RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 OR10V1Q8NGI7 309 aa4.39□□□□□ -1.71
ECHDC1-206ENST00000417628 OR52N5Q8NH56 324 aa4.39□□□□□ -1.71
ECHDC1-206ENST00000417628 OR13C6PQ8NH95 151 aa4.39□□□□□ -1.71
ECHDC1-206ENST00000417628 KIR2DL5BQ8NHK3 375 aa4.39□□□□□ -1.71
ECHDC1-206ENST00000417628 NEIL2Q969S2 332 aa4.39□□□□□ -1.71
ECHDC1-206ENST00000417628 GNPNAT1Q96EK6 184 aaPredicted RBP4.39□□□□□ -1.71
ECHDC1-206ENST00000417628 ABHD14BQ96IU4 210 aa4.39□□□□□ -1.71
ECHDC1-206ENST00000417628 OXGR1Q96P68 337 aa4.39□□□□□ -1.71
ECHDC1-206ENST00000417628 AP1S3Q96PC3 154 aa4.39□□□□□ -1.71
ECHDC1-206ENST00000417628 GPER1Q99527 375 aa4.39□□□□□ -1.71
ECHDC1-206ENST00000417628 GPR21Q99679 349 aa4.39□□□□□ -1.71
ECHDC1-206ENST00000417628 ANAPC13Q9BS18 74 aa4.39□□□□□ -1.71
ECHDC1-206ENST00000417628 NPVFQ9HCQ7 196 aa4.39□□□□□ -1.71
ECHDC1-206ENST00000417628 DYNLRB1Q9NP97 96 aa4.39□□□□□ -1.71
ECHDC1-206ENST00000417628 THYN1Q9P016 225 aa4.39□□□□□ -1.71
ECHDC1-206ENST00000417628 IER3IP1Q9Y5U9 82 aa4.39□□□□□ -1.71
ECHDC1-206ENST00000417628 SLC25A15Q9Y619 301 aa4.39□□□□□ -1.71
ECHDC1-206ENST00000417628 HECTD4Q9Y4D8 3996 aa4.38□□□□□ -1.71
ECHDC1-206ENST00000417628 TRAV8-6A0A0B4J262 113 aa4.38□□□□□ -1.71
ECHDC1-206ENST00000417628 TEX48A0A1B0GUV7 120 aa4.38□□□□□ -1.71
ECHDC1-206ENST00000417628 ZNF736B4DX44 427 aaPredicted RBP4.38□□□□□ -1.71
ECHDC1-206ENST00000417628 ZNF732B4DXR9 585 aa4.38□□□□□ -1.71
ECHDC1-206ENST00000417628 C4orf51C9J302 202 aa4.38□□□□□ -1.71
ECHDC1-206ENST00000417628 F8W1H4 67 aa4.38□□□□□ -1.71
ECHDC1-206ENST00000417628 H0YJW9 148 aa4.38□□□□□ -1.71
ECHDC1-206ENST00000417628 RER1O15258 196 aa4.38□□□□□ -1.71
ECHDC1-206ENST00000417628 GPR137BO60478 399 aa4.38□□□□□ -1.71
ECHDC1-206ENST00000417628 FCN3O75636 299 aa4.38□□□□□ -1.71
ECHDC1-206ENST00000417628 SLPIP03973 132 aa4.38□□□□□ -1.71
ECHDC1-206ENST00000417628 ZNF728P0DKX0 622 aa4.38□□□□□ -1.71
ECHDC1-206ENST00000417628 CT45A6P0DMU7 189 aa4.38□□□□□ -1.71
ECHDC1-206ENST00000417628 CT45A5P0DMU8 189 aa4.38□□□□□ -1.71
ECHDC1-206ENST00000417628 CT45A7P0DMV0 189 aa4.38□□□□□ -1.71
ECHDC1-206ENST00000417628 BCL2P10415 239 aa4.38□□□□□ -1.71
ECHDC1-206ENST00000417628 COX5AP20674 150 aa4.38□□□□□ -1.71
ECHDC1-206ENST00000417628 FCGR2CP31995 323 aa4.38□□□□□ -1.71
ECHDC1-206ENST00000417628 PPP1CCP36873 323 aaKnown RBP4.38□□□□□ -1.71
ECHDC1-206ENST00000417628 CAMPP49913 170 aa4.38□□□□□ -1.71
ECHDC1-206ENST00000417628 PPP1CBP62140 327 aa4.38□□□□□ -1.71
ECHDC1-206ENST00000417628 FMODQ06828 376 aa4.38□□□□□ -1.71
ECHDC1-206ENST00000417628 TNXAQ16473 311 aa4.38□□□□□ -1.71
ECHDC1-206ENST00000417628 DEFB112Q30KQ8 113 aa4.38□□□□□ -1.71
ECHDC1-206ENST00000417628 CT45A1Q5HYN5 189 aa4.38□□□□□ -1.71
ECHDC1-206ENST00000417628 STUMQ69YW2 141 aa4.38□□□□□ -1.71
ECHDC1-206ENST00000417628 ARL9Q6T311 187 aa4.38□□□□□ -1.71
ECHDC1-206ENST00000417628 Q6ZSV7 163 aa4.38□□□□□ -1.71
ECHDC1-206ENST00000417628 C16orf82Q7Z2V1 217 aa4.38□□□□□ -1.71
ECHDC1-206ENST00000417628 ERASQ7Z444 233 aa4.38□□□□□ -1.71
ECHDC1-206ENST00000417628 PPP1R27Q86WC6 154 aa4.38□□□□□ -1.71
ECHDC1-206ENST00000417628 PRR22Q8IZ63 422 aa4.38□□□□□ -1.71
ECHDC1-206ENST00000417628 GCSAMQ8N6F7 178 aa4.38□□□□□ -1.71
ECHDC1-206ENST00000417628 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.38□□□□□ -1.71
ECHDC1-206ENST00000417628 OR51A4Q8NGJ6 313 aa4.38□□□□□ -1.71
ECHDC1-206ENST00000417628 OR6N2Q8NGY6 317 aa4.38□□□□□ -1.71
ECHDC1-206ENST00000417628 CT45A3Q8NHU0 189 aa4.38□□□□□ -1.71
ECHDC1-206ENST00000417628 ZNF563Q8TA94 476 aa4.38□□□□□ -1.71
ECHDC1-206ENST00000417628 ZNF502Q8TBZ5 544 aa4.38□□□□□ -1.71
ECHDC1-206ENST00000417628 TMEM54Q969K7 222 aa4.38□□□□□ -1.71
ECHDC1-206ENST00000417628 WDR34Q96EX3 536 aa4.38□□□□□ -1.71
ECHDC1-206ENST00000417628 MAP1LC3CQ9BXW4 147 aa4.38□□□□□ -1.71
ECHDC1-206ENST00000417628 MRPL32Q9BYC8 188 aaKnown RBP4.38□□□□□ -1.71
ECHDC1-206ENST00000417628 COMMD5Q9GZQ3 224 aa4.38□□□□□ -1.71
ECHDC1-206ENST00000417628 CST11Q9H112 138 aa4.38□□□□□ -1.71
ECHDC1-206ENST00000417628 MS4A6AQ9H2W1 248 aa4.38□□□□□ -1.71
ECHDC1-206ENST00000417628 RERGLQ9H628 205 aa4.38□□□□□ -1.71
ECHDC1-206ENST00000417628 MANBALQ9NQG1 85 aa4.38□□□□□ -1.71
ECHDC1-206ENST00000417628 ANAPC10Q9UM13 185 aa4.38□□□□□ -1.71
ECHDC1-206ENST00000417628 VDAC3Q9Y277 283 aa4.38□□□□□ -1.71
ECHDC1-206ENST00000417628 ZNF443Q9Y2A4 671 aaPredicted RBP4.38□□□□□ -1.71
ECHDC1-206ENST00000417628 NSG2Q9Y328 171 aa4.38□□□□□ -1.71
ECHDC1-206ENST00000417628 MED31Q9Y3C7 131 aa4.38□□□□□ -1.71
ECHDC1-206ENST00000417628 SOX21Q9Y651 276 aaPredicted RBP4.38□□□□□ -1.71
ECHDC1-206ENST00000417628 ZNF780BQ9Y6R6 833 aa4.38□□□□□ -1.71
ECHDC1-206ENST00000417628 ARFGEF3Q5TH69 2177 aa4.38□□□□□ -1.71
ECHDC1-206ENST00000417628 DNAH7Q8WXX0 4024 aa4.37□□□□□ -1.71
ECHDC1-206ENST00000417628 TRAV36DV7A0A075B6V5 113 aa4.37□□□□□ -1.71
ECHDC1-206ENST00000417628 IGHV3OR16-10A0A075B7F0 116 aa4.37□□□□□ -1.71
ECHDC1-206ENST00000417628 TRBV4-1A0A0J9YWV2 114 aa4.37□□□□□ -1.71
ECHDC1-206ENST00000417628 C7orf71A4D174 169 aa4.37□□□□□ -1.71
ECHDC1-206ENST00000417628 SYNGR1O43759 233 aa4.37□□□□□ -1.71
ECHDC1-206ENST00000417628 LDB3O75112 727 aa4.37□□□□□ -1.71
ECHDC1-206ENST00000417628 PITX3O75364 302 aa4.37□□□□□ -1.71
ECHDC1-206ENST00000417628 DHRS3O75911 302 aa4.37□□□□□ -1.71
ECHDC1-206ENST00000417628 KBTBD11O94819 623 aa4.37□□□□□ -1.71
ECHDC1-206ENST00000417628 APOA2P02652 100 aa4.37□□□□□ -1.71
ECHDC1-206ENST00000417628 CD3DP04234 171 aa4.37□□□□□ -1.71
ECHDC1-206ENST00000417628 GPX1P07203 203 aa4.37□□□□□ -1.71
ECHDC1-206ENST00000417628 IGHV4-38-2P0DP08 117 aa4.37□□□□□ -1.71
ECHDC1-206ENST00000417628 IGHV1-2P23083 117 aa4.37□□□□□ -1.71
ECHDC1-206ENST00000417628 EDNRAP25101 427 aa4.37□□□□□ -1.71
ECHDC1-206ENST00000417628 CRYBB3P26998 211 aa4.37□□□□□ -1.71
ECHDC1-206ENST00000417628 HOXD3P31249 432 aaPredicted RBP4.37□□□□□ -1.71
ECHDC1-206ENST00000417628 TIA1P31483 386 aaKnown RBP eCLIP4.37□□□□□ -1.71
ECHDC1-206ENST00000417628 DSCR4P56555 118 aaPredicted RBP4.37□□□□□ -1.71
ECHDC1-206ENST00000417628 NSUN5P1Q3KNT7 163 aa4.37□□□□□ -1.71
ECHDC1-206ENST00000417628 SLC25A34Q6PIV7 304 aa4.37□□□□□ -1.71
ECHDC1-206ENST00000417628 RBPMS2Q6ZRY4 209 aaKnown RBP4.37□□□□□ -1.71
ECHDC1-206ENST00000417628 FAM219AQ8IW50 185 aa4.37□□□□□ -1.71
ECHDC1-206ENST00000417628 SGPP2Q8IWX5 399 aa4.37□□□□□ -1.71
ECHDC1-206ENST00000417628 TEX45Q8NA69 505 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms