RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 PCBD1P61457 104 aa1.85□□□□□ -2.11
HMGB1P11-201ENST00000413899 TSPAN5P62079 268 aa1.85□□□□□ -2.11
HMGB1P11-201ENST00000413899 MRPS15P82914 257 aaKnown RBP1.85□□□□□ -2.11
HMGB1P11-201ENST00000413899 ZNF345Q14585 488 aa1.85□□□□□ -2.11
HMGB1P11-201ENST00000413899 HMGN3Q15651 99 aa1.85□□□□□ -2.11
HMGB1P11-201ENST00000413899 GRK1Q15835 563 aa1.85□□□□□ -2.11
HMGB1P11-201ENST00000413899 TAF9Q16594 264 aa1.85□□□□□ -2.11
HMGB1P11-201ENST00000413899 DEFB109BQ30KR1 87 aa1.85□□□□□ -2.11
HMGB1P11-201ENST00000413899 CEACAM21Q3KPI0 293 aa1.85□□□□□ -2.11
HMGB1P11-201ENST00000413899 ACTBL2Q562R1 376 aa1.85□□□□□ -2.11
HMGB1P11-201ENST00000413899 GCSAMLQ5JQS6 135 aa1.85□□□□□ -2.11
HMGB1P11-201ENST00000413899 C6orf183Q5T699 404 aa1.85□□□□□ -2.11
HMGB1P11-201ENST00000413899 STUMQ69YW2 141 aa1.85□□□□□ -2.11
HMGB1P11-201ENST00000413899 LPCAT3Q6P1A2 487 aa1.85□□□□□ -2.11
HMGB1P11-201ENST00000413899 SPINT4Q6UDR6 99 aa1.85□□□□□ -2.11
HMGB1P11-201ENST00000413899 TEX261Q6UWH6 196 aa1.85□□□□□ -2.11
HMGB1P11-201ENST00000413899 Q6ZT83 130 aa1.85□□□□□ -2.11
HMGB1P11-201ENST00000413899 SLC25A26Q70HW3 274 aa1.85□□□□□ -2.11
HMGB1P11-201ENST00000413899 MRPL21Q7Z2W9 205 aaKnown RBP1.85□□□□□ -2.11
HMGB1P11-201ENST00000413899 TMED4Q7Z7H5 227 aa1.85□□□□□ -2.11
HMGB1P11-201ENST00000413899 KCNRGQ8N5I3 272 aa1.85□□□□□ -2.11
HMGB1P11-201ENST00000413899 C12orf45Q8N5I9 185 aaPredicted RBP1.85□□□□□ -2.11
HMGB1P11-201ENST00000413899 ZNF680Q8NEM1 530 aa1.85□□□□□ -2.11
HMGB1P11-201ENST00000413899 SLC30A7Q8NEW0 376 aa1.85□□□□□ -2.11
HMGB1P11-201ENST00000413899 OR5T1Q8NG75 326 aa1.85□□□□□ -2.11
HMGB1P11-201ENST00000413899 OR10W1Q8NGF6 305 aa1.85□□□□□ -2.11
HMGB1P11-201ENST00000413899 OR11L1Q8NGX0 322 aa1.85□□□□□ -2.11
HMGB1P11-201ENST00000413899 OR6K3Q8NGY3 331 aa1.85□□□□□ -2.11
HMGB1P11-201ENST00000413899 OR8S1Q8NH09 359 aa1.85□□□□□ -2.11
HMGB1P11-201ENST00000413899 OR4K15Q8NH41 348 aa1.85□□□□□ -2.11
HMGB1P11-201ENST00000413899 SLC25A40Q8TBP6 338 aa1.85□□□□□ -2.11
HMGB1P11-201ENST00000413899 RPEQ96AT9 228 aa1.85□□□□□ -2.11
HMGB1P11-201ENST00000413899 FAM210AQ96ND0 272 aa1.85□□□□□ -2.11
HMGB1P11-201ENST00000413899 PRRT1Q99946 306 aa1.85□□□□□ -2.11
HMGB1P11-201ENST00000413899 SLC25A21Q9BQT8 299 aaPredicted RBP1.85□□□□□ -2.11
HMGB1P11-201ENST00000413899 FAAP24Q9BTP7 215 aa1.85□□□□□ -2.11
HMGB1P11-201ENST00000413899 C1QTNF6Q9BXI9 259 aa1.85□□□□□ -2.11
HMGB1P11-201ENST00000413899 OR51B6Q9H340 312 aa1.85□□□□□ -2.11
HMGB1P11-201ENST00000413899 OR51I2Q9H344 312 aa1.85□□□□□ -2.11
HMGB1P11-201ENST00000413899 IFT46Q9NQC8 304 aa1.85□□□□□ -2.11
HMGB1P11-201ENST00000413899 ANXA10Q9UJ72 324 aa1.85□□□□□ -2.11
HMGB1P11-201ENST00000413899 PAIP2BQ9ULR5 123 aaKnown RBP1.85□□□□□ -2.11
HMGB1P11-201ENST00000413899 TNFSF18Q9UNG2 199 aa1.85□□□□□ -2.11
HMGB1P11-201ENST00000413899 RCL1Q9Y2P8 373 aaKnown RBP1.85□□□□□ -2.11
HMGB1P11-201ENST00000413899 U3KQ87 197 aa1.85□□□□□ -2.11
HMGB1P11-201ENST00000413899 PTPRQQ9UMZ3 2332 aa1.85□□□□□ -2.11
HMGB1P11-201ENST00000413899 ZFHX4Q86UP3 3567 aa1.85□□□□□ -2.11
HMGB1P11-201ENST00000413899 LOC400499M0QZD8 3231 aa1.84□□□□□ -2.11
HMGB1P11-201ENST00000413899 DCHS1Q96JQ0 3298 aa1.84□□□□□ -2.11
HMGB1P11-201ENST00000413899 IGLV3-9A0A075B6K5 115 aa1.84□□□□□ -2.11
HMGB1P11-201ENST00000413899 LEUTXA8MZ59 168 aa1.84□□□□□ -2.11
HMGB1P11-201ENST00000413899 DISC1C4P0D8 188 aa1.84□□□□□ -2.11
HMGB1P11-201ENST00000413899 ARPC5O15511 151 aa1.84□□□□□ -2.11
HMGB1P11-201ENST00000413899 SSNA1O43805 119 aa1.84□□□□□ -2.11
HMGB1P11-201ENST00000413899 NOS1APO75052 506 aaPredicted RBP1.84□□□□□ -2.11
HMGB1P11-201ENST00000413899 ZNF737O75373 536 aa1.84□□□□□ -2.11
HMGB1P11-201ENST00000413899 FARS2O95363 451 aaKnown RBP1.84□□□□□ -2.11
HMGB1P11-201ENST00000413899 IGKV1-39P01597 117 aa1.84□□□□□ -2.11
HMGB1P11-201ENST00000413899 IGKV1D-39P04432 117 aa1.84□□□□□ -2.11
HMGB1P11-201ENST00000413899 CTSDP07339 412 aaPredicted RBP1.84□□□□□ -2.11
HMGB1P11-201ENST00000413899 SCTP09683 121 aa1.84□□□□□ -2.11
HMGB1P11-201ENST00000413899 CD79AP11912 226 aa1.84□□□□□ -2.11
HMGB1P11-201ENST00000413899 SLC25A4P12235 298 aa1.84□□□□□ -2.11
HMGB1P11-201ENST00000413899 CBR1P16152 277 aa1.84□□□□□ -2.11
HMGB1P11-201ENST00000413899 CD34P28906 385 aa1.84□□□□□ -2.11
HMGB1P11-201ENST00000413899 ARR3P36575 388 aa1.84□□□□□ -2.11
HMGB1P11-201ENST00000413899 CBX5P45973 191 aa1.84□□□□□ -2.11
HMGB1P11-201ENST00000413899 HAAOP46952 286 aa1.84□□□□□ -2.11
HMGB1P11-201ENST00000413899 RBP2P50120 134 aa1.84□□□□□ -2.11
HMGB1P11-201ENST00000413899 GNG3P63215 75 aa1.84□□□□□ -2.11
HMGB1P11-201ENST00000413899 HLA-DRB3P79483 266 aa1.84□□□□□ -2.11
HMGB1P11-201ENST00000413899 SURF2Q15527 256 aaPredicted RBP1.84□□□□□ -2.11
HMGB1P11-201ENST00000413899 SLC9A3R2Q15599 337 aa1.84□□□□□ -2.11
HMGB1P11-201ENST00000413899 TBC1D28Q2M2D7 210 aa1.84□□□□□ -2.11
HMGB1P11-201ENST00000413899 MPV17LQ2QL34 196 aa1.84□□□□□ -2.11
HMGB1P11-201ENST00000413899 SCGB2B2Q4G0G5 96 aa1.84□□□□□ -2.11
HMGB1P11-201ENST00000413899 CLLU1Q5K131 121 aa1.84□□□□□ -2.11
HMGB1P11-201ENST00000413899 FAM74A1Q5RGS3 127 aa1.84□□□□□ -2.11
HMGB1P11-201ENST00000413899 OR2T2Q6IF00 324 aa1.84□□□□□ -2.11
HMGB1P11-201ENST00000413899 HAGHLQ6PII5 290 aaPredicted RBP1.84□□□□□ -2.11
HMGB1P11-201ENST00000413899 CLEC18BQ6UXF7 455 aa1.84□□□□□ -2.11
HMGB1P11-201ENST00000413899 WDR82Q6UXN9 313 aa1.84□□□□□ -2.11
HMGB1P11-201ENST00000413899 ZNF826PQ6ZT77 177 aa1.84□□□□□ -2.11
HMGB1P11-201ENST00000413899 ZNF767PQ75MW2 155 aa1.84□□□□□ -2.11
HMGB1P11-201ENST00000413899 DPPA2Q7Z7J5 298 aa1.84□□□□□ -2.11
HMGB1P11-201ENST00000413899 APRG1Q8IVJ8 170 aa1.84□□□□□ -2.11
HMGB1P11-201ENST00000413899 OR5H2Q8NGV7 314 aa1.84□□□□□ -2.11
HMGB1P11-201ENST00000413899 OR1S1Q8NH92 325 aa1.84□□□□□ -2.11
HMGB1P11-201ENST00000413899 TERB2Q8NHR7 220 aa1.84□□□□□ -2.11
HMGB1P11-201ENST00000413899 STOML3Q8TAV4 291 aa1.84□□□□□ -2.11
HMGB1P11-201ENST00000413899 FAM57AQ8TBR7 257 aa1.84□□□□□ -2.11
HMGB1P11-201ENST00000413899 PPP1R1CQ8WVI7 109 aa1.84□□□□□ -2.11
HMGB1P11-201ENST00000413899 ASB13Q8WXK3 278 aa1.84□□□□□ -2.11
HMGB1P11-201ENST00000413899 MRPS24Q96EL2 167 aaKnown RBP1.84□□□□□ -2.11
HMGB1P11-201ENST00000413899 BORCS8Q96FH0 119 aa1.84□□□□□ -2.11
HMGB1P11-201ENST00000413899 AQP10Q96PS8 301 aa1.84□□□□□ -2.11
HMGB1P11-201ENST00000413899 TP53RKQ96S44 253 aa1.84□□□□□ -2.11
HMGB1P11-201ENST00000413899 GPER1Q99527 375 aa1.84□□□□□ -2.11
HMGB1P11-201ENST00000413899 CMSS1Q9BQ75 279 aaKnown RBP1.84□□□□□ -2.11
HMGB1P11-201ENST00000413899 ADAT1Q9BUB4 502 aaKnown RBP1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms