RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 IL17DQ8TAD2 202 aa16.21■□□□□ 0.19
TRAF4-204ENST00000422344 OVOL2Q9BRP0 275 aa16.21■□□□□ 0.19
TRAF4-204ENST00000422344 LYRM1O43325 122 aa16.2■□□□□ 0.18
TRAF4-204ENST00000422344 PSG1P11464 419 aa16.2■□□□□ 0.18
TRAF4-204ENST00000422344 GAMTQ14353 236 aa16.2■□□□□ 0.18
TRAF4-204ENST00000422344 USF2Q15853 346 aaPredicted RBP16.2■□□□□ 0.18
TRAF4-204ENST00000422344 ZNF124Q15973 351 aa16.2■□□□□ 0.18
TRAF4-204ENST00000422344 OR51G1Q8NGK1 321 aa16.2■□□□□ 0.18
TRAF4-204ENST00000422344 SPRY2O43597 315 aa16.19■□□□□ 0.18
TRAF4-204ENST00000422344 DEFB131AP59861 70 aa16.19■□□□□ 0.18
TRAF4-204ENST00000422344 DEFB135Q30KP9 77 aa16.19■□□□□ 0.18
TRAF4-204ENST00000422344 CCDC32Q9BV29 185 aa16.19■□□□□ 0.18
TRAF4-204ENST00000422344 C20orf85Q9H1P6 137 aa16.19■□□□□ 0.18
TRAF4-204ENST00000422344 PFDN2Q9UHV9 154 aa16.19■□□□□ 0.18
TRAF4-204ENST00000422344 TP53TG1Q9Y2A0 90 aa16.19■□□□□ 0.18
TRAF4-204ENST00000422344 U3KQE9 123 aa16.19■□□□□ 0.18
TRAF4-204ENST00000422344 PLA2G10O15496 165 aa16.18■□□□□ 0.18
TRAF4-204ENST00000422344 AP2S1P53680 142 aaPredicted RBP16.18■□□□□ 0.18
TRAF4-204ENST00000422344 SPANXN5Q5MJ07 72 aa16.18■□□□□ 0.18
TRAF4-204ENST00000422344 RNF125Q96EQ8 232 aa16.18■□□□□ 0.18
TRAF4-204ENST00000422344 PBDC1Q9BVG4 233 aa16.18■□□□□ 0.18
TRAF4-204ENST00000422344 STRAPQ9Y3F4 350 aaKnown RBP16.18■□□□□ 0.18
TRAF4-204ENST00000422344 NUP62P37198 522 aaPredicted RBP16.17■□□□□ 0.18
TRAF4-204ENST00000422344 NKX2-1P43699 371 aaPredicted RBP16.17■□□□□ 0.18
TRAF4-204ENST00000422344 LEMD1Q68G75 181 aa16.17■□□□□ 0.18
TRAF4-204ENST00000422344 C16orf54Q6UWD8 224 aa16.17■□□□□ 0.18
TRAF4-204ENST00000422344 MPTX1A8MV57 137 aa16.16■□□□□ 0.18
TRAF4-204ENST00000422344 H3BP45 60 aa16.16■□□□□ 0.18
TRAF4-204ENST00000422344 K7EQG2 157 aa16.16■□□□□ 0.18
TRAF4-204ENST00000422344 ZNF90Q03938 601 aa16.16■□□□□ 0.18
TRAF4-204ENST00000422344 LINC00299Q6ZSB3 139 aa16.16■□□□□ 0.18
TRAF4-204ENST00000422344 FAM24BQ8N5W8 94 aa16.16■□□□□ 0.18
TRAF4-204ENST00000422344 GLMPQ8WWB7 406 aa16.16■□□□□ 0.18
TRAF4-204ENST00000422344 CSTL1Q9H114 145 aa16.16■□□□□ 0.18
TRAF4-204ENST00000422344 POLR2GP62487 172 aaKnown RBP eCLIP16.15■□□□□ 0.18
TRAF4-204ENST00000422344 ID3Q02535 119 aa16.15■□□□□ 0.18
TRAF4-204ENST00000422344 MITD1Q8WV92 249 aa16.15■□□□□ 0.18
TRAF4-204ENST00000422344 S100ZQ8WXG8 99 aa16.15■□□□□ 0.18
TRAF4-204ENST00000422344 RNF183Q96D59 192 aa16.15■□□□□ 0.18
TRAF4-204ENST00000422344 IGKV1D-37A0A075B6S9 117 aa16.14■□□□□ 0.17
TRAF4-204ENST00000422344 SNRPGP15A8MWD9 76 aa16.14■□□□□ 0.17
TRAF4-204ENST00000422344 SSSCA1O60232 199 aa16.14■□□□□ 0.17
TRAF4-204ENST00000422344 SCGB1D2O95969 90 aa16.14■□□□□ 0.17
TRAF4-204ENST00000422344 TCRBP04435 133 aa16.14■□□□□ 0.17
TRAF4-204ENST00000422344 ZNF688P0C7X2 276 aa16.14■□□□□ 0.17
TRAF4-204ENST00000422344 LYZP61626 148 aa16.14■□□□□ 0.17
TRAF4-204ENST00000422344 OR2F1Q13607 317 aa16.14■□□□□ 0.17
TRAF4-204ENST00000422344 IAH1Q2TAA2 248 aaPredicted RBP16.14■□□□□ 0.17
TRAF4-204ENST00000422344 OR8G2PQ6IF36 304 aa16.14■□□□□ 0.17
TRAF4-204ENST00000422344 STHQ8IWL8 128 aa16.14■□□□□ 0.17
TRAF4-204ENST00000422344 OR4D5Q8NGN0 318 aa16.14■□□□□ 0.17
TRAF4-204ENST00000422344 TRGV9Q99603 122 aa16.14■□□□□ 0.17
TRAF4-204ENST00000422344 PSENENQ9NZ42 101 aa16.14■□□□□ 0.17
TRAF4-204ENST00000422344 TRAV6A0A075B6T7 132 aa16.13■□□□□ 0.17
TRAF4-204ENST00000422344 BUB3O43684 328 aa16.13■□□□□ 0.17
TRAF4-204ENST00000422344 JTBO76095 146 aa16.13■□□□□ 0.17
TRAF4-204ENST00000422344 AKR1C1Q04828 323 aa16.13■□□□□ 0.17
TRAF4-204ENST00000422344 SIGLEC15Q6ZMC9 328 aa16.13■□□□□ 0.17
TRAF4-204ENST00000422344 DCANP1Q8TF63 244 aa16.13■□□□□ 0.17
TRAF4-204ENST00000422344 PPP1R14BQ96C90 147 aa16.13■□□□□ 0.17
TRAF4-204ENST00000422344 GSKIPQ9P0R6 139 aa16.13■□□□□ 0.17
TRAF4-204ENST00000422344 PLECQ15149 4684 aaKnown RBP16.12■□□□□ 0.17
TRAF4-204ENST00000422344 THAP8Q8NA92 274 aa16.12■□□□□ 0.17
TRAF4-204ENST00000422344 NUDT15Q9NV35 164 aa16.12■□□□□ 0.17
TRAF4-204ENST00000422344 PRSS46E5RG02 174 aa16.11■□□□□ 0.17
TRAF4-204ENST00000422344 CFDP00746 253 aaPredicted RBP16.11■□□□□ 0.17
TRAF4-204ENST00000422344 ZNF846Q147U1 533 aa16.11■□□□□ 0.17
TRAF4-204ENST00000422344 MZT2BQ6NZ67 158 aa16.11■□□□□ 0.17
TRAF4-204ENST00000422344 ACOT7LQ6ZUV0 252 aa16.11■□□□□ 0.17
TRAF4-204ENST00000422344 ZBTB8BQ8NAP8 495 aaPredicted RBP16.11■□□□□ 0.17
TRAF4-204ENST00000422344 NRN1Q9NPD7 142 aa16.11■□□□□ 0.17
TRAF4-204ENST00000422344 A0A0J9YWU9 116 aa16.1■□□□□ 0.17
TRAF4-204ENST00000422344 FAM240BA0A1B0GVZ2 78 aa16.1■□□□□ 0.17
TRAF4-204ENST00000422344 SMCO3A2RU48 225 aa16.1■□□□□ 0.17
TRAF4-204ENST00000422344 CA1P00915 261 aaPredicted RBP16.1■□□□□ 0.17
TRAF4-204ENST00000422344 SNRPD3P62318 126 aaKnown RBP16.1■□□□□ 0.17
TRAF4-204ENST00000422344 PSMG4Q5JS54 123 aa16.1■□□□□ 0.17
TRAF4-204ENST00000422344 GATAD1Q8WUU5 269 aa16.1■□□□□ 0.17
TRAF4-204ENST00000422344 SMIM8Q96KF7 97 aa16.1■□□□□ 0.17
TRAF4-204ENST00000422344 RAB40CQ96S21 281 aa16.1■□□□□ 0.17
TRAF4-204ENST00000422344 FBXL17Q9UF56 701 aa16.1■□□□□ 0.17
TRAF4-204ENST00000422344 IGKV1OR2-108A0A075B7D4 117 aa16.09■□□□□ 0.17
TRAF4-204ENST00000422344 A6NHS1 94 aa16.09■□□□□ 0.17
TRAF4-204ENST00000422344 H2AFB2P0C5Z0 115 aa16.09■□□□□ 0.17
TRAF4-204ENST00000422344 ZNF431Q8TF32 576 aaPredicted RBP16.09■□□□□ 0.17
TRAF4-204ENST00000422344 FAM25EA8MYX2 175 aa16.08■□□□□ 0.16
TRAF4-204ENST00000422344 ACTL10Q5JWF8 245 aa16.08■□□□□ 0.16
TRAF4-204ENST00000422344 TMEM217Q8N7C4 229 aa16.08■□□□□ 0.16
TRAF4-204ENST00000422344 BPIFCQ8NFQ6 507 aa16.08■□□□□ 0.16
TRAF4-204ENST00000422344 SEC22CQ9BRL7 303 aa16.08■□□□□ 0.16
TRAF4-204ENST00000422344 WDR12Q9GZL7 423 aaKnown RBP16.08■□□□□ 0.16
TRAF4-204ENST00000422344 KNCNA6PVL3 124 aa16.07■□□□□ 0.16
TRAF4-204ENST00000422344 CCSO14618 274 aa16.07■□□□□ 0.16
TRAF4-204ENST00000422344 C1orf194Q5T5A4 169 aa16.07■□□□□ 0.16
TRAF4-204ENST00000422344 RARRES2Q99969 163 aa16.07■□□□□ 0.16
TRAF4-204ENST00000422344 PTTG2Q9NZH5 202 aa16.07■□□□□ 0.16
TRAF4-204ENST00000422344 ALMS1Q8TCU4 4167 aa16.06■□□□□ 0.16
TRAF4-204ENST00000422344 TSC22D2O75157 780 aa16.06■□□□□ 0.16
TRAF4-204ENST00000422344 METTL15P1P0C7V9 234 aa16.06■□□□□ 0.16
TRAF4-204ENST00000422344 S100A7P31151 101 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms