RNA–Protein interactions for RNA: ENST00000422026.1

SSX2IP-202, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-202ENST00000422026 CCDC140Q96MF4 163 aa11.19□□□□□ -0.62
SSX2IP-202ENST00000422026 MAP1LC3BQ9GZQ8 125 aa11.19□□□□□ -0.62
SSX2IP-202ENST00000422026 HRH4Q9H3N8 390 aa11.19□□□□□ -0.62
SSX2IP-202ENST00000422026 DNAJC4Q9NNZ3 241 aa11.19□□□□□ -0.62
SSX2IP-202ENST00000422026 MAP1AP78559 2803 aaPredicted RBP11.18□□□□□ -0.62
SSX2IP-202ENST00000422026 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.18□□□□□ -0.62
SSX2IP-202ENST00000422026 CLEC3BP05452 202 aa11.18□□□□□ -0.62
SSX2IP-202ENST00000422026 CTSGP08311 255 aa11.18□□□□□ -0.62
SSX2IP-202ENST00000422026 GATA2P23769 480 aaPredicted RBP11.18□□□□□ -0.62
SSX2IP-202ENST00000422026 PPT1P50897 306 aa11.18□□□□□ -0.62
SSX2IP-202ENST00000422026 FAM78BQ5VT40 261 aa11.18□□□□□ -0.62
SSX2IP-202ENST00000422026 C10orf113Q5VZT2 155 aa11.18□□□□□ -0.62
SSX2IP-202ENST00000422026 ZNF343Q6P1L6 599 aa11.18□□□□□ -0.62
SSX2IP-202ENST00000422026 CLEC19AQ6UXS0 136 aa11.18□□□□□ -0.62
SSX2IP-202ENST00000422026 ZNF329Q86UD4 541 aa11.18□□□□□ -0.62
SSX2IP-202ENST00000422026 COMMD7Q86VX2 200 aa11.18□□□□□ -0.62
SSX2IP-202ENST00000422026 OR4X2Q8NGF9 303 aa11.18□□□□□ -0.62
SSX2IP-202ENST00000422026 RAB24Q969Q5 203 aa11.18□□□□□ -0.62
SSX2IP-202ENST00000422026 MARC2Q969Z3 335 aa11.18□□□□□ -0.62
SSX2IP-202ENST00000422026 PBDC1Q9BVG4 233 aa11.18□□□□□ -0.62
SSX2IP-202ENST00000422026 SLC25A22Q9H936 323 aa11.18□□□□□ -0.62
SSX2IP-202ENST00000422026 FUT9Q9Y231 359 aa11.18□□□□□ -0.62
SSX2IP-202ENST00000422026 S4R3C0 116 aa11.18□□□□□ -0.62
SSX2IP-202ENST00000422026 RAB19A4D1S5 217 aa11.17□□□□□ -0.62
SSX2IP-202ENST00000422026 IFNA1P01562 189 aa11.17□□□□□ -0.62
SSX2IP-202ENST00000422026 IGHV3-23P01764 117 aa11.17□□□□□ -0.62
SSX2IP-202ENST00000422026 TAGLN2P37802 199 aaKnown RBP11.17□□□□□ -0.62
SSX2IP-202ENST00000422026 DEFA5Q01523 94 aa11.17□□□□□ -0.62
SSX2IP-202ENST00000422026 ZNF726P1Q15940 193 aa11.17□□□□□ -0.62
SSX2IP-202ENST00000422026 KHDC3LQ587J8 217 aa11.17□□□□□ -0.62
SSX2IP-202ENST00000422026 GCSAMLQ5JQS6 135 aa11.17□□□□□ -0.62
SSX2IP-202ENST00000422026 LCN15Q6UWW0 184 aa11.17□□□□□ -0.62
SSX2IP-202ENST00000422026 KLHDC1Q8N7A1 406 aa11.17□□□□□ -0.62
SSX2IP-202ENST00000422026 OR1B1Q8NGR6 318 aa11.17□□□□□ -0.62
SSX2IP-202ENST00000422026 OR4F5Q8NH21 305 aa11.17□□□□□ -0.62
SSX2IP-202ENST00000422026 MYOZ3Q8TDC0 251 aa11.17□□□□□ -0.62
SSX2IP-202ENST00000422026 WFDC12Q8WWY7 111 aa11.17□□□□□ -0.62
SSX2IP-202ENST00000422026 RNF125Q96EQ8 232 aa11.17□□□□□ -0.62
SSX2IP-202ENST00000422026 KLK15Q9H2R5 256 aa11.17□□□□□ -0.62
SSX2IP-202ENST00000422026 TECRQ9NZ01 308 aaKnown RBP11.17□□□□□ -0.62
SSX2IP-202ENST00000422026 HIGD1AQ9Y241 93 aa11.17□□□□□ -0.62
SSX2IP-202ENST00000422026 BAHCC1Q9P281 2608 aa11.17□□□□□ -0.62
SSX2IP-202ENST00000422026 OTOGQ6ZRI0 2925 aa11.16□□□□□ -0.62
SSX2IP-202ENST00000422026 WI2-2373I1.2A0A1W2PRP0 233 aa11.16□□□□□ -0.62
SSX2IP-202ENST00000422026 BMPR1BO00238 502 aa11.16□□□□□ -0.62
SSX2IP-202ENST00000422026 CXorf1O96002 111 aa11.16□□□□□ -0.62
SSX2IP-202ENST00000422026 IL4P05112 153 aa11.16□□□□□ -0.62
SSX2IP-202ENST00000422026 STAG3L2P0CL84 134 aa11.16□□□□□ -0.62
SSX2IP-202ENST00000422026 STAG3L3P0CL85 134 aa11.16□□□□□ -0.62
SSX2IP-202ENST00000422026 ORM2P19652 201 aa11.16□□□□□ -0.62
SSX2IP-202ENST00000422026 ARL3P36405 182 aa11.16□□□□□ -0.62
SSX2IP-202ENST00000422026 PSMB3P49720 205 aa11.16□□□□□ -0.62
SSX2IP-202ENST00000422026 LYZP61626 148 aa11.16□□□□□ -0.62
SSX2IP-202ENST00000422026 PMS2P11Q13670 270 aa11.16□□□□□ -0.62
SSX2IP-202ENST00000422026 UQCC3Q6UW78 93 aa11.16□□□□□ -0.62
SSX2IP-202ENST00000422026 PQLC2Q6ZP29 291 aa11.16□□□□□ -0.62
SSX2IP-202ENST00000422026 EIF4E3Q8N5X7 224 aaKnown RBP11.16□□□□□ -0.62
SSX2IP-202ENST00000422026 STXBP6Q8NFX7 210 aa11.16□□□□□ -0.62
SSX2IP-202ENST00000422026 TMEM37Q8WXS4 190 aa11.16□□□□□ -0.62
SSX2IP-202ENST00000422026 UBE2E2Q96LR5 201 aa11.16□□□□□ -0.62
SSX2IP-202ENST00000422026 GNB4Q9HAV0 340 aa11.16□□□□□ -0.62
SSX2IP-202ENST00000422026 ACANP16112 2415 aa11.16□□□□□ -0.62
SSX2IP-202ENST00000422026 C8orf88P0DMB2 117 aa11.15□□□□□ -0.62
SSX2IP-202ENST00000422026 ADMP35318 185 aa11.15□□□□□ -0.62
SSX2IP-202ENST00000422026 LINC00305Q7Z4B0 112 aa11.15□□□□□ -0.62
SSX2IP-202ENST00000422026 ZNF491Q8N8L2 437 aa11.15□□□□□ -0.62
SSX2IP-202ENST00000422026 CHRDL1Q9BU40 450 aa11.15□□□□□ -0.62
SSX2IP-202ENST00000422026 SEPSECSQ9HD40 501 aaKnown RBP11.15□□□□□ -0.62
SSX2IP-202ENST00000422026 DOK5Q9P104 306 aa11.15□□□□□ -0.62
SSX2IP-202ENST00000422026 A0A1B0GUS0 222 aa11.14□□□□□ -0.63
SSX2IP-202ENST00000422026 GGCTO75223 188 aaKnown RBP11.14□□□□□ -0.63
SSX2IP-202ENST00000422026 OR5AU1Q8NGC0 362 aa11.14□□□□□ -0.63
SSX2IP-202ENST00000422026 FAM210AQ96ND0 272 aa11.14□□□□□ -0.63
SSX2IP-202ENST00000422026 SMDT1Q9H4I9 107 aa11.14□□□□□ -0.63
SSX2IP-202ENST00000422026 MANBALQ9NQG1 85 aa11.14□□□□□ -0.63
SSX2IP-202ENST00000422026 TMEM167BQ9NRX6 74 aa11.14□□□□□ -0.63
SSX2IP-202ENST00000422026 MRPL27Q9P0M9 148 aaKnown RBP11.14□□□□□ -0.63
SSX2IP-202ENST00000422026 PEF1Q9UBV8 284 aaKnown RBP11.14□□□□□ -0.63
SSX2IP-202ENST00000422026 PUS1Q9Y606 427 aaKnown RBP eCLIP11.14□□□□□ -0.63
SSX2IP-202ENST00000422026 TLN2Q9Y4G6 2542 aa11.14□□□□□ -0.63
SSX2IP-202ENST00000422026 NDUFA4O00483 81 aa11.13□□□□□ -0.63
SSX2IP-202ENST00000422026 IGHV3-11P01762 117 aa11.13□□□□□ -0.63
SSX2IP-202ENST00000422026 RPLP1P05386 114 aaKnown RBP11.13□□□□□ -0.63
SSX2IP-202ENST00000422026 LGALS1P09382 135 aaKnown RBP11.13□□□□□ -0.63
SSX2IP-202ENST00000422026 PATE2Q6UY27 113 aa11.13□□□□□ -0.63
SSX2IP-202ENST00000422026 MIR17HGQ75NE6 70 aa11.13□□□□□ -0.63
SSX2IP-202ENST00000422026 SSX7Q7RTT5 188 aa11.13□□□□□ -0.63
SSX2IP-202ENST00000422026 LINC01006Q8NI28 216 aa11.13□□□□□ -0.63
SSX2IP-202ENST00000422026 RABAC1Q9UI14 185 aa11.13□□□□□ -0.63
SSX2IP-202ENST00000422026 CELSR1Q9NYQ6 3014 aa11.13□□□□□ -0.63
SSX2IP-202ENST00000422026 SONP18583 2426 aaKnown RBP11.12□□□□□ -0.63
SSX2IP-202ENST00000422026 A0A1B0GV50 99 aa11.12□□□□□ -0.63
SSX2IP-202ENST00000422026 ANKRD34BA5PLL1 514 aa11.12□□□□□ -0.63
SSX2IP-202ENST00000422026 ARL14EPLP0DKL9 152 aa11.12□□□□□ -0.63
SSX2IP-202ENST00000422026 CDX1P47902 265 aaPredicted RBP11.12□□□□□ -0.63
SSX2IP-202ENST00000422026 FGF8P55075 233 aaPredicted RBP11.12□□□□□ -0.63
SSX2IP-202ENST00000422026 KIAA0141Q14154 515 aaPredicted RBP11.12□□□□□ -0.63
SSX2IP-202ENST00000422026 PEA15Q15121 130 aa11.12□□□□□ -0.63
SSX2IP-202ENST00000422026 IQCF2Q8IXL9 164 aa11.12□□□□□ -0.63
SSX2IP-202ENST00000422026 SHANK2-AS3Q9BTD1 123 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms