RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 SRPXP78539 464 aa5.18□□□□□ -1.58
HMGN1-205ENST00000419378 RELQ04864 619 aaPredicted RBP5.18□□□□□ -1.58
HMGN1-205ENST00000419378 GUCA2BQ16661 112 aa5.18□□□□□ -1.58
HMGN1-205ENST00000419378 BSXQ3C1V8 233 aa5.18□□□□□ -1.58
HMGN1-205ENST00000419378 NMSQ5H8A3 153 aa5.18□□□□□ -1.58
HMGN1-205ENST00000419378 KRTAP5-3Q6L8H2 238 aa5.18□□□□□ -1.58
HMGN1-205ENST00000419378 NRACQ8N912 160 aa5.18□□□□□ -1.58
HMGN1-205ENST00000419378 OR52E5Q8NH55 327 aa5.18□□□□□ -1.58
HMGN1-205ENST00000419378 TXN2Q99757 166 aa5.18□□□□□ -1.58
HMGN1-205ENST00000419378 NEURL2Q9BR09 285 aa5.18□□□□□ -1.58
HMGN1-205ENST00000419378 C20orf24Q9BUV8 137 aa5.18□□□□□ -1.58
HMGN1-205ENST00000419378 DAZ1Q9NQZ3 744 aaKnown RBP5.18□□□□□ -1.58
HMGN1-205ENST00000419378 MRPL27Q9P0M9 148 aaKnown RBP5.18□□□□□ -1.58
HMGN1-205ENST00000419378 KCNIP3Q9Y2W7 256 aa5.18□□□□□ -1.58
HMGN1-205ENST00000419378 RYR3Q15413 4870 aa5.18□□□□□ -1.58
HMGN1-205ENST00000419378 IGHV3OR16-8A0A075B7F1 116 aa5.17□□□□□ -1.58
HMGN1-205ENST00000419378 TRAV25A0A0B4J276 109 aa5.17□□□□□ -1.58
HMGN1-205ENST00000419378 A0A0B4J2A0 478 aa5.17□□□□□ -1.58
HMGN1-205ENST00000419378 CEBPZOSA8MTT3 80 aa5.17□□□□□ -1.58
HMGN1-205ENST00000419378 GNG7O60262 68 aa5.17□□□□□ -1.58
HMGN1-205ENST00000419378 CD7P09564 240 aa5.17□□□□□ -1.58
HMGN1-205ENST00000419378 SULT1A3P0DMM9 295 aa5.17□□□□□ -1.58
HMGN1-205ENST00000419378 SULT1A4P0DMN0 295 aa5.17□□□□□ -1.58
HMGN1-205ENST00000419378 OPRK1P41145 380 aa5.17□□□□□ -1.58
HMGN1-205ENST00000419378 HTR2BP41595 481 aa5.17□□□□□ -1.58
HMGN1-205ENST00000419378 INPP1P49441 399 aa5.17□□□□□ -1.58
HMGN1-205ENST00000419378 SUB1P53999 127 aaKnown RBP eCLIP5.17□□□□□ -1.58
HMGN1-205ENST00000419378 TMEM128Q5BJH2 165 aa5.17□□□□□ -1.58
HMGN1-205ENST00000419378 TRIQKQ629K1 86 aa5.17□□□□□ -1.58
HMGN1-205ENST00000419378 LYZL2Q7Z4W2 148 aa5.17□□□□□ -1.58
HMGN1-205ENST00000419378 LGI3Q8N145 548 aa5.17□□□□□ -1.58
HMGN1-205ENST00000419378 SLC24A4Q8NFF2 622 aa5.17□□□□□ -1.58
HMGN1-205ENST00000419378 RCHY1Q96PM5 261 aa5.17□□□□□ -1.58
HMGN1-205ENST00000419378 SDHCQ99643 169 aaPredicted RBP5.17□□□□□ -1.58
HMGN1-205ENST00000419378 SLC25A21Q9BQT8 299 aaPredicted RBP5.17□□□□□ -1.58
HMGN1-205ENST00000419378 TM2D3Q9BRN9 247 aa5.17□□□□□ -1.58
HMGN1-205ENST00000419378 WFDC10AQ9H1F0 79 aa5.17□□□□□ -1.58
HMGN1-205ENST00000419378 FNDC4Q9H6D8 234 aaPredicted RBP5.17□□□□□ -1.58
HMGN1-205ENST00000419378 NDUFA13Q9P0J0 144 aa5.17□□□□□ -1.58
HMGN1-205ENST00000419378 MRPL36Q9P0J6 103 aaKnown RBP5.17□□□□□ -1.58
HMGN1-205ENST00000419378 SHPKQ9UHJ6 478 aa5.17□□□□□ -1.58
HMGN1-205ENST00000419378 STARD9Q9P2P6 4700 aa5.17□□□□□ -1.58
HMGN1-205ENST00000419378 NBEAL2Q6ZNJ1 2754 aa5.16□□□□□ -1.58
HMGN1-205ENST00000419378 DUXBA0A1W2PPF3 345 aa5.16□□□□□ -1.58
HMGN1-205ENST00000419378 C15orf62A8K5M9 175 aa5.16□□□□□ -1.58
HMGN1-205ENST00000419378 K7EMT4 169 aa5.16□□□□□ -1.58
HMGN1-205ENST00000419378 ZNF207O43670 478 aaKnown RBP5.16□□□□□ -1.58
HMGN1-205ENST00000419378 YIF1AO95070 293 aa5.16□□□□□ -1.58
HMGN1-205ENST00000419378 SFT2D2O95562 160 aa5.16□□□□□ -1.58
HMGN1-205ENST00000419378 HOXB5P09067 269 aa5.16□□□□□ -1.58
HMGN1-205ENST00000419378 NPBWR1P48145 328 aa5.16□□□□□ -1.58
HMGN1-205ENST00000419378 CCR6P51684 374 aa5.16□□□□□ -1.58
HMGN1-205ENST00000419378 TNFRSF9Q07011 255 aa5.16□□□□□ -1.58
HMGN1-205ENST00000419378 PPP1R1AQ13522 171 aa5.16□□□□□ -1.58
HMGN1-205ENST00000419378 SMCO1Q147U7 214 aa5.16□□□□□ -1.58
HMGN1-205ENST00000419378 ANKRD55Q3KP44 614 aa5.16□□□□□ -1.58
HMGN1-205ENST00000419378 LINC00322Q6ZN03 302 aaPredicted RBP5.16□□□□□ -1.58
HMGN1-205ENST00000419378 RBPMS2Q6ZRY4 209 aaKnown RBP5.16□□□□□ -1.58
HMGN1-205ENST00000419378 SLC16A13Q7RTY0 426 aa5.16□□□□□ -1.58
HMGN1-205ENST00000419378 CENPSQ8N2Z9 138 aa5.16□□□□□ -1.58
HMGN1-205ENST00000419378 DEFB125Q8N687 156 aa5.16□□□□□ -1.58
HMGN1-205ENST00000419378 DUSP18Q8NEJ0 188 aa5.16□□□□□ -1.58
HMGN1-205ENST00000419378 OR52B4Q8NGK2 314 aa5.16□□□□□ -1.58
HMGN1-205ENST00000419378 OR10C1Q96KK4 312 aa5.16□□□□□ -1.58
HMGN1-205ENST00000419378 SPAG8Q99932 426 aaPredicted RBP5.16□□□□□ -1.58
HMGN1-205ENST00000419378 TUBA4BQ9H853 241 aa5.16□□□□□ -1.58
HMGN1-205ENST00000419378 SRD5A3Q9H8P0 318 aa5.16□□□□□ -1.58
HMGN1-205ENST00000419378 CACFD1Q9UGQ2 172 aa5.16□□□□□ -1.58
HMGN1-205ENST00000419378 SACSQ9NZJ4 4579 aa5.16□□□□□ -1.58
HMGN1-205ENST00000419378 PIGBOS1A0A0B4J2F0 54 aa5.15□□□□□ -1.59
HMGN1-205ENST00000419378 IGHV7-4-1A0A0J9YVY3 117 aa5.15□□□□□ -1.59
HMGN1-205ENST00000419378 LINC00854A0A1B0GVQ3 168 aa5.15□□□□□ -1.59
HMGN1-205ENST00000419378 RPS10-NUDT3A0A1W2PQS6 291 aa5.15□□□□□ -1.59
HMGN1-205ENST00000419378 RBMY1BA6NDE4 496 aaKnown RBP5.15□□□□□ -1.59
HMGN1-205ENST00000419378 RBMY1EA6NEQ0 496 aaKnown RBP5.15□□□□□ -1.59
HMGN1-205ENST00000419378 NAP1L6A6NFF2 107 aa5.15□□□□□ -1.59
HMGN1-205ENST00000419378 OR11H12B2RN74 326 aa5.15□□□□□ -1.59
HMGN1-205ENST00000419378 CHEK1O14757 476 aa5.15□□□□□ -1.59
HMGN1-205ENST00000419378 CLN5O75503 358 aa5.15□□□□□ -1.59
HMGN1-205ENST00000419378 NDUFB6O95139 128 aa5.15□□□□□ -1.59
HMGN1-205ENST00000419378 TMEM50AO95807 157 aa5.15□□□□□ -1.59
HMGN1-205ENST00000419378 RBMY1DP0C7P1 496 aaKnown RBP5.15□□□□□ -1.59
HMGN1-205ENST00000419378 IL7P13232 177 aa5.15□□□□□ -1.59
HMGN1-205ENST00000419378 NPY1RP25929 384 aa5.15□□□□□ -1.59
HMGN1-205ENST00000419378 BTCP35070 178 aa5.15□□□□□ -1.59
HMGN1-205ENST00000419378 HAGHQ16775 308 aa5.15□□□□□ -1.59
HMGN1-205ENST00000419378 C2orf83Q53S99 150 aa5.15□□□□□ -1.59
HMGN1-205ENST00000419378 TOMM20LQ6UXN7 152 aa5.15□□□□□ -1.59
HMGN1-205ENST00000419378 ZNF600Q6ZNG1 722 aa5.15□□□□□ -1.59
HMGN1-205ENST00000419378 LRTM2Q8N967 370 aa5.15□□□□□ -1.59
HMGN1-205ENST00000419378 OR4X1Q8NH49 305 aa5.15□□□□□ -1.59
HMGN1-205ENST00000419378 OR1S1Q8NH92 325 aa5.15□□□□□ -1.59
HMGN1-205ENST00000419378 RNASEH2CQ8TDP1 164 aaKnown RBP5.15□□□□□ -1.59
HMGN1-205ENST00000419378 GINS3Q9BRX5 216 aa5.15□□□□□ -1.59
HMGN1-205ENST00000419378 RHPN1-AS1Q9BWJ2 59 aa5.15□□□□□ -1.59
HMGN1-205ENST00000419378 HIPK2Q9H2X6 1198 aa5.15□□□□□ -1.59
HMGN1-205ENST00000419378 RBKSQ9H477 322 aa5.15□□□□□ -1.59
HMGN1-205ENST00000419378 SMPXQ9UHP9 88 aa5.15□□□□□ -1.59
HMGN1-205ENST00000419378 PUS1Q9Y606 427 aaKnown RBP eCLIP5.15□□□□□ -1.59
HMGN1-205ENST00000419378 DYNC2H1Q8NCM8 4307 aaKnown RBP5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms