RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 IGF2-ASQ6U949 168 aa12.68□□□□□ -0.38
CDH1-202ENST00000422392 SPACA3Q8IXA5 215 aa12.68□□□□□ -0.38
CDH1-202ENST00000422392 TNFRSF19Q9NS68 423 aa12.68□□□□□ -0.38
CDH1-202ENST00000422392 PTPRZ1P23471 2315 aaPredicted RBP12.68□□□□□ -0.38
CDH1-202ENST00000422392 TLN1Q9Y490 2541 aaKnown RBP12.68□□□□□ -0.38
CDH1-202ENST00000422392 HIGD1CA8MV81 97 aa12.68□□□□□ -0.38
CDH1-202ENST00000422392 SLC25A5P05141 298 aaKnown RBP12.68□□□□□ -0.38
CDH1-202ENST00000422392 PRB4P10163 310 aaPredicted RBP12.68□□□□□ -0.38
CDH1-202ENST00000422392 CYB5R2Q6BCY4 276 aa12.68□□□□□ -0.38
CDH1-202ENST00000422392 THAP8Q8NA92 274 aa12.68□□□□□ -0.38
CDH1-202ENST00000422392 PGPA6NDG6 321 aa12.67□□□□□ -0.38
CDH1-202ENST00000422392 INS-IGF2F8WCM5 200 aa12.67□□□□□ -0.38
CDH1-202ENST00000422392 CD24P25063 80 aa12.67□□□□□ -0.38
CDH1-202ENST00000422392 SPATA45Q537H7 98 aa12.67□□□□□ -0.38
CDH1-202ENST00000422392 IGLC7A0M8Q6 106 aa12.67□□□□□ -0.38
CDH1-202ENST00000422392 UBE2G1P62253 170 aa12.67□□□□□ -0.38
CDH1-202ENST00000422392 TNXAQ16473 311 aa12.67□□□□□ -0.38
CDH1-202ENST00000422392 MAJINQ3KP22 176 aa12.67□□□□□ -0.38
CDH1-202ENST00000422392 VMA21Q3ZAQ7 101 aa12.67□□□□□ -0.38
CDH1-202ENST00000422392 LCN12Q6JVE5 192 aa12.67□□□□□ -0.38
CDH1-202ENST00000422392 LINC00322Q6ZN03 302 aaPredicted RBP12.67□□□□□ -0.38
CDH1-202ENST00000422392 TNFRSF13BO14836 293 aaPredicted RBP12.66□□□□□ -0.38
CDH1-202ENST00000422392 IGHV1-8P0DP01 117 aa12.66□□□□□ -0.38
CDH1-202ENST00000422392 DLX6P56179 175 aa12.66□□□□□ -0.38
CDH1-202ENST00000422392 COX19Q49B96 90 aa12.66□□□□□ -0.38
CDH1-202ENST00000422392 OR4A5Q8NH83 315 aa12.66□□□□□ -0.38
CDH1-202ENST00000422392 PRRG2O14669 202 aa12.66□□□□□ -0.38
CDH1-202ENST00000422392 RPLP1P05386 114 aaKnown RBP12.66□□□□□ -0.38
CDH1-202ENST00000422392 FAM87AP0C7U9 286 aa12.66□□□□□ -0.38
CDH1-202ENST00000422392 MYCNOSP40205 109 aa12.66□□□□□ -0.38
CDH1-202ENST00000422392 TFPI2P48307 235 aa12.66□□□□□ -0.38
CDH1-202ENST00000422392 TCF24Q7RTU0 167 aa12.66□□□□□ -0.38
CDH1-202ENST00000422392 C11orf42Q8N5U0 333 aa12.66□□□□□ -0.38
CDH1-202ENST00000422392 PRSS33Q8NF86 280 aa12.66□□□□□ -0.38
CDH1-202ENST00000422392 RNASE6Q93091 150 aaKnown RBP12.66□□□□□ -0.38
CDH1-202ENST00000422392 C7orf69Q9H7B7 122 aa12.66□□□□□ -0.38
CDH1-202ENST00000422392 LYNX1G3V0Z9 82 aa12.65□□□□□ -0.38
CDH1-202ENST00000422392 LYNX1P0DP58 116 aa12.65□□□□□ -0.38
CDH1-202ENST00000422392 CTRLP40313 264 aa12.65□□□□□ -0.38
CDH1-202ENST00000422392 OR4B1Q8NGF8 309 aa12.65□□□□□ -0.38
CDH1-202ENST00000422392 GRAMD2BQ96HH9 432 aa12.65□□□□□ -0.38
CDH1-202ENST00000422392 EPDR1Q9UM22 224 aa12.65□□□□□ -0.38
CDH1-202ENST00000422392 FAM231DQ6ZW35 169 aa12.65□□□□□ -0.39
CDH1-202ENST00000422392 Q71RC1 249 aaPredicted RBP12.65□□□□□ -0.39
CDH1-202ENST00000422392 LINC00311Q8N616 119 aa12.65□□□□□ -0.39
CDH1-202ENST00000422392 ABHD17AQ96GS6 310 aa12.65□□□□□ -0.39
CDH1-202ENST00000422392 DYNLRB1Q9NP97 96 aa12.65□□□□□ -0.39
CDH1-202ENST00000422392 NBASA2RRP1 2371 aa12.64□□□□□ -0.39
CDH1-202ENST00000422392 TOX4O94842 621 aa12.64□□□□□ -0.39
CDH1-202ENST00000422392 TMEM155Q4W5P6 130 aa12.64□□□□□ -0.39
CDH1-202ENST00000422392 OR2D3Q8NGH3 330 aa12.64□□□□□ -0.39
CDH1-202ENST00000422392 NBEAP1P0C6P0 100 aa12.64□□□□□ -0.39
CDH1-202ENST00000422392 ZNF596Q8TC21 504 aa12.64□□□□□ -0.39
CDH1-202ENST00000422392 PERPQ96FX8 193 aa12.64□□□□□ -0.39
CDH1-202ENST00000422392 PRRX1P54821 245 aa12.63□□□□□ -0.39
CDH1-202ENST00000422392 MMDQ15546 238 aa12.63□□□□□ -0.39
CDH1-202ENST00000422392 RNASEKQ6P5S7 137 aaKnown RBP12.63□□□□□ -0.39
CDH1-202ENST00000422392 BORCS7Q96B45 105 aa12.63□□□□□ -0.39
CDH1-202ENST00000422392 TMEM208Q9BTX3 173 aa12.63□□□□□ -0.39
CDH1-202ENST00000422392 CLEC7AQ9BXN2 247 aa12.63□□□□□ -0.39
CDH1-202ENST00000422392 E7EQL1 145 aa12.63□□□□□ -0.39
CDH1-202ENST00000422392 M0QZ24 198 aa12.63□□□□□ -0.39
CDH1-202ENST00000422392 M0QZK8 103 aa12.63□□□□□ -0.39
CDH1-202ENST00000422392 RPL27AP46776 148 aaKnown RBP12.63□□□□□ -0.39
CDH1-202ENST00000422392 PRR30Q53SZ7 412 aaPredicted RBP12.63□□□□□ -0.39
CDH1-202ENST00000422392 FAM71F2Q6NXP2 309 aa12.63□□□□□ -0.39
CDH1-202ENST00000422392 WIPF2Q8TF74 440 aaPredicted RBP12.63□□□□□ -0.39
CDH1-202ENST00000422392 TMEM133Q9H2Q1 129 aa12.63□□□□□ -0.39
CDH1-202ENST00000422392 LPAR2Q9HBW0 351 aa12.63□□□□□ -0.39
CDH1-202ENST00000422392 TRAV8-1A0A0A6YYK1 113 aa12.62□□□□□ -0.39
CDH1-202ENST00000422392 HSBP1O75506 76 aa12.62□□□□□ -0.39
CDH1-202ENST00000422392 HIST1H1EP10412 219 aaKnown RBP12.62□□□□□ -0.39
CDH1-202ENST00000422392 ZNF137PP52743 207 aa12.62□□□□□ -0.39
CDH1-202ENST00000422392 SH2D7A6NKC9 451 aaPredicted RBP12.62□□□□□ -0.39
CDH1-202ENST00000422392 CRYGCP07315 174 aa12.62□□□□□ -0.39
CDH1-202ENST00000422392 NPSP0C0P6 89 aa12.62□□□□□ -0.39
CDH1-202ENST00000422392 MC5RP33032 325 aa12.62□□□□□ -0.39
CDH1-202ENST00000422392 PMCHL1Q16048 86 aa12.62□□□□□ -0.39
CDH1-202ENST00000422392 GFRALQ6UXV0 394 aa12.62□□□□□ -0.39
CDH1-202ENST00000422392 KIR3DL3Q8N743 410 aa12.62□□□□□ -0.39
CDH1-202ENST00000422392 ALKBH7Q9BT30 221 aaPredicted RBP12.62□□□□□ -0.39
CDH1-202ENST00000422392 SHISA9B4DS77 424 aa12.61□□□□□ -0.39
CDH1-202ENST00000422392 HYPMO75409 117 aa12.61□□□□□ -0.39
CDH1-202ENST00000422392 GP9P14770 177 aa12.61□□□□□ -0.39
CDH1-202ENST00000422392 FOXA3P55318 350 aaPredicted RBP12.61□□□□□ -0.39
CDH1-202ENST00000422392 IGFBPL1Q8WX77 278 aa12.61□□□□□ -0.39
CDH1-202ENST00000422392 ASCL2Q99929 193 aa12.61□□□□□ -0.39
CDH1-202ENST00000422392 IGHV2-26A0A0B4J1V2 119 aa12.61□□□□□ -0.39
CDH1-202ENST00000422392 M0R2Z0 102 aa12.61□□□□□ -0.39
CDH1-202ENST00000422392 EBLN2Q6P2I7 272 aa12.61□□□□□ -0.39
CDH1-202ENST00000422392 Q8NA96 180 aa12.61□□□□□ -0.39
CDH1-202ENST00000422392 GTSF1Q8WW33 167 aa12.61□□□□□ -0.39
CDH1-202ENST00000422392 GPR82Q96P67 336 aa12.61□□□□□ -0.39
CDH1-202ENST00000422392 Q9H3A6 140 aa12.61□□□□□ -0.39
CDH1-202ENST00000422392 ZNF835Q9Y2P0 537 aa12.61□□□□□ -0.39
CDH1-202ENST00000422392 HRNRQ86YZ3 2850 aaPredicted RBP12.6□□□□□ -0.39
CDH1-202ENST00000422392 SPTA1P02549 2419 aa12.6□□□□□ -0.39
CDH1-202ENST00000422392 IGLC2P0DOY2 106 aa12.6□□□□□ -0.39
CDH1-202ENST00000422392 IGLC3P0DOY3 106 aa12.6□□□□□ -0.39
CDH1-202ENST00000422392 COX7A1P24310 79 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms