RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 IL4P05112 153 aa10.32□□□□□ -0.76
PRPF39-202ENST00000424478 LINC00869P0C866 280 aa10.32□□□□□ -0.76
PRPF39-202ENST00000424478 ZNF616Q08AN1 781 aa10.32□□□□□ -0.76
PRPF39-202ENST00000424478 MORN5Q5VZ52 161 aa10.32□□□□□ -0.76
PRPF39-202ENST00000424478 OR2G3Q8NGZ4 309 aa10.32□□□□□ -0.76
PRPF39-202ENST00000424478 GGACTQ9BVM4 153 aa10.32□□□□□ -0.76
PRPF39-202ENST00000424478 RD3LP0DJH9 198 aa10.32□□□□□ -0.76
PRPF39-202ENST00000424478 PRB4P10163 310 aaPredicted RBP10.32□□□□□ -0.76
PRPF39-202ENST00000424478 SYNJ2BPP57105 145 aa10.32□□□□□ -0.76
PRPF39-202ENST00000424478 RAB2AP61019 212 aa10.32□□□□□ -0.76
PRPF39-202ENST00000424478 USF2Q15853 346 aaPredicted RBP10.32□□□□□ -0.76
PRPF39-202ENST00000424478 KLK9Q2XQG4 91 aa10.32□□□□□ -0.76
PRPF39-202ENST00000424478 FFAR4Q5NUL3 377 aa10.32□□□□□ -0.76
PRPF39-202ENST00000424478 BAP18Q8IXM2 172 aa10.32□□□□□ -0.76
PRPF39-202ENST00000424478 THAP8Q8NA92 274 aa10.32□□□□□ -0.76
PRPF39-202ENST00000424478 OR1B1Q8NGR6 318 aa10.32□□□□□ -0.76
PRPF39-202ENST00000424478 KLK9Q9UKQ9 250 aa10.32□□□□□ -0.76
PRPF39-202ENST00000424478 SLC45A2Q9UMX9 530 aa10.32□□□□□ -0.76
PRPF39-202ENST00000424478 TAAR5O14804 337 aa10.31□□□□□ -0.76
PRPF39-202ENST00000424478 CDX1P47902 265 aaPredicted RBP10.31□□□□□ -0.76
PRPF39-202ENST00000424478 B2MP61769 119 aa10.31□□□□□ -0.76
PRPF39-202ENST00000424478 SPATA31B1PQ5VZV4 182 aa10.31□□□□□ -0.76
PRPF39-202ENST00000424478 APOHP02749 345 aaPredicted RBP10.31□□□□□ -0.76
PRPF39-202ENST00000424478 HOXD3P31249 432 aaPredicted RBP10.31□□□□□ -0.76
PRPF39-202ENST00000424478 TOMM20LQ6UXN7 152 aa10.31□□□□□ -0.76
PRPF39-202ENST00000424478 SLC51BQ86UW2 128 aa10.31□□□□□ -0.76
PRPF39-202ENST00000424478 ZNF709Q8N972 641 aa10.31□□□□□ -0.76
PRPF39-202ENST00000424478 TSSC4Q9Y5U2 329 aaPredicted RBP10.31□□□□□ -0.76
PRPF39-202ENST00000424478 TEX46H3BTG2 121 aa10.3□□□□□ -0.76
PRPF39-202ENST00000424478 OR5G3P0C626 314 aa10.3□□□□□ -0.76
PRPF39-202ENST00000424478 TPT1P13693 172 aaKnown RBP10.3□□□□□ -0.76
PRPF39-202ENST00000424478 IFITM2Q01629 132 aa10.3□□□□□ -0.76
PRPF39-202ENST00000424478 RPEL1Q2QD12 228 aa10.3□□□□□ -0.76
PRPF39-202ENST00000424478 TM4SF20Q53R12 229 aa10.3□□□□□ -0.76
PRPF39-202ENST00000424478 SSX7Q7RTT5 188 aa10.3□□□□□ -0.76
PRPF39-202ENST00000424478 COMMD1Q8N668 190 aa10.3□□□□□ -0.76
PRPF39-202ENST00000424478 GINS3Q9BRX5 216 aa10.3□□□□□ -0.76
PRPF39-202ENST00000424478 SORL1Q92673 2214 aa10.3□□□□□ -0.76
PRPF39-202ENST00000424478 PATE2Q6UY27 113 aa10.3□□□□□ -0.76
PRPF39-202ENST00000424478 OR1N2Q8NGR9 330 aa10.3□□□□□ -0.76
PRPF39-202ENST00000424478 C4orf3Q8WVX3 66 aa10.3□□□□□ -0.76
PRPF39-202ENST00000424478 TMEM37Q8WXS4 190 aa10.3□□□□□ -0.76
PRPF39-202ENST00000424478 SLC39A9Q9NUM3 307 aa10.3□□□□□ -0.76
PRPF39-202ENST00000424478 TRAV5A0A0B4J249 113 aa10.29□□□□□ -0.76
PRPF39-202ENST00000424478 BRI3O95415 125 aa10.29□□□□□ -0.76
PRPF39-202ENST00000424478 C3orf56Q8N813 242 aa10.29□□□□□ -0.76
PRPF39-202ENST00000424478 PPP1R14BQ96C90 147 aa10.29□□□□□ -0.76
PRPF39-202ENST00000424478 TRGV9Q99603 122 aa10.29□□□□□ -0.76
PRPF39-202ENST00000424478 SEPSECSQ9HD40 501 aaKnown RBP10.29□□□□□ -0.76
PRPF39-202ENST00000424478 PRR20EP86478 221 aa10.29□□□□□ -0.76
PRPF39-202ENST00000424478 PRR20CP86479 221 aa10.29□□□□□ -0.76
PRPF39-202ENST00000424478 PRR20DP86480 221 aa10.29□□□□□ -0.76
PRPF39-202ENST00000424478 PRR20BP86481 221 aa10.29□□□□□ -0.76
PRPF39-202ENST00000424478 PRR20AP86496 221 aa10.29□□□□□ -0.76
PRPF39-202ENST00000424478 DPF1Q92782 380 aa10.29□□□□□ -0.76
PRPF39-202ENST00000424478 DLX4Q92988 240 aaPredicted RBP10.29□□□□□ -0.76
PRPF39-202ENST00000424478 SPP1P10451 314 aa10.28□□□□□ -0.76
PRPF39-202ENST00000424478 ARV1Q9H2C2 271 aa10.28□□□□□ -0.76
PRPF39-202ENST00000424478 SLC25A22Q9H936 323 aa10.28□□□□□ -0.76
PRPF39-202ENST00000424478 CCL24O00175 119 aa10.28□□□□□ -0.76
PRPF39-202ENST00000424478 GGCTO75223 188 aaKnown RBP10.28□□□□□ -0.76
PRPF39-202ENST00000424478 HSPB1P04792 205 aaKnown RBP10.28□□□□□ -0.76
PRPF39-202ENST00000424478 FAM122CQ6P4D5 195 aa10.28□□□□□ -0.76
PRPF39-202ENST00000424478 TMEM158Q8WZ71 300 aa10.28□□□□□ -0.76
PRPF39-202ENST00000424478 RNF125Q96EQ8 232 aa10.28□□□□□ -0.76
PRPF39-202ENST00000424478 ZFAND3Q9H8U3 227 aa10.28□□□□□ -0.76
PRPF39-202ENST00000424478 RPRMQ9NS64 109 aa10.28□□□□□ -0.76
PRPF39-202ENST00000424478 FNDC10F2Z333 226 aa10.28□□□□□ -0.76
PRPF39-202ENST00000424478 RAB31Q13636 194 aa10.28□□□□□ -0.76
PRPF39-202ENST00000424478 STOML3Q8TAV4 291 aa10.28□□□□□ -0.76
PRPF39-202ENST00000424478 CITED1Q99966 193 aa10.28□□□□□ -0.76
PRPF39-202ENST00000424478 IGKV3-7A0A075B6H7 116 aa10.27□□□□□ -0.77
PRPF39-202ENST00000424478 H3BTX0 84 aa10.27□□□□□ -0.77
PRPF39-202ENST00000424478 TSPAN15O95858 294 aa10.27□□□□□ -0.77
PRPF39-202ENST00000424478 TOMM40O96008 361 aa10.27□□□□□ -0.77
PRPF39-202ENST00000424478 TEX261Q6UWH6 196 aa10.27□□□□□ -0.77
PRPF39-202ENST00000424478 C12orf54Q6X4T0 127 aa10.27□□□□□ -0.77
PRPF39-202ENST00000424478 Q8WTZ3 238 aa10.27□□□□□ -0.77
PRPF39-202ENST00000424478 TXN2Q99757 166 aa10.27□□□□□ -0.77
PRPF39-202ENST00000424478 SCRT1Q9BWW7 348 aa10.27□□□□□ -0.77
PRPF39-202ENST00000424478 ANK2Q01484 3957 aa10.27□□□□□ -0.77
PRPF39-202ENST00000424478 ZNF600Q6ZNG1 722 aa10.27□□□□□ -0.77
PRPF39-202ENST00000424478 RPP25LQ8N5L8 163 aaKnown RBP10.27□□□□□ -0.77
PRPF39-202ENST00000424478 A0A1B0GUS0 222 aa10.26□□□□□ -0.77
PRPF39-202ENST00000424478 LINC01619G3V211 115 aa10.26□□□□□ -0.77
PRPF39-202ENST00000424478 FCGR2BP31994 310 aaPredicted RBP10.26□□□□□ -0.77
PRPF39-202ENST00000424478 RPL29P47914 159 aaKnown RBP10.26□□□□□ -0.77
PRPF39-202ENST00000424478 FGF8P55075 233 aaPredicted RBP10.26□□□□□ -0.77
PRPF39-202ENST00000424478 FAM78BQ5VT40 261 aa10.26□□□□□ -0.77
PRPF39-202ENST00000424478 MIR17HGQ75NE6 70 aa10.26□□□□□ -0.77
PRPF39-202ENST00000424478 ZNF680Q8NEM1 530 aa10.26□□□□□ -0.77
PRPF39-202ENST00000424478 FAM213BQ8TBF2 198 aa10.26□□□□□ -0.77
PRPF39-202ENST00000424478 C17orf112F2Z3M2 114 aa10.26□□□□□ -0.77
PRPF39-202ENST00000424478 COX7A2P2O60397 106 aa10.26□□□□□ -0.77
PRPF39-202ENST00000424478 ZNF726P1Q15940 193 aa10.26□□□□□ -0.77
PRPF39-202ENST00000424478 NOTCH1P46531 2555 aa10.26□□□□□ -0.77
PRPF39-202ENST00000424478 DNHD1Q96M86 4753 aa10.26□□□□□ -0.77
PRPF39-202ENST00000424478 TRAV30A0A087WSZ9 112 aa10.26□□□□□ -0.77
PRPF39-202ENST00000424478 MPDU1O75352 247 aa10.26□□□□□ -0.77
PRPF39-202ENST00000424478 YPEL3P61236 119 aaPredicted RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms