RNA–Protein interactions for RNA: ENST00000418212.5

BDNF-208, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-208ENST00000418212 IGKV1-6A0A0C4DH72 117 aa10.9□□□□□ -0.67
BDNF-208ENST00000418212 HINT1P49773 126 aaPredicted RBP10.9□□□□□ -0.67
BDNF-208ENST00000418212 HSPB8Q9UJY1 196 aa10.9□□□□□ -0.67
BDNF-208ENST00000418212 PCNX3Q9H6A9 2034 aa10.89□□□□□ -0.67
BDNF-208ENST00000418212 M0R381 172 aa10.89□□□□□ -0.67
BDNF-208ENST00000418212 RPL23P62829 140 aaKnown RBP10.89□□□□□ -0.67
BDNF-208ENST00000418212 BRD3OSQ6XYD6 125 aa10.89□□□□□ -0.67
BDNF-208ENST00000418212 TEX45Q8NA69 505 aa10.89□□□□□ -0.67
BDNF-208ENST00000418212 TRAV5A0A0B4J249 113 aa10.89□□□□□ -0.67
BDNF-208ENST00000418212 IFITM10A6NMD0 228 aa10.89□□□□□ -0.67
BDNF-208ENST00000418212 COL8A2P25067 703 aa10.89□□□□□ -0.67
BDNF-208ENST00000418212 PRCDQ00LT1 54 aa10.89□□□□□ -0.67
BDNF-208ENST00000418212 EFNB3Q15768 340 aa10.89□□□□□ -0.67
BDNF-208ENST00000418212 MLANAQ16655 118 aa10.89□□□□□ -0.67
BDNF-208ENST00000418212 TREML4Q6UXN2 200 aa10.89□□□□□ -0.67
BDNF-208ENST00000418212 RNASEH2CQ8TDP1 164 aaKnown RBP10.89□□□□□ -0.67
BDNF-208ENST00000418212 SDF2L1Q9HCN8 221 aa10.89□□□□□ -0.67
BDNF-208ENST00000418212 IGKV1-16P04430 117 aa10.89□□□□□ -0.67
BDNF-208ENST00000418212 SRSF9Q13242 221 aaKnown RBP eCLIP10.89□□□□□ -0.67
BDNF-208ENST00000418212 KCNS1Q96KK3 526 aa10.89□□□□□ -0.67
BDNF-208ENST00000418212 PLXNA2O75051 1894 aa10.88□□□□□ -0.67
BDNF-208ENST00000418212 IGHV2-26A0A0B4J1V2 119 aa10.88□□□□□ -0.67
BDNF-208ENST00000418212 IGHV1-8P0DP01 117 aa10.88□□□□□ -0.67
BDNF-208ENST00000418212 FRMPD3Q5JV73 1810 aa10.88□□□□□ -0.67
BDNF-208ENST00000418212 A0A1W2PRX2 142 aa10.88□□□□□ -0.67
BDNF-208ENST00000418212 RHOGP84095 191 aa10.88□□□□□ -0.67
BDNF-208ENST00000418212 VENTXO95231 258 aa10.88□□□□□ -0.67
BDNF-208ENST00000418212 TDGF1P3P51864 188 aa10.88□□□□□ -0.67
BDNF-208ENST00000418212 C19orf35Q6ZS72 473 aa10.88□□□□□ -0.67
BDNF-208ENST00000418212 GLMPQ8WWB7 406 aa10.88□□□□□ -0.67
BDNF-208ENST00000418212 OR4C46A6NHA9 309 aa10.87□□□□□ -0.67
BDNF-208ENST00000418212 CA1P00915 261 aaPredicted RBP10.87□□□□□ -0.67
BDNF-208ENST00000418212 Q6ZR03 302 aa10.87□□□□□ -0.67
BDNF-208ENST00000418212 PKD1L2Q7Z442 2459 aa10.87□□□□□ -0.67
BDNF-208ENST00000418212 A0A087WWC5 75 aa10.87□□□□□ -0.67
BDNF-208ENST00000418212 E7EQL1 145 aa10.87□□□□□ -0.67
BDNF-208ENST00000418212 PSG9Q00887 426 aa10.87□□□□□ -0.67
BDNF-208ENST00000418212 TMEM97Q5BJF2 176 aa10.87□□□□□ -0.67
BDNF-208ENST00000418212 PRR31Q5SQ13 230 aa10.87□□□□□ -0.67
BDNF-208ENST00000418212 TCF23Q7RTU1 214 aa10.87□□□□□ -0.67
BDNF-208ENST00000418212 MSRB2Q9Y3D2 182 aa10.87□□□□□ -0.67
BDNF-208ENST00000418212 KIF26AQ9ULI4 1882 aaPredicted RBP10.87□□□□□ -0.67
BDNF-208ENST00000418212 LINC00614P0C842 121 aa10.87□□□□□ -0.67
BDNF-208ENST00000418212 GGTLC1Q9BX51 225 aa10.87□□□□□ -0.67
BDNF-208ENST00000418212 Q9H3A6 140 aa10.87□□□□□ -0.67
BDNF-208ENST00000418212 LIME1Q9H400 295 aa10.87□□□□□ -0.67
BDNF-208ENST00000418212 MTORP42345 2549 aa10.87□□□□□ -0.67
BDNF-208ENST00000418212 DUX4L9Q6RFH8 374 aaPredicted RBP10.86□□□□□ -0.67
BDNF-208ENST00000418212 RNF125Q96EQ8 232 aa10.86□□□□□ -0.67
BDNF-208ENST00000418212 HLA-DRB1P01911 266 aa10.86□□□□□ -0.67
BDNF-208ENST00000418212 SPATA31B1PQ5VZV4 182 aa10.86□□□□□ -0.67
BDNF-208ENST00000418212 NUDT10Q8NFP7 164 aa10.86□□□□□ -0.67
BDNF-208ENST00000418212 SEPSECSQ9HD40 501 aaKnown RBP10.86□□□□□ -0.67
BDNF-208ENST00000418212 CHD3Q12873 2000 aaKnown RBP10.86□□□□□ -0.67
BDNF-208ENST00000418212 FBLL1A6NHQ2 334 aaKnown RBP10.86□□□□□ -0.67
BDNF-208ENST00000418212 K7EM74 188 aa10.86□□□□□ -0.67
BDNF-208ENST00000418212 K7ENP7 123 aa10.86□□□□□ -0.67
BDNF-208ENST00000418212 TNFSF13O75888 250 aa10.86□□□□□ -0.67
BDNF-208ENST00000418212 SRSF4Q08170 494 aaKnown RBP10.86□□□□□ -0.67
BDNF-208ENST00000418212 ANKRD39Q53RE8 183 aa10.86□□□□□ -0.67
BDNF-208ENST00000418212 OCC1Q8TAD7 63 aa10.86□□□□□ -0.67
BDNF-208ENST00000418212 C18orf15Q96N68 181 aa10.86□□□□□ -0.67
BDNF-208ENST00000418212 RAB9AP51151 201 aa10.86□□□□□ -0.67
BDNF-208ENST00000418212 FAM19A2Q8N3H0 131 aa10.86□□□□□ -0.67
BDNF-208ENST00000418212 REV3LO60673 3130 aa10.85□□□□□ -0.67
BDNF-208ENST00000418212 SRD5A1P18405 259 aa10.85□□□□□ -0.67
BDNF-208ENST00000418212 CD33P20138 364 aa10.85□□□□□ -0.67
BDNF-208ENST00000418212 FAM159AQ6UWV7 190 aa10.85□□□□□ -0.67
BDNF-208ENST00000418212 GAFA1Q96PS6 74 aa10.85□□□□□ -0.67
BDNF-208ENST00000418212 TMEM136Q6ZRR5 245 aa10.85□□□□□ -0.67
BDNF-208ENST00000418212 TCF24Q7RTU0 167 aa10.85□□□□□ -0.67
BDNF-208ENST00000418212 ERASQ7Z444 233 aa10.85□□□□□ -0.67
BDNF-208ENST00000418212 GPR82Q96P67 336 aa10.85□□□□□ -0.67
BDNF-208ENST00000418212 TRBV20OR9-2A0A075B6H5 130 aa10.85□□□□□ -0.67
BDNF-208ENST00000418212 PPIFP30405 207 aaKnown RBP10.85□□□□□ -0.67
BDNF-208ENST00000418212 ALKBH7Q9BT30 221 aaPredicted RBP10.85□□□□□ -0.67
BDNF-208ENST00000418212 BPESC1Q9GZL8 116 aa10.85□□□□□ -0.67
BDNF-208ENST00000418212 AP5S1Q9NUS5 200 aa10.85□□□□□ -0.67
BDNF-208ENST00000418212 HIGD1CA8MV81 97 aa10.84□□□□□ -0.67
BDNF-208ENST00000418212 WNT2P09544 360 aa10.84□□□□□ -0.67
BDNF-208ENST00000418212 ZNF585BQ52M93 769 aa10.84□□□□□ -0.67
BDNF-208ENST00000418212 SSBP4Q9BWG4 385 aaPredicted RBP10.84□□□□□ -0.67
BDNF-208ENST00000418212 A0A1B0GV72 72 aa10.84□□□□□ -0.67
BDNF-208ENST00000418212 SNRPD3P62318 126 aaKnown RBP10.84□□□□□ -0.67
BDNF-208ENST00000418212 HBBP68871 147 aa10.84□□□□□ -0.67
BDNF-208ENST00000418212 TEX38Q6PEX7 206 aa10.84□□□□□ -0.67
BDNF-208ENST00000418212 WDR86Q86TI4 376 aa10.84□□□□□ -0.67
BDNF-208ENST00000418212 DERL1Q9BUN8 251 aa10.84□□□□□ -0.67
BDNF-208ENST00000418212 IGHV1-3A0A0C4DH29 117 aa10.84□□□□□ -0.67
BDNF-208ENST00000418212 A0A0G2JLM5 398 aa10.84□□□□□ -0.67
BDNF-208ENST00000418212 TCRBV4S1A1TA0A5B7 111 aa10.84□□□□□ -0.67
BDNF-208ENST00000418212 PRSS8Q16651 343 aa10.84□□□□□ -0.67
BDNF-208ENST00000418212 ASCL4Q6XD76 172 aa10.84□□□□□ -0.67
BDNF-208ENST00000418212 WFDC12Q8WWY7 111 aa10.84□□□□□ -0.67
BDNF-208ENST00000418212 IL36BQ9NZH7 164 aa10.84□□□□□ -0.67
BDNF-208ENST00000418212 POLQO75417 2590 aa10.84□□□□□ -0.67
BDNF-208ENST00000418212 NUDT3O95989 172 aa10.83□□□□□ -0.68
BDNF-208ENST00000418212 EFNA4P52798 201 aa10.83□□□□□ -0.68
BDNF-208ENST00000418212 ST6GALNAC3Q8NDV1 305 aa10.83□□□□□ -0.68
BDNF-208ENST00000418212 CYYR1Q96J86 154 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms