RNA–Protein interactions for RNA: ENST00000417508.1

VPS16-204, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-204ENST00000417508 MIFP14174 115 aa13.42□□□□□ -0.26
VPS16-204ENST00000417508 NANOS2P60321 138 aaKnown RBP13.42□□□□□ -0.26
VPS16-204ENST00000417508 PYDC2Q56P42 97 aa13.42□□□□□ -0.26
VPS16-204ENST00000417508 ACTL10Q5JWF8 245 aa13.42□□□□□ -0.26
VPS16-204ENST00000417508 LGALS9CQ6DKI2 356 aa13.42□□□□□ -0.26
VPS16-204ENST00000417508 LRTM2Q8N967 370 aa13.42□□□□□ -0.26
VPS16-204ENST00000417508 RAB40CQ96S21 281 aa13.42□□□□□ -0.26
VPS16-204ENST00000417508 NRN1Q9NPD7 142 aa13.42□□□□□ -0.26
VPS16-204ENST00000417508 ALMS1Q8TCU4 4167 aa13.42□□□□□ -0.26
VPS16-204ENST00000417508 KNCNA6PVL3 124 aa13.41□□□□□ -0.26
VPS16-204ENST00000417508 PITX3O75364 302 aa13.41□□□□□ -0.26
VPS16-204ENST00000417508 S100A5P33763 92 aa13.41□□□□□ -0.26
VPS16-204ENST00000417508 NUTF2P61970 127 aaKnown RBP13.41□□□□□ -0.26
VPS16-204ENST00000417508 OR8G2PQ6IF36 304 aa13.41□□□□□ -0.26
VPS16-204ENST00000417508 SIGLEC15Q6ZMC9 328 aa13.41□□□□□ -0.26
VPS16-204ENST00000417508 FBXL17Q9UF56 701 aa13.41□□□□□ -0.26
VPS16-204ENST00000417508 EPPK1P58107 5090 aaKnown RBP13.4□□□□□ -0.26
VPS16-204ENST00000417508 ZNF705EA8MWA4 302 aaPredicted RBP13.4□□□□□ -0.26
VPS16-204ENST00000417508 C11orf94C9JXX5 98 aa13.4□□□□□ -0.26
VPS16-204ENST00000417508 FAM90A26D6RGX4 464 aa13.4□□□□□ -0.26
VPS16-204ENST00000417508 MED6O75586 246 aa13.4□□□□□ -0.26
VPS16-204ENST00000417508 RAB11AP62491 216 aa13.4□□□□□ -0.26
VPS16-204ENST00000417508 GAMTQ14353 236 aa13.4□□□□□ -0.26
VPS16-204ENST00000417508 PSMG4Q5JS54 123 aa13.4□□□□□ -0.26
VPS16-204ENST00000417508 Q8NAQ8 132 aa13.4□□□□□ -0.26
VPS16-204ENST00000417508 TRIM63Q969Q1 353 aa13.4□□□□□ -0.26
VPS16-204ENST00000417508 RNF125Q96EQ8 232 aa13.4□□□□□ -0.26
VPS16-204ENST00000417508 SLC35E1Q96K37 410 aa13.4□□□□□ -0.26
VPS16-204ENST00000417508 C1QTNF4Q9BXJ3 329 aa13.4□□□□□ -0.26
VPS16-204ENST00000417508 ZFP92A6NM28 416 aa13.39□□□□□ -0.27
VPS16-204ENST00000417508 TMED4Q7Z7H5 227 aa13.39□□□□□ -0.27
VPS16-204ENST00000417508 C2CD4CQ8TF44 421 aa13.39□□□□□ -0.27
VPS16-204ENST00000417508 SNRPGP15A8MWD9 76 aa13.38□□□□□ -0.27
VPS16-204ENST00000417508 DEFB4AO15263 64 aa13.38□□□□□ -0.27
VPS16-204ENST00000417508 RPP30P78346 268 aaKnown RBP13.38□□□□□ -0.27
VPS16-204ENST00000417508 C1orf194Q5T5A4 169 aa13.38□□□□□ -0.27
VPS16-204ENST00000417508 CENPSQ8N2Z9 138 aa13.38□□□□□ -0.27
VPS16-204ENST00000417508 CSNK1G2-AS1Q8NCQ2 148 aa13.38□□□□□ -0.27
VPS16-204ENST00000417508 CIB3Q96Q77 187 aaPredicted RBP13.38□□□□□ -0.27
VPS16-204ENST00000417508 TMED3Q9Y3Q3 217 aa13.38□□□□□ -0.27
VPS16-204ENST00000417508 IGHV4-28A0A0C4DH34 117 aa13.37□□□□□ -0.27
VPS16-204ENST00000417508 VAMP1P23763 118 aa13.37□□□□□ -0.27
VPS16-204ENST00000417508 NKX2-1P43699 371 aaPredicted RBP13.37□□□□□ -0.27
VPS16-204ENST00000417508 TRGV9Q99603 122 aa13.37□□□□□ -0.27
VPS16-204ENST00000417508 TBC1D24Q9ULP9 559 aa13.37□□□□□ -0.27
VPS16-204ENST00000417508 V9GYH0 126 aa13.37□□□□□ -0.27
VPS16-204ENST00000417508 BIRC6Q9NR09 4857 aa13.36□□□□□ -0.27
VPS16-204ENST00000417508 IGKV1D-37A0A075B6S9 117 aa13.36□□□□□ -0.27
VPS16-204ENST00000417508 H3BMM0 161 aa13.36□□□□□ -0.27
VPS16-204ENST00000417508 SFT2D2O95562 160 aa13.36□□□□□ -0.27
VPS16-204ENST00000417508 CFDP00746 253 aaPredicted RBP13.36□□□□□ -0.27
VPS16-204ENST00000417508 RBMY1A1P0DJD3 496 aaKnown RBP13.36□□□□□ -0.27
VPS16-204ENST00000417508 RBMY1CP0DJD4 496 aa13.36□□□□□ -0.27
VPS16-204ENST00000417508 C4BPBP20851 252 aa13.36□□□□□ -0.27
VPS16-204ENST00000417508 ID1P41134 155 aa13.36□□□□□ -0.27
VPS16-204ENST00000417508 RBMY1FQ15415 496 aaKnown RBP13.36□□□□□ -0.27
VPS16-204ENST00000417508 PBDC1Q9BVG4 233 aa13.36□□□□□ -0.27
VPS16-204ENST00000417508 X6R8D5 127 aa13.36□□□□□ -0.27
VPS16-204ENST00000417508 CCDC160A6NGH7 325 aa13.35□□□□□ -0.27
VPS16-204ENST00000417508 UBE2MP61081 183 aaKnown RBP13.35□□□□□ -0.27
VPS16-204ENST00000417508 ZNF90Q03938 601 aa13.35□□□□□ -0.27
VPS16-204ENST00000417508 ZNF79Q15937 498 aa13.35□□□□□ -0.27
VPS16-204ENST00000417508 CCDC190Q86UF4 302 aa13.35□□□□□ -0.27
VPS16-204ENST00000417508 SYNGR2O43760 224 aa13.34□□□□□ -0.27
VPS16-204ENST00000417508 HLA-DRB4P13762 266 aa13.34□□□□□ -0.27
VPS16-204ENST00000417508 SPANXN2Q5MJ10 180 aa13.34□□□□□ -0.27
VPS16-204ENST00000417508 SAMD13Q5VXD3 122 aa13.34□□□□□ -0.27
VPS16-204ENST00000417508 GGNBP1Q5YKI7 109 aa13.34□□□□□ -0.27
VPS16-204ENST00000417508 THAP8Q8NA92 274 aa13.34□□□□□ -0.27
VPS16-204ENST00000417508 CLUHP3Q96NS8 147 aa13.34□□□□□ -0.27
VPS16-204ENST00000417508 CLEC5AQ9NY25 188 aa13.34□□□□□ -0.27
VPS16-204ENST00000417508 HLA-DRB4X5D2U9 266 aa13.34□□□□□ -0.27
VPS16-204ENST00000417508 ZNF701M0R085 212 aaPredicted RBP13.33□□□□□ -0.28
VPS16-204ENST00000417508 PPP1R1AQ13522 171 aa13.33□□□□□ -0.28
VPS16-204ENST00000417508 SPATA31B1PQ5VZV4 182 aa13.33□□□□□ -0.28
VPS16-204ENST00000417508 TRAV10A0A0B4J240 114 aa13.32□□□□□ -0.28
VPS16-204ENST00000417508 NAP1L6A6NFF2 107 aa13.32□□□□□ -0.28
VPS16-204ENST00000417508 IAPPP10997 89 aa13.32□□□□□ -0.28
VPS16-204ENST00000417508 HLA-DMBP28068 263 aa13.32□□□□□ -0.28
VPS16-204ENST00000417508 S100A7P31151 101 aa13.32□□□□□ -0.28
VPS16-204ENST00000417508 PSMB3P49720 205 aa13.32□□□□□ -0.28
VPS16-204ENST00000417508 LYZP61626 148 aa13.32□□□□□ -0.28
VPS16-204ENST00000417508 OR8I2Q8N0Y5 310 aa13.32□□□□□ -0.28
VPS16-204ENST00000417508 PPP1R14BQ96C90 147 aa13.32□□□□□ -0.28
VPS16-204ENST00000417508 XCL2Q9UBD3 114 aa13.32□□□□□ -0.28
VPS16-204ENST00000417508 PAIP2BQ9ULR5 123 aaKnown RBP13.32□□□□□ -0.28
VPS16-204ENST00000417508 SLC45A2Q9UMX9 530 aa13.32□□□□□ -0.28
VPS16-204ENST00000417508 ELOA3CA0A087WX78 387 aaPredicted RBP13.31□□□□□ -0.28
VPS16-204ENST00000417508 IGLL5B9A064 214 aa13.31□□□□□ -0.28
VPS16-204ENST00000417508 FOXI2Q6ZQN5 318 aa13.31□□□□□ -0.28
VPS16-204ENST00000417508 RPP25LQ8N5L8 163 aaKnown RBP13.31□□□□□ -0.28
VPS16-204ENST00000417508 NEU1Q99519 415 aa13.31□□□□□ -0.28
VPS16-204ENST00000417508 SAV1Q9H4B6 383 aaPredicted RBP13.31□□□□□ -0.28
VPS16-204ENST00000417508 APLNQ9ULZ1 77 aa13.31□□□□□ -0.28
VPS16-204ENST00000417508 IGKV1OR2-108A0A075B7D4 117 aa13.3□□□□□ -0.28
VPS16-204ENST00000417508 SMIM9A6NGZ8 99 aa13.3□□□□□ -0.28
VPS16-204ENST00000417508 WRBO00258 174 aa13.3□□□□□ -0.28
VPS16-204ENST00000417508 ISLRO14498 428 aa13.3□□□□□ -0.28
VPS16-204ENST00000417508 HOXB5P09067 269 aa13.3□□□□□ -0.28
VPS16-204ENST00000417508 MEOX2P50222 304 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms