RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 SRP14P37108 136 aaKnown RBP7.12□□□□□ -1.27
LINCMD1-201ENST00000418518 RPL35P42766 123 aaKnown RBP7.12□□□□□ -1.27
LINCMD1-201ENST00000418518 TIGITQ495A1 244 aa7.12□□□□□ -1.27
LINCMD1-201ENST00000418518 C19orf54Q5BKX5 351 aa7.12□□□□□ -1.27
LINCMD1-201ENST00000418518 C5orf56Q8N8D9 126 aa7.12□□□□□ -1.27
LINCMD1-201ENST00000418518 TXN2Q99757 166 aa7.12□□□□□ -1.27
LINCMD1-201ENST00000418518 RASL11BQ9BPW5 248 aa7.12□□□□□ -1.27
LINCMD1-201ENST00000418518 FAM103A1Q9BTL3 118 aaKnown RBP7.12□□□□□ -1.27
LINCMD1-201ENST00000418518 ELOVL1Q9BW60 279 aa7.12□□□□□ -1.27
LINCMD1-201ENST00000418518 HIGD1AQ9Y241 93 aa7.12□□□□□ -1.27
LINCMD1-201ENST00000418518 PTPN13Q12923 2485 aa7.12□□□□□ -1.27
LINCMD1-201ENST00000418518 COL12A1Q99715 3063 aa7.11□□□□□ -1.27
LINCMD1-201ENST00000418518 TGIF2-C20orf24A0A0A6YYL0 155 aa7.11□□□□□ -1.27
LINCMD1-201ENST00000418518 IGHV3-21A0A0B4J1V1 117 aa7.11□□□□□ -1.27
LINCMD1-201ENST00000418518 WI2-2373I1.2A0A1W2PRP0 233 aa7.11□□□□□ -1.27
LINCMD1-201ENST00000418518 B4DSR2 109 aa7.11□□□□□ -1.27
LINCMD1-201ENST00000418518 H3BRN7 92 aa7.11□□□□□ -1.27
LINCMD1-201ENST00000418518 PHOX2AO14813 284 aa7.11□□□□□ -1.27
LINCMD1-201ENST00000418518 TYMSP04818 313 aa7.11□□□□□ -1.27
LINCMD1-201ENST00000418518 OR10J4P0C629 311 aa7.11□□□□□ -1.27
LINCMD1-201ENST00000418518 PYYP10082 97 aa7.11□□□□□ -1.27
LINCMD1-201ENST00000418518 MFAP4P55083 255 aa7.11□□□□□ -1.27
LINCMD1-201ENST00000418518 TAS2R60P59551 318 aa7.11□□□□□ -1.27
LINCMD1-201ENST00000418518 TEX38Q6PEX7 206 aa7.11□□□□□ -1.27
LINCMD1-201ENST00000418518 ZNF329Q86UD4 541 aa7.11□□□□□ -1.27
LINCMD1-201ENST00000418518 OR1B1Q8NGR6 318 aa7.11□□□□□ -1.27
LINCMD1-201ENST00000418518 PIFOQ8TCI5 191 aa7.11□□□□□ -1.27
LINCMD1-201ENST00000418518 VN1R17PQ8TDU5 208 aa7.11□□□□□ -1.27
LINCMD1-201ENST00000418518 SFRP2Q96HF1 295 aa7.11□□□□□ -1.27
LINCMD1-201ENST00000418518 FAM210BQ96KR6 192 aa7.11□□□□□ -1.27
LINCMD1-201ENST00000418518 IGF2BP2-AS1Q96M15 143 aa7.11□□□□□ -1.27
LINCMD1-201ENST00000418518 HSPB9Q9BQS6 159 aa7.11□□□□□ -1.27
LINCMD1-201ENST00000418518 SHANK2-AS3Q9BTD1 123 aa7.11□□□□□ -1.27
LINCMD1-201ENST00000418518 GSX1Q9H4S2 264 aaPredicted RBP7.11□□□□□ -1.27
LINCMD1-201ENST00000418518 THYN1Q9P016 225 aa7.11□□□□□ -1.27
LINCMD1-201ENST00000418518 CDC42EP3Q9UKI2 254 aa7.11□□□□□ -1.27
LINCMD1-201ENST00000418518 MOB4Q9Y3A3 225 aa7.11□□□□□ -1.27
LINCMD1-201ENST00000418518 URGCP-MRPS24S4R325 110 aa7.11□□□□□ -1.27
LINCMD1-201ENST00000418518 TRAV9-1A0A075B6T8 112 aa7.1□□□□□ -1.27
LINCMD1-201ENST00000418518 TRBV9A0A0B4J1U6 114 aa7.1□□□□□ -1.27
LINCMD1-201ENST00000418518 TRAV40A0A0B4J280 105 aa7.1□□□□□ -1.27
LINCMD1-201ENST00000418518 MDFIC2A0A1B0GVS7 189 aa7.1□□□□□ -1.27
LINCMD1-201ENST00000418518 C5orf52A6NGY3 159 aa7.1□□□□□ -1.27
LINCMD1-201ENST00000418518 K7EN84 100 aa7.1□□□□□ -1.27
LINCMD1-201ENST00000418518 IGLV2-8P01709 118 aa7.1□□□□□ -1.27
LINCMD1-201ENST00000418518 RD3LP0DJH9 198 aa7.1□□□□□ -1.27
LINCMD1-201ENST00000418518 ORM2P19652 201 aa7.1□□□□□ -1.27
LINCMD1-201ENST00000418518 S100PP25815 95 aa7.1□□□□□ -1.27
LINCMD1-201ENST00000418518 CRYBB3P26998 211 aa7.1□□□□□ -1.27
LINCMD1-201ENST00000418518 GALR1P47211 349 aa7.1□□□□□ -1.27
LINCMD1-201ENST00000418518 SUMO1P63165 101 aaKnown RBP7.1□□□□□ -1.27
LINCMD1-201ENST00000418518 LRRC75A-AS1Q8N1F1 130 aa7.1□□□□□ -1.27
LINCMD1-201ENST00000418518 ZNF491Q8N8L2 437 aa7.1□□□□□ -1.27
LINCMD1-201ENST00000418518 OCC1Q8TAD7 63 aa7.1□□□□□ -1.27
LINCMD1-201ENST00000418518 RNF125Q96EQ8 232 aa7.1□□□□□ -1.27
LINCMD1-201ENST00000418518 BTF3L4Q96K17 158 aa7.1□□□□□ -1.27
LINCMD1-201ENST00000418518 OR5B12Q96R08 314 aa7.1□□□□□ -1.27
LINCMD1-201ENST00000418518 ATP6V0BQ99437 205 aa7.1□□□□□ -1.27
LINCMD1-201ENST00000418518 SLC25A39Q9BZJ4 359 aaPredicted RBP7.1□□□□□ -1.27
LINCMD1-201ENST00000418518 SRD5A3Q9H8P0 318 aa7.1□□□□□ -1.27
LINCMD1-201ENST00000418518 C21orf62Q9NYP8 219 aa7.1□□□□□ -1.27
LINCMD1-201ENST00000418518 USP9YO00507 2555 aaPredicted RBP7.1□□□□□ -1.27
LINCMD1-201ENST00000418518 CSPG4Q6UVK1 2322 aa7.09□□□□□ -1.27
LINCMD1-201ENST00000418518 HELTA6NFD8 242 aa7.09□□□□□ -1.27
LINCMD1-201ENST00000418518 PGPEP1LA6NFU8 196 aa7.09□□□□□ -1.27
LINCMD1-201ENST00000418518 PEX7O00628 323 aa7.09□□□□□ -1.27
LINCMD1-201ENST00000418518 UBE2CO00762 179 aa7.09□□□□□ -1.27
LINCMD1-201ENST00000418518 MRPS12O15235 138 aaKnown RBP7.09□□□□□ -1.27
LINCMD1-201ENST00000418518 ATP6V0E1O15342 81 aa7.09□□□□□ -1.27
LINCMD1-201ENST00000418518 SCGB2A1O75556 95 aa7.09□□□□□ -1.27
LINCMD1-201ENST00000418518 NDUFB8O95169 186 aa7.09□□□□□ -1.27
LINCMD1-201ENST00000418518 BRI3O95415 125 aa7.09□□□□□ -1.27
LINCMD1-201ENST00000418518 GCGP01275 180 aa7.09□□□□□ -1.27
LINCMD1-201ENST00000418518 AMY1AP04745 511 aa7.09□□□□□ -1.27
LINCMD1-201ENST00000418518 NBEAP1P0C6P0 100 aa7.09□□□□□ -1.27
LINCMD1-201ENST00000418518 IGHV4-38-2P0DP08 117 aa7.09□□□□□ -1.27
LINCMD1-201ENST00000418518 HIST1H1EP10412 219 aaKnown RBP7.09□□□□□ -1.27
LINCMD1-201ENST00000418518 RPS10P46783 165 aaKnown RBP7.09□□□□□ -1.27
LINCMD1-201ENST00000418518 GNG4P50150 75 aa7.09□□□□□ -1.27
LINCMD1-201ENST00000418518 LYZP61626 148 aa7.09□□□□□ -1.27
LINCMD1-201ENST00000418518 FOXL1Q12952 345 aa7.09□□□□□ -1.27
LINCMD1-201ENST00000418518 CLEC12BQ2HXU8 276 aa7.09□□□□□ -1.27
LINCMD1-201ENST00000418518 CENPWQ5EE01 88 aa7.09□□□□□ -1.27
LINCMD1-201ENST00000418518 KLF17Q5JT82 389 aaPredicted RBP7.09□□□□□ -1.27
LINCMD1-201ENST00000418518 S100A7AQ86SG5 101 aa7.09□□□□□ -1.27
LINCMD1-201ENST00000418518 ZFP82Q8N141 532 aa7.09□□□□□ -1.27
LINCMD1-201ENST00000418518 SMIM12Q96EX1 92 aa7.09□□□□□ -1.27
LINCMD1-201ENST00000418518 ZNF414Q96IQ9 312 aa7.09□□□□□ -1.27
LINCMD1-201ENST00000418518 BEX4Q9NWD9 120 aaPredicted RBP7.09□□□□□ -1.27
LINCMD1-201ENST00000418518 RNF24Q9Y225 148 aa7.09□□□□□ -1.27
LINCMD1-201ENST00000418518 KLF12Q9Y4X4 402 aa7.09□□□□□ -1.27
LINCMD1-201ENST00000418518 KMT2BQ9UMN6 2715 aaPredicted RBP7.09□□□□□ -1.27
LINCMD1-201ENST00000418518 A0A0U1RQK1 487 aa7.08□□□□□ -1.28
LINCMD1-201ENST00000418518 A6NDX4 124 aa7.08□□□□□ -1.28
LINCMD1-201ENST00000418518 J3QLI3 93 aa7.08□□□□□ -1.28
LINCMD1-201ENST00000418518 GNG7O60262 68 aa7.08□□□□□ -1.28
LINCMD1-201ENST00000418518 S100A9P06702 114 aaKnown RBP7.08□□□□□ -1.28
LINCMD1-201ENST00000418518 CNN1P51911 297 aaKnown RBP7.08□□□□□ -1.28
LINCMD1-201ENST00000418518 LOXL1Q08397 574 aaPredicted RBP7.08□□□□□ -1.28
LINCMD1-201ENST00000418518 KCNIP4Q6PIL6 250 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms