RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 OR5AL1P0C617 328 aa11.97□□□□□ -0.49
NCKIPSD-204ENST00000416649 CHCHD1Q96BP2 118 aaKnown RBP11.97□□□□□ -0.49
NCKIPSD-204ENST00000416649 TEX48A0A1B0GUV7 120 aa11.97□□□□□ -0.49
NCKIPSD-204ENST00000416649 PEX7O00628 323 aa11.97□□□□□ -0.49
NCKIPSD-204ENST00000416649 IGHV3-48P01763 117 aa11.97□□□□□ -0.49
NCKIPSD-204ENST00000416649 NPFFR1Q9GZQ6 430 aa11.97□□□□□ -0.49
NCKIPSD-204ENST00000416649 HSPB8Q9UJY1 196 aa11.97□□□□□ -0.49
NCKIPSD-204ENST00000416649 NCR2O95944 276 aa11.97□□□□□ -0.49
NCKIPSD-204ENST00000416649 REG1BP48304 166 aa11.97□□□□□ -0.49
NCKIPSD-204ENST00000416649 MDP1Q86V88 176 aa11.97□□□□□ -0.49
NCKIPSD-204ENST00000416649 OR8A1Q8NGG7 326 aa11.97□□□□□ -0.49
NCKIPSD-204ENST00000416649 BLNKQ8WV28 456 aa11.97□□□□□ -0.49
NCKIPSD-204ENST00000416649 SLC25A33Q9BSK2 321 aa11.97□□□□□ -0.49
NCKIPSD-204ENST00000416649 TTTY12Q9BZ98 90 aa11.97□□□□□ -0.49
NCKIPSD-204ENST00000416649 PLXNB1O43157 2135 aa11.96□□□□□ -0.49
NCKIPSD-204ENST00000416649 H3BRM9 83 aa11.96□□□□□ -0.49
NCKIPSD-204ENST00000416649 SP1P08047 785 aa11.96□□□□□ -0.49
NCKIPSD-204ENST00000416649 WT1P19544 449 aaPredicted RBP11.96□□□□□ -0.49
NCKIPSD-204ENST00000416649 NEGR1Q7Z3B1 354 aa11.96□□□□□ -0.49
NCKIPSD-204ENST00000416649 RELNP78509 3460 aa11.96□□□□□ -0.49
NCKIPSD-204ENST00000416649 NRN1LQ496H8 165 aa11.96□□□□□ -0.5
NCKIPSD-204ENST00000416649 PRSS57Q6UWY2 283 aa11.96□□□□□ -0.5
NCKIPSD-204ENST00000416649 C1RLQ9NZP8 487 aa11.96□□□□□ -0.5
NCKIPSD-204ENST00000416649 SH3BGRL2Q9UJC5 107 aa11.96□□□□□ -0.5
NCKIPSD-204ENST00000416649 BOKQ9UMX3 212 aaPredicted RBP11.96□□□□□ -0.5
NCKIPSD-204ENST00000416649 F11RQ9Y624 299 aaKnown RBP11.96□□□□□ -0.5
NCKIPSD-204ENST00000416649 HSPE1P61604 102 aaKnown RBP11.95□□□□□ -0.5
NCKIPSD-204ENST00000416649 RNFT1Q5M7Z0 435 aa11.95□□□□□ -0.5
NCKIPSD-204ENST00000416649 VSTM2AQ8TAG5 236 aa11.95□□□□□ -0.5
NCKIPSD-204ENST00000416649 PLCE1Q9P212 2302 aa11.95□□□□□ -0.5
NCKIPSD-204ENST00000416649 C15orf61A6NNL5 157 aa11.95□□□□□ -0.5
NCKIPSD-204ENST00000416649 A0A1B0GV72 72 aa11.94□□□□□ -0.5
NCKIPSD-204ENST00000416649 A0A1B0GXF2 115 aa11.94□□□□□ -0.5
NCKIPSD-204ENST00000416649 HOXC12P31275 282 aa11.94□□□□□ -0.5
NCKIPSD-204ENST00000416649 MEOX1P50221 254 aa11.94□□□□□ -0.5
NCKIPSD-204ENST00000416649 FAM231DQ6ZW35 169 aa11.94□□□□□ -0.5
NCKIPSD-204ENST00000416649 SIGMAR1Q99720 223 aa11.94□□□□□ -0.5
NCKIPSD-204ENST00000416649 CHD8Q9HCK8 2581 aa11.94□□□□□ -0.5
NCKIPSD-204ENST00000416649 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.94□□□□□ -0.5
NCKIPSD-204ENST00000416649 SLC25A5P05141 298 aaKnown RBP11.94□□□□□ -0.5
NCKIPSD-204ENST00000416649 TCF15Q12870 199 aa11.94□□□□□ -0.5
NCKIPSD-204ENST00000416649 TMEM177Q53S58 311 aa11.94□□□□□ -0.5
NCKIPSD-204ENST00000416649 ATP5L2Q7Z4Y8 100 aa11.94□□□□□ -0.5
NCKIPSD-204ENST00000416649 FAM173AQ9BQD7 235 aa11.94□□□□□ -0.5
NCKIPSD-204ENST00000416649 PAXXQ9BUH6 204 aa11.94□□□□□ -0.5
NCKIPSD-204ENST00000416649 H3BTX0 84 aa11.93□□□□□ -0.5
NCKIPSD-204ENST00000416649 APOHP02749 345 aaPredicted RBP11.93□□□□□ -0.5
NCKIPSD-204ENST00000416649 LINC00322Q6ZN03 302 aaPredicted RBP11.93□□□□□ -0.5
NCKIPSD-204ENST00000416649 SLC25A2Q9BXI2 301 aa11.93□□□□□ -0.5
NCKIPSD-204ENST00000416649 COX7A2P2O60397 106 aa11.93□□□□□ -0.5
NCKIPSD-204ENST00000416649 P01737 135 aa11.93□□□□□ -0.5
NCKIPSD-204ENST00000416649 FABP2P12104 132 aa11.93□□□□□ -0.5
NCKIPSD-204ENST00000416649 ZNF134P52741 427 aa11.93□□□□□ -0.5
NCKIPSD-204ENST00000416649 UTF1Q5T230 341 aa11.93□□□□□ -0.5
NCKIPSD-204ENST00000416649 ZNF788Q6ZQV5 615 aa11.93□□□□□ -0.5
NCKIPSD-204ENST00000416649 GTSF1Q8WW33 167 aa11.93□□□□□ -0.5
NCKIPSD-204ENST00000416649 DAZAP1Q96EP5 407 aaKnown RBP11.93□□□□□ -0.5
NCKIPSD-204ENST00000416649 ADTRPQ96IZ2 230 aa11.93□□□□□ -0.5
NCKIPSD-204ENST00000416649 TRGV8A0A0C4DH27 118 aa11.93□□□□□ -0.5
NCKIPSD-204ENST00000416649 A0A1W2PPM0 123 aa11.93□□□□□ -0.5
NCKIPSD-204ENST00000416649 NMUP48645 174 aa11.93□□□□□ -0.5
NCKIPSD-204ENST00000416649 FXYD7P58549 80 aa11.93□□□□□ -0.5
NCKIPSD-204ENST00000416649 LINC01545Q5VT33 79 aa11.93□□□□□ -0.5
NCKIPSD-204ENST00000416649 ZNF329Q86UD4 541 aa11.93□□□□□ -0.5
NCKIPSD-204ENST00000416649 WFDC12Q8WWY7 111 aa11.93□□□□□ -0.5
NCKIPSD-204ENST00000416649 LINC00470Q9BZP3 86 aa11.93□□□□□ -0.5
NCKIPSD-204ENST00000416649 RPP21Q9H633 154 aaKnown RBP11.93□□□□□ -0.5
NCKIPSD-204ENST00000416649 TSSC4Q9Y5U2 329 aaPredicted RBP11.93□□□□□ -0.5
NCKIPSD-204ENST00000416649 MED13LQ71F56 2210 aa11.92□□□□□ -0.5
NCKIPSD-204ENST00000416649 TANC2Q9HCD6 1990 aa11.92□□□□□ -0.5
NCKIPSD-204ENST00000416649 A8MWL6 223 aa11.92□□□□□ -0.5
NCKIPSD-204ENST00000416649 APOBEC3AP31941 199 aaPredicted RBP11.92□□□□□ -0.5
NCKIPSD-204ENST00000416649 HSD52Q0P140 79 aa11.92□□□□□ -0.5
NCKIPSD-204ENST00000416649 AP5S1Q9NUS5 200 aa11.92□□□□□ -0.5
NCKIPSD-204ENST00000416649 A1L4Q6 167 aa11.92□□□□□ -0.5
NCKIPSD-204ENST00000416649 FAM90A9PA6NNJ1 464 aa11.92□□□□□ -0.5
NCKIPSD-204ENST00000416649 F2RL2O00254 374 aa11.92□□□□□ -0.5
NCKIPSD-204ENST00000416649 ADH4P08319 380 aa11.92□□□□□ -0.5
NCKIPSD-204ENST00000416649 TBC1D28Q2M2D7 210 aa11.92□□□□□ -0.5
NCKIPSD-204ENST00000416649 ACP7Q6ZNF0 438 aa11.92□□□□□ -0.5
NCKIPSD-204ENST00000416649 FDCSPQ8NFU4 85 aa11.92□□□□□ -0.5
NCKIPSD-204ENST00000416649 PRSS3P2Q8NHM4 247 aa11.92□□□□□ -0.5
NCKIPSD-204ENST00000416649 FAM167A-AS1Q96KT0 104 aa11.92□□□□□ -0.5
NCKIPSD-204ENST00000416649 B4GALT7Q9UBV7 327 aa11.92□□□□□ -0.5
NCKIPSD-204ENST00000416649 ZZEF1O43149 2961 aa11.92□□□□□ -0.5
NCKIPSD-204ENST00000416649 TLN1Q9Y490 2541 aaKnown RBP11.92□□□□□ -0.5
NCKIPSD-204ENST00000416649 NCOR2Q9Y618 2525 aa11.92□□□□□ -0.5
NCKIPSD-204ENST00000416649 C1orf229Q6ZS94 237 aaPredicted RBP11.91□□□□□ -0.5
NCKIPSD-204ENST00000416649 FER1L6-AS2Q96M78 137 aa11.91□□□□□ -0.5
NCKIPSD-204ENST00000416649 TPPP3Q9BW30 176 aa11.91□□□□□ -0.5
NCKIPSD-204ENST00000416649 ATRXP46100 2492 aa11.91□□□□□ -0.5
NCKIPSD-204ENST00000416649 CACNA1BQ00975 2339 aa11.91□□□□□ -0.5
NCKIPSD-204ENST00000416649 LOC389332A0A1B0GUA5 103 aa11.91□□□□□ -0.5
NCKIPSD-204ENST00000416649 DEFB109BQ30KR1 87 aa11.91□□□□□ -0.5
NCKIPSD-204ENST00000416649 ZNF766Q5HY98 468 aa11.91□□□□□ -0.5
NCKIPSD-204ENST00000416649 WDR82Q6UXN9 313 aa11.91□□□□□ -0.5
NCKIPSD-204ENST00000416649 FA2HQ7L5A8 372 aa11.91□□□□□ -0.5
NCKIPSD-204ENST00000416649 PRSS33Q8NF86 280 aa11.91□□□□□ -0.5
NCKIPSD-204ENST00000416649 OR5A1Q8NGJ0 315 aa11.91□□□□□ -0.5
NCKIPSD-204ENST00000416649 ZNF257Q9Y2Q1 563 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms