RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 DEFB125Q8N687 156 aa13.38□□□□□ -0.27
VCP-202ENST00000417448 NUPR2A6NF83 97 aa13.37□□□□□ -0.27
VCP-202ENST00000417448 PRSS46E5RG02 174 aa13.37□□□□□ -0.27
VCP-202ENST00000417448 PTTG1O95997 202 aa13.37□□□□□ -0.27
VCP-202ENST00000417448 APOHP02749 345 aaPredicted RBP13.37□□□□□ -0.27
VCP-202ENST00000417448 CD7P09564 240 aa13.37□□□□□ -0.27
VCP-202ENST00000417448 IL15RAQ13261 267 aa13.37□□□□□ -0.27
VCP-202ENST00000417448 ETFRF1Q6IPR1 90 aa13.37□□□□□ -0.27
VCP-202ENST00000417448 ZNF600Q6ZNG1 722 aa13.37□□□□□ -0.27
VCP-202ENST00000417448 TMEM116Q8NCL8 245 aa13.37□□□□□ -0.27
VCP-202ENST00000417448 NEURL2Q9BR09 285 aa13.37□□□□□ -0.27
VCP-202ENST00000417448 ZFAND3Q9H8U3 227 aa13.37□□□□□ -0.27
VCP-202ENST00000417448 SIGLEC8Q9NYZ4 499 aa13.37□□□□□ -0.27
VCP-202ENST00000417448 DNAH6Q9C0G6 4158 aa13.36□□□□□ -0.27
VCP-202ENST00000417448 ZNF785A8K8V0 405 aa13.36□□□□□ -0.27
VCP-202ENST00000417448 PMS2P5A8MQ11 134 aa13.36□□□□□ -0.27
VCP-202ENST00000417448 SCAF4O95104 1147 aaKnown RBP13.36□□□□□ -0.27
VCP-202ENST00000417448 C8orf88P0DMB2 117 aa13.36□□□□□ -0.27
VCP-202ENST00000417448 GPX4P36969 197 aaPredicted RBP13.36□□□□□ -0.27
VCP-202ENST00000417448 RRAS2P62070 204 aaPredicted RBP13.36□□□□□ -0.27
VCP-202ENST00000417448 RPP30P78346 268 aaKnown RBP13.36□□□□□ -0.27
VCP-202ENST00000417448 ARL16Q0P5N6 197 aa13.36□□□□□ -0.27
VCP-202ENST00000417448 GUCA2BQ16661 112 aa13.36□□□□□ -0.27
VCP-202ENST00000417448 SLC35E1Q96K37 410 aa13.36□□□□□ -0.27
VCP-202ENST00000417448 DAZ1Q9NQZ3 744 aaKnown RBP13.36□□□□□ -0.27
VCP-202ENST00000417448 FAT2Q9NYQ8 4349 aa13.35□□□□□ -0.27
VCP-202ENST00000417448 IGKV1D-37A0A075B6S9 117 aa13.35□□□□□ -0.27
VCP-202ENST00000417448 FAM24AA6NFZ4 105 aa13.35□□□□□ -0.27
VCP-202ENST00000417448 L7N2F9 121 aa13.35□□□□□ -0.27
VCP-202ENST00000417448 ELLP55199 621 aaPredicted RBP13.35□□□□□ -0.27
VCP-202ENST00000417448 ATP5IP56385 69 aaPredicted RBP13.35□□□□□ -0.27
VCP-202ENST00000417448 H2BFSP57053 126 aa13.35□□□□□ -0.27
VCP-202ENST00000417448 VAMP2P63027 116 aa13.35□□□□□ -0.27
VCP-202ENST00000417448 ZNF90Q03938 601 aa13.35□□□□□ -0.27
VCP-202ENST00000417448 OR2F1Q13607 317 aa13.35□□□□□ -0.27
VCP-202ENST00000417448 CEMP1Q6PRD7 247 aaPredicted RBP13.35□□□□□ -0.27
VCP-202ENST00000417448 TMEM61Q8N0U2 210 aa13.35□□□□□ -0.27
VCP-202ENST00000417448 LILRB2Q8N423 598 aa13.35□□□□□ -0.27
VCP-202ENST00000417448 OR1S2Q8NGQ3 325 aa13.35□□□□□ -0.27
VCP-202ENST00000417448 RAB40CQ96S21 281 aa13.35□□□□□ -0.27
VCP-202ENST00000417448 C11orf1Q9H5F2 150 aa13.35□□□□□ -0.27
VCP-202ENST00000417448 SRD5A3Q9H8P0 318 aa13.35□□□□□ -0.27
VCP-202ENST00000417448 MRPL27Q9P0M9 148 aaKnown RBP13.35□□□□□ -0.27
VCP-202ENST00000417448 MGAT4CQ9UBM8 478 aa13.35□□□□□ -0.27
VCP-202ENST00000417448 IGKV1OR2-108A0A075B7D4 117 aa13.34□□□□□ -0.27
VCP-202ENST00000417448 IGHV7-4-1A0A0J9YVY3 117 aa13.34□□□□□ -0.27
VCP-202ENST00000417448 SMCO3A2RU48 225 aa13.34□□□□□ -0.27
VCP-202ENST00000417448 BCAP31P51572 246 aa13.34□□□□□ -0.27
VCP-202ENST00000417448 LRRC37A5PQ49AS3 106 aa13.34□□□□□ -0.27
VCP-202ENST00000417448 TMEM14EPQ6UXP3 125 aa13.34□□□□□ -0.27
VCP-202ENST00000417448 ACOT7LQ6ZUV0 252 aa13.34□□□□□ -0.27
VCP-202ENST00000417448 OVOL2Q9BRP0 275 aa13.34□□□□□ -0.27
VCP-202ENST00000417448 SMPXQ9UHP9 88 aa13.34□□□□□ -0.27
VCP-202ENST00000417448 IGKV3-7A0A075B6H7 116 aa13.33□□□□□ -0.28
VCP-202ENST00000417448 TRAV30A0A087WSZ9 112 aa13.33□□□□□ -0.28
VCP-202ENST00000417448 TRAV14DV4A0A0A6YYC5 116 aa13.33□□□□□ -0.28
VCP-202ENST00000417448 ZFP92A6NM28 416 aa13.33□□□□□ -0.28
VCP-202ENST00000417448 K7EMT4 169 aa13.33□□□□□ -0.28
VCP-202ENST00000417448 CHEK1O14757 476 aa13.33□□□□□ -0.28
VCP-202ENST00000417448 ST8SIA2Q92186 375 aa13.33□□□□□ -0.28
VCP-202ENST00000417448 RNF2Q99496 336 aa13.33□□□□□ -0.28
VCP-202ENST00000417448 RHPN1-AS1Q9BWJ2 59 aa13.33□□□□□ -0.28
VCP-202ENST00000417448 TECRQ9NZ01 308 aaKnown RBP13.33□□□□□ -0.28
VCP-202ENST00000417448 DNAH2Q9P225 4427 aa13.33□□□□□ -0.28
VCP-202ENST00000417448 CST7O76096 145 aa13.32□□□□□ -0.28
VCP-202ENST00000417448 PSG1P11464 419 aa13.32□□□□□ -0.28
VCP-202ENST00000417448 GATA2P23769 480 aaPredicted RBP13.32□□□□□ -0.28
VCP-202ENST00000417448 CAV2P51636 162 aa13.32□□□□□ -0.28
VCP-202ENST00000417448 YPEL3P61236 119 aaPredicted RBP13.32□□□□□ -0.28
VCP-202ENST00000417448 RGS21Q2M5E4 152 aa13.32□□□□□ -0.28
VCP-202ENST00000417448 Q8WTZ3 238 aa13.32□□□□□ -0.28
VCP-202ENST00000417448 MARC2Q969Z3 335 aa13.32□□□□□ -0.28
VCP-202ENST00000417448 A0A0J9YWU9 116 aa13.31□□□□□ -0.28
VCP-202ENST00000417448 OR11H12B2RN74 326 aa13.31□□□□□ -0.28
VCP-202ENST00000417448 H0YIZ8 118 aa13.31□□□□□ -0.28
VCP-202ENST00000417448 TSC22D2O75157 780 aa13.31□□□□□ -0.28
VCP-202ENST00000417448 IL4P05112 153 aa13.31□□□□□ -0.28
VCP-202ENST00000417448 RD3LP0DJH9 198 aa13.31□□□□□ -0.28
VCP-202ENST00000417448 CXCL3P19876 107 aa13.31□□□□□ -0.28
VCP-202ENST00000417448 TAS2R30P59541 319 aa13.31□□□□□ -0.28
VCP-202ENST00000417448 AKR1C1Q04828 323 aa13.31□□□□□ -0.28
VCP-202ENST00000417448 USF2Q15853 346 aaPredicted RBP13.31□□□□□ -0.28
VCP-202ENST00000417448 TMEM182Q6ZP80 229 aaPredicted RBP13.31□□□□□ -0.28
VCP-202ENST00000417448 OR51G1Q8NGK1 321 aa13.31□□□□□ -0.28
VCP-202ENST00000417448 OR5AC2Q9NZP5 309 aa13.31□□□□□ -0.28
VCP-202ENST00000417448 IGSF23A1L1A6 192 aa13.3□□□□□ -0.28
VCP-202ENST00000417448 TOMM40O96008 361 aa13.3□□□□□ -0.28
VCP-202ENST00000417448 TFPI2P48307 235 aa13.3□□□□□ -0.28
VCP-202ENST00000417448 FCN2Q15485 313 aa13.3□□□□□ -0.28
VCP-202ENST00000417448 LGALS9CQ6DKI2 356 aa13.3□□□□□ -0.28
VCP-202ENST00000417448 RBPMS2Q6ZRY4 209 aaKnown RBP13.3□□□□□ -0.28
VCP-202ENST00000417448 GBGT1Q8N5D6 347 aa13.3□□□□□ -0.28
VCP-202ENST00000417448 TMEM217Q8N7C4 229 aa13.3□□□□□ -0.28
VCP-202ENST00000417448 OR2K2Q8NGT1 345 aa13.3□□□□□ -0.28
VCP-202ENST00000417448 GINS3Q9BRX5 216 aa13.3□□□□□ -0.28
VCP-202ENST00000417448 PBDC1Q9BVG4 233 aa13.3□□□□□ -0.28
VCP-202ENST00000417448 SCGB2A1O75556 95 aa13.29□□□□□ -0.28
VCP-202ENST00000417448 NPPCP23582 126 aa13.29□□□□□ -0.28
VCP-202ENST00000417448 THAP8Q8NA92 274 aa13.29□□□□□ -0.28
VCP-202ENST00000417448 OR10P1Q8NGE3 313 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms