RNA–Protein interactions for RNA: ENST00000413806.7

SMARCA4-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,512 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-202ENST00000413806 PSMB11A5LHX3 300 aa11.36□□□□□ -0.59
SMARCA4-202ENST00000413806 SRRM5B3KS81 715 aa11.36□□□□□ -0.59
SMARCA4-202ENST00000413806 M0R381 172 aa11.36□□□□□ -0.59
SMARCA4-202ENST00000413806 C9orf153Q5TBE3 101 aa11.36□□□□□ -0.59
SMARCA4-202ENST00000413806 MESP1Q9BRJ9 268 aa11.36□□□□□ -0.59
SMARCA4-202ENST00000413806 YAE1D1Q9NRH1 226 aa11.36□□□□□ -0.59
SMARCA4-202ENST00000413806 S4R3C0 116 aa11.36□□□□□ -0.59
SMARCA4-202ENST00000413806 IGKV3OR2-268A0A0C4DH90 116 aa11.36□□□□□ -0.59
SMARCA4-202ENST00000413806 TDGF1P13385 188 aa11.36□□□□□ -0.59
SMARCA4-202ENST00000413806 RNF125Q96EQ8 232 aa11.36□□□□□ -0.59
SMARCA4-202ENST00000413806 IGHV3OR16-13A0A075B7E8 117 aa11.36□□□□□ -0.59
SMARCA4-202ENST00000413806 IGHV3-74A0A0B4J1X5 117 aa11.36□□□□□ -0.59
SMARCA4-202ENST00000413806 NMSQ5H8A3 153 aa11.36□□□□□ -0.59
SMARCA4-202ENST00000413806 LCN12Q6JVE5 192 aa11.36□□□□□ -0.59
SMARCA4-202ENST00000413806 CLEC19AQ6UXS0 136 aa11.36□□□□□ -0.59
SMARCA4-202ENST00000413806 FOXL2NBQ6ZUU3 175 aa11.36□□□□□ -0.59
SMARCA4-202ENST00000413806 CFPP27918 469 aa11.36□□□□□ -0.59
SMARCA4-202ENST00000413806 Q6ZS49 121 aa11.36□□□□□ -0.59
SMARCA4-202ENST00000413806 VSIRQ9H7M9 311 aa11.36□□□□□ -0.59
SMARCA4-202ENST00000413806 SLC25A15Q9Y619 301 aa11.36□□□□□ -0.59
SMARCA4-202ENST00000413806 IGHV1-46P01743 117 aa11.35□□□□□ -0.59
SMARCA4-202ENST00000413806 TIMP3P35625 211 aa11.35□□□□□ -0.59
SMARCA4-202ENST00000413806 GNG5P63218 68 aa11.35□□□□□ -0.59
SMARCA4-202ENST00000413806 IGHV3-66A0A0C4DH42 116 aa11.35□□□□□ -0.59
SMARCA4-202ENST00000413806 PSG3Q16557 428 aa11.35□□□□□ -0.59
SMARCA4-202ENST00000413806 ATP5L2Q7Z4Y8 100 aa11.35□□□□□ -0.59
SMARCA4-202ENST00000413806 JMJD8Q96S16 334 aa11.35□□□□□ -0.59
SMARCA4-202ENST00000413806 LYL1P12980 280 aa11.35□□□□□ -0.59
SMARCA4-202ENST00000413806 TREML4Q6UXN2 200 aa11.35□□□□□ -0.59
SMARCA4-202ENST00000413806 FAM168AQ92567 244 aa11.35□□□□□ -0.59
SMARCA4-202ENST00000413806 C20orf144Q9BQM9 153 aa11.35□□□□□ -0.59
SMARCA4-202ENST00000413806 FABP5P3A8MUU1 101 aa11.35□□□□□ -0.59
SMARCA4-202ENST00000413806 CD59P13987 128 aa11.34□□□□□ -0.59
SMARCA4-202ENST00000413806 GTSCR1Q86UQ5 136 aa11.34□□□□□ -0.59
SMARCA4-202ENST00000413806 RPUSD1Q9UJJ7 312 aaKnown RBP11.34□□□□□ -0.59
SMARCA4-202ENST00000413806 TSSC4Q9Y5U2 329 aaPredicted RBP11.34□□□□□ -0.59
SMARCA4-202ENST00000413806 TNFRSF18Q9Y5U5 241 aa11.34□□□□□ -0.59
SMARCA4-202ENST00000413806 RLFQ13129 1914 aa11.34□□□□□ -0.59
SMARCA4-202ENST00000413806 RP1L1Q8IWN7 2480 aaPredicted RBP11.34□□□□□ -0.59
SMARCA4-202ENST00000413806 IL18BPO95998 194 aa11.34□□□□□ -0.59
SMARCA4-202ENST00000413806 CNTFRP26992 372 aa11.34□□□□□ -0.59
SMARCA4-202ENST00000413806 SRSF1Q07955 248 aaKnown RBP eCLIP11.34□□□□□ -0.59
SMARCA4-202ENST00000413806 SCN5AQ14524 2016 aa11.34□□□□□ -0.59
SMARCA4-202ENST00000413806 HIST1H4AP62805 103 aaKnown RBP11.34□□□□□ -0.59
SMARCA4-202ENST00000413806 DMRTC2Q8IXT2 367 aaPredicted RBP11.34□□□□□ -0.59
SMARCA4-202ENST00000413806 SMPXQ9UHP9 88 aa11.34□□□□□ -0.59
SMARCA4-202ENST00000413806 TSKUQ8WUA8 353 aa11.34□□□□□ -0.59
SMARCA4-202ENST00000413806 NXT2Q9NPJ8 142 aaKnown RBP11.34□□□□□ -0.59
SMARCA4-202ENST00000413806 C8orf46Q8TAG6 207 aa11.34□□□□□ -0.59
SMARCA4-202ENST00000413806 IGHV3-49A0A0A0MS15 119 aa11.33□□□□□ -0.6
SMARCA4-202ENST00000413806 C9JCJ5 164 aa11.33□□□□□ -0.6
SMARCA4-202ENST00000413806 E9PLN8 166 aa11.33□□□□□ -0.6
SMARCA4-202ENST00000413806 TFF1P04155 84 aa11.33□□□□□ -0.6
SMARCA4-202ENST00000413806 SBF1O95248 1867 aa11.33□□□□□ -0.6
SMARCA4-202ENST00000413806 TMEM14EPQ6UXP3 125 aa11.33□□□□□ -0.6
SMARCA4-202ENST00000413806 GGTLC1Q9BX51 225 aa11.33□□□□□ -0.6
SMARCA4-202ENST00000413806 THSD7BQ9C0I4 1608 aa11.33□□□□□ -0.6
SMARCA4-202ENST00000413806 FAM231BA6NCW3 169 aa11.33□□□□□ -0.6
SMARCA4-202ENST00000413806 PYYP10082 97 aa11.33□□□□□ -0.6
SMARCA4-202ENST00000413806 PSG8Q9UQ74 426 aa11.33□□□□□ -0.6
SMARCA4-202ENST00000413806 KLF12Q9Y4X4 402 aa11.33□□□□□ -0.6
SMARCA4-202ENST00000413806 ARTNQ5T4W7 220 aa11.32□□□□□ -0.6
SMARCA4-202ENST00000413806 C2orf82Q6UX34 121 aa11.32□□□□□ -0.6
SMARCA4-202ENST00000413806 AGMATQ9BSE5 352 aa11.32□□□□□ -0.6
SMARCA4-202ENST00000413806 M0R2P5 195 aa11.32□□□□□ -0.6
SMARCA4-202ENST00000413806 PPBPP02775 128 aa11.32□□□□□ -0.6
SMARCA4-202ENST00000413806 THBDP07204 575 aa11.32□□□□□ -0.6
SMARCA4-202ENST00000413806 FOXG1P55316 489 aaPredicted RBP11.32□□□□□ -0.6
SMARCA4-202ENST00000413806 FOXF2Q12947 444 aa11.32□□□□□ -0.6
SMARCA4-202ENST00000413806 RNF182Q8N6D2 247 aa11.32□□□□□ -0.6
SMARCA4-202ENST00000413806 TMEM101Q96IK0 257 aa11.32□□□□□ -0.6
SMARCA4-202ENST00000413806 KLHDC3Q9BQ90 382 aa11.32□□□□□ -0.6
SMARCA4-202ENST00000413806 IGKV3-20P01619 116 aa11.32□□□□□ -0.6
SMARCA4-202ENST00000413806 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.31□□□□□ -0.6
SMARCA4-202ENST00000413806 IGKV1-5P01602 117 aa11.31□□□□□ -0.6
SMARCA4-202ENST00000413806 CD33P20138 364 aa11.31□□□□□ -0.6
SMARCA4-202ENST00000413806 RNASE4P34096 147 aaKnown RBP11.31□□□□□ -0.6
SMARCA4-202ENST00000413806 Q0VFX4 171 aa11.31□□□□□ -0.6
SMARCA4-202ENST00000413806 SYS1-DBNDD2H3BUS1 97 aa11.31□□□□□ -0.6
SMARCA4-202ENST00000413806 B3GALT5-AS1P59052 145 aa11.31□□□□□ -0.6
SMARCA4-202ENST00000413806 FHL1Q13642 323 aa11.31□□□□□ -0.6
SMARCA4-202ENST00000413806 PLNP26678 52 aa11.31□□□□□ -0.6
SMARCA4-202ENST00000413806 MYOD1P15172 320 aa11.31□□□□□ -0.6
SMARCA4-202ENST00000413806 RNF5Q99942 180 aa11.31□□□□□ -0.6
SMARCA4-202ENST00000413806 RASL11AQ6T310 242 aa11.3□□□□□ -0.6
SMARCA4-202ENST00000413806 LY96Q9Y6Y9 160 aa11.3□□□□□ -0.6
SMARCA4-202ENST00000413806 MLNRO43193 412 aa11.3□□□□□ -0.6
SMARCA4-202ENST00000413806 Q6P435 159 aa11.3□□□□□ -0.6
SMARCA4-202ENST00000413806 LINC01551Q86U37 167 aa11.3□□□□□ -0.6
SMARCA4-202ENST00000413806 MDS2Q8NDY4 140 aa11.3□□□□□ -0.6
SMARCA4-202ENST00000413806 C7orf69Q9H7B7 122 aa11.3□□□□□ -0.6
SMARCA4-202ENST00000413806 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.3□□□□□ -0.6
SMARCA4-202ENST00000413806 KLF17Q5JT82 389 aaPredicted RBP11.3□□□□□ -0.6
SMARCA4-202ENST00000413806 MRPL27Q9P0M9 148 aaKnown RBP11.3□□□□□ -0.6
SMARCA4-202ENST00000413806 PEMTQ9UBM1 199 aa11.3□□□□□ -0.6
SMARCA4-202ENST00000413806 GGTLC3B5MD39 225 aa11.3□□□□□ -0.6
SMARCA4-202ENST00000413806 PSPNO60542 156 aa11.3□□□□□ -0.6
SMARCA4-202ENST00000413806 CDKN1AP38936 164 aa11.3□□□□□ -0.6
SMARCA4-202ENST00000413806 CD177Q8N6Q3 437 aa11.3□□□□□ -0.6
SMARCA4-202ENST00000413806 DUX3Q96PT4 197 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms