RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 FAM90A26D6RGX4 464 aa10.97□□□□□ -0.65
UBXN4-203ENST00000416538 BUB3O43684 328 aa10.97□□□□□ -0.65
UBXN4-203ENST00000416538 SCGB2A1O75556 95 aa10.97□□□□□ -0.65
UBXN4-203ENST00000416538 IAPPP10997 89 aa10.97□□□□□ -0.65
UBXN4-203ENST00000416538 SRPXP78539 464 aa10.97□□□□□ -0.65
UBXN4-203ENST00000416538 ZNF90Q03938 601 aa10.97□□□□□ -0.65
UBXN4-203ENST00000416538 DHRS2Q13268 280 aa10.97□□□□□ -0.65
UBXN4-203ENST00000416538 PPP1R1AQ13522 171 aa10.97□□□□□ -0.65
UBXN4-203ENST00000416538 PSMG4Q5JS54 123 aa10.97□□□□□ -0.65
UBXN4-203ENST00000416538 ACTL10Q5JWF8 245 aa10.97□□□□□ -0.65
UBXN4-203ENST00000416538 STHQ8IWL8 128 aa10.97□□□□□ -0.65
UBXN4-203ENST00000416538 TOMM5Q8N4H5 51 aa10.97□□□□□ -0.65
UBXN4-203ENST00000416538 LRTM2Q8N967 370 aa10.97□□□□□ -0.65
UBXN4-203ENST00000416538 OR1S1Q8NH92 325 aa10.97□□□□□ -0.65
UBXN4-203ENST00000416538 U3KQ87 197 aa10.97□□□□□ -0.65
UBXN4-203ENST00000416538 IGKV1OR2-108A0A075B7D4 117 aa10.96□□□□□ -0.65
UBXN4-203ENST00000416538 RBMY1A1P0DJD3 496 aaKnown RBP10.96□□□□□ -0.65
UBXN4-203ENST00000416538 RBMY1CP0DJD4 496 aa10.96□□□□□ -0.65
UBXN4-203ENST00000416538 RD3LP0DJH9 198 aa10.96□□□□□ -0.65
UBXN4-203ENST00000416538 ANXA3P12429 323 aa10.96□□□□□ -0.65
UBXN4-203ENST00000416538 VAMP1P23763 118 aa10.96□□□□□ -0.65
UBXN4-203ENST00000416538 FAUP35544 74 aaKnown RBP10.96□□□□□ -0.65
UBXN4-203ENST00000416538 DEFB1P60022 68 aa10.96□□□□□ -0.65
UBXN4-203ENST00000416538 GAMTQ14353 236 aa10.96□□□□□ -0.65
UBXN4-203ENST00000416538 RBMY1FQ15415 496 aaKnown RBP10.96□□□□□ -0.65
UBXN4-203ENST00000416538 TMEM128Q5BJH2 165 aa10.96□□□□□ -0.65
UBXN4-203ENST00000416538 ETFRF1Q6IPR1 90 aa10.96□□□□□ -0.65
UBXN4-203ENST00000416538 TMEM217Q8N7C4 229 aa10.96□□□□□ -0.65
UBXN4-203ENST00000416538 CSNK1G2-AS1Q8NCQ2 148 aa10.96□□□□□ -0.65
UBXN4-203ENST00000416538 RNF125Q96EQ8 232 aa10.96□□□□□ -0.65
UBXN4-203ENST00000416538 NARS2Q96I59 477 aaKnown RBP10.96□□□□□ -0.65
UBXN4-203ENST00000416538 SRRQ9GZT4 340 aa10.96□□□□□ -0.65
UBXN4-203ENST00000416538 CLEC5AQ9NY25 188 aa10.96□□□□□ -0.65
UBXN4-203ENST00000416538 X6R8D5 127 aa10.96□□□□□ -0.65
UBXN4-203ENST00000416538 IGHV4-28A0A0C4DH34 117 aa10.95□□□□□ -0.66
UBXN4-203ENST00000416538 DUXBA0A1W2PPF3 345 aa10.95□□□□□ -0.66
UBXN4-203ENST00000416538 HELTA6NFD8 242 aa10.95□□□□□ -0.66
UBXN4-203ENST00000416538 PRSS46E5RG02 174 aa10.95□□□□□ -0.66
UBXN4-203ENST00000416538 IFNA4P05014 189 aa10.95□□□□□ -0.66
UBXN4-203ENST00000416538 S100A5P33763 92 aa10.95□□□□□ -0.66
UBXN4-203ENST00000416538 SIGLEC15Q6ZMC9 328 aa10.95□□□□□ -0.66
UBXN4-203ENST00000416538 C11orf45Q8TAV5 145 aa10.95□□□□□ -0.66
UBXN4-203ENST00000416538 SDHCQ99643 169 aaPredicted RBP10.95□□□□□ -0.66
UBXN4-203ENST00000416538 FBXL17Q9UF56 701 aa10.95□□□□□ -0.66
UBXN4-203ENST00000416538 VPS13DQ5THJ4 4388 aa10.94□□□□□ -0.66
UBXN4-203ENST00000416538 DNAH6Q9C0G6 4158 aa10.94□□□□□ -0.66
UBXN4-203ENST00000416538 ZNF705EA8MWA4 302 aaPredicted RBP10.94□□□□□ -0.66
UBXN4-203ENST00000416538 SFT2D2O95562 160 aa10.94□□□□□ -0.66
UBXN4-203ENST00000416538 SPP1P10451 314 aa10.94□□□□□ -0.66
UBXN4-203ENST00000416538 AP3S2P59780 193 aa10.94□□□□□ -0.66
UBXN4-203ENST00000416538 GDF5OSQ5U4N7 250 aa10.94□□□□□ -0.66
UBXN4-203ENST00000416538 NOXA1Q86UR1 476 aa10.94□□□□□ -0.66
UBXN4-203ENST00000416538 RPP25LQ8N5L8 163 aaKnown RBP10.94□□□□□ -0.66
UBXN4-203ENST00000416538 RAB40CQ96S21 281 aa10.94□□□□□ -0.66
UBXN4-203ENST00000416538 PBDC1Q9BVG4 233 aa10.94□□□□□ -0.66
UBXN4-203ENST00000416538 WDR12Q9GZL7 423 aaKnown RBP10.94□□□□□ -0.66
UBXN4-203ENST00000416538 MAGT1Q9H0U3 335 aa10.94□□□□□ -0.66
UBXN4-203ENST00000416538 NRN1Q9NPD7 142 aa10.94□□□□□ -0.66
UBXN4-203ENST00000416538 CACFD1Q9UGQ2 172 aa10.94□□□□□ -0.66
UBXN4-203ENST00000416538 KLK5Q9Y337 293 aaPredicted RBP10.94□□□□□ -0.66
UBXN4-203ENST00000416538 ELOA3CA0A087WX78 387 aaPredicted RBP10.93□□□□□ -0.66
UBXN4-203ENST00000416538 ZFP92A6NM28 416 aa10.93□□□□□ -0.66
UBXN4-203ENST00000416538 SOCS3O14543 225 aa10.93□□□□□ -0.66
UBXN4-203ENST00000416538 DEDDO75618 318 aa10.93□□□□□ -0.66
UBXN4-203ENST00000416538 SLC25A6P12236 298 aa10.93□□□□□ -0.66
UBXN4-203ENST00000416538 EIF2B2P49770 351 aaKnown RBP10.93□□□□□ -0.66
UBXN4-203ENST00000416538 OR2F1Q13607 317 aa10.93□□□□□ -0.66
UBXN4-203ENST00000416538 BAK1Q16611 211 aa10.93□□□□□ -0.66
UBXN4-203ENST00000416538 SLC35E1Q96K37 410 aa10.93□□□□□ -0.66
UBXN4-203ENST00000416538 SLC25A21Q9BQT8 299 aaPredicted RBP10.93□□□□□ -0.66
UBXN4-203ENST00000416538 ZNF701M0R085 212 aaPredicted RBP10.92□□□□□ -0.66
UBXN4-203ENST00000416538 HOXB5P09067 269 aa10.92□□□□□ -0.66
UBXN4-203ENST00000416538 BTCP35070 178 aa10.92□□□□□ -0.66
UBXN4-203ENST00000416538 GPX4P36969 197 aaPredicted RBP10.92□□□□□ -0.66
UBXN4-203ENST00000416538 LYZP61626 148 aa10.92□□□□□ -0.66
UBXN4-203ENST00000416538 GGNBP1Q5YKI7 109 aa10.92□□□□□ -0.66
UBXN4-203ENST00000416538 MORN3Q6PF18 240 aaPredicted RBP10.92□□□□□ -0.66
UBXN4-203ENST00000416538 CENPSQ8N2Z9 138 aa10.92□□□□□ -0.66
UBXN4-203ENST00000416538 THAP8Q8NA92 274 aa10.92□□□□□ -0.66
UBXN4-203ENST00000416538 CELA1Q9UNI1 258 aa10.92□□□□□ -0.66
UBXN4-203ENST00000416538 FLVCR2Q9UPI3 526 aa10.92□□□□□ -0.66
UBXN4-203ENST00000416538 H3BMM0 161 aa10.91□□□□□ -0.66
UBXN4-203ENST00000416538 H3BP45 60 aa10.91□□□□□ -0.66
UBXN4-203ENST00000416538 ADAP1O75689 374 aa10.91□□□□□ -0.66
UBXN4-203ENST00000416538 OR8G2PQ6IF36 304 aa10.91□□□□□ -0.66
UBXN4-203ENST00000416538 DEDD2Q8WXF8 326 aa10.91□□□□□ -0.66
UBXN4-203ENST00000416538 C17orf77Q96MU5 243 aa10.91□□□□□ -0.66
UBXN4-203ENST00000416538 TRGV9Q99603 122 aa10.91□□□□□ -0.66
UBXN4-203ENST00000416538 DNAH10Q8IVF4 4471 aa10.9□□□□□ -0.66
UBXN4-203ENST00000416538 WRBO00258 174 aa10.9□□□□□ -0.66
UBXN4-203ENST00000416538 HLA-DRB4P13762 266 aa10.9□□□□□ -0.66
UBXN4-203ENST00000416538 AP2S1P53680 142 aaPredicted RBP10.9□□□□□ -0.66
UBXN4-203ENST00000416538 ATP5IP56385 69 aaPredicted RBP10.9□□□□□ -0.66
UBXN4-203ENST00000416538 TMEM182Q6ZP80 229 aaPredicted RBP10.9□□□□□ -0.66
UBXN4-203ENST00000416538 MFFQ9GZY8 342 aa10.9□□□□□ -0.66
UBXN4-203ENST00000416538 XCL2Q9UBD3 114 aa10.9□□□□□ -0.66
UBXN4-203ENST00000416538 PAIP2BQ9ULR5 123 aaKnown RBP10.9□□□□□ -0.66
UBXN4-203ENST00000416538 TMED3Q9Y3Q3 217 aa10.9□□□□□ -0.66
UBXN4-203ENST00000416538 HLA-DRB4X5D2U9 266 aa10.9□□□□□ -0.66
UBXN4-203ENST00000416538 PIGBOS1A0A0B4J2F0 54 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 115.9 ms