q30KP9 77 aa9.54□□□□□ -0.88
VRK3-203ENST00000424804 FAM90A2PQ658T7 463 aa9.54□□□□□ -0.88
VRK3-203ENST00000424804 KIR2DL5AQ8N109 375 aa9.54□□□□□ -0.88
VRK3-203ENST00000424804 KIR2DL5BQ8NHK3 375 aa9.54□□□□□ -0.88
VRK3-203ENST00000424804 PPP1R14BQ96C90 147 aa9.54□□□□□ -0.88
VRK3-203ENST00000424804 MS4A6AQ9H2W1 248 aa9.54□□□□□ -0.88
VRK3-203ENST00000424804 MAP6D1Q9H9H5 199 aa9.54□□□□□ -0.88
VRK3-203ENST00000424804 RCL1Q9Y2P8 373 aaKnown RBP9.54□□□□□ -0.88
VRK3-203ENST00000424804 LSM5Q9Y4Y9 91 aaKnown RBP9.54□□□□□ -0.88
VRK3-203ENST00000424804 DNAH17Q9UFH2 4485 aa9.53□□□□□ -0.88
VRK3-203ENST00000424804 L7N2F9 121 aa9.53□□□□□ -0.88
VRK3-203ENST00000424804 UBE2CO00762 179 aa9.53□□□□□ -0.88
VRK3-203ENST00000424804 CD5P06127 495 aa9.53□□□□□ -0.88
VRK3-203ENST00000424804 FABP1P07148 127 aa9.53□□□□□ -0.88
VRK3-203ENST00000424804 METTL15P1P0C7V9 234 aa9.53□□□□□ -0.88
VRK3-203ENST00000424804 CRYBB3P26998 211 aa9.53□□□□□ -0.88
VRK3-203ENST00000424804 RRAS2P62070 204 aaPredicted RBP9.53□□□□□ -0.88
VRK3-203ENST00000424804 VAMP2P63027 116 aa9.53□□□□□ -0.88
VRK3-203ENST00000424804 PMS2P11Q13670 270 aa9.53□□□□□ -0.88
VRK3-203ENST00000424804 ACOT7LQ6ZUV0 252 aa9.53□□□□□ -0.88
VRK3-203ENST00000424804 RNF125Q96EQ8 232 aa9.53□□□□□ -0.88
VRK3-203ENST00000424804 IGKV1D-37A0A075B6S9 117 aa9.52□□□□□ -0.89
VRK3-203ENST00000424804 CCNKO75909 580 aa9.52□□□□□ -0.89
VRK3-203ENST00000424804 LY6G6CO95867 125 aa9.52□□□□□ -0.89
VRK3-203ENST00000424804 MBPP02686 304 aaPredicted RBP9.52□□□□□ -0.89
VRK3-203ENST00000424804 EIF2B2P49770 351 aaKnown RBP9.52□□□□□ -0.89
VRK3-203ENST00000424804 BCAP31P51572 246 aa9.52□□□□□ -0.89
VRK3-203ENST00000424804 APOC4P55056 127 aa9.52□□□□□ -0.89
VRK3-203ENST00000424804 S100A10P60903 97 aa9.52□□□□□ -0.89
VRK3-203ENST00000424804 IFITM3Q01628 133 aa9.52□□□□□ -0.89
VRK3-203ENST00000424804 LEMD1Q68G75 181 aa9.52□□□□□ -0.89
VRK3-203ENST00000424804 KRTAP17-1Q9BYP8 105 aa9.52□□□□□ -0.89
VRK3-203ENST00000424804 CXorf65A6NEN9 183 aa9.51□□□□□ -0.89
VRK3-203ENST00000424804 HELTA6NFD8 242 aa9.51□□□□□ -0.89
VRK3-203ENST00000424804 CMC4P56277 68 aaPredicted RBP9.51□□□□□ -0.89
VRK3-203ENST00000424804 DEFA1P59665 94 aa9.51□□□□□ -0.89
VRK3-203ENST00000424804 DEFA3P59666 94 aa9.51□□□□□ -0.89
VRK3-203ENST00000424804 DEFB131AP59861 70 aa9.51□□□□□ -0.89
VRK3-203ENST00000424804 GSG1LQ6UXU4 331 aa9.51□□□□□ -0.89
VRK3-203ENST00000424804 NRARPQ7Z6K4 114 aa9.51□□□□□ -0.89
VRK3-203ENST00000424804 FAM24BQ8N5W8 94 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms