RNA–Protein interactions for RNA: ENST00000412568.6

PTPRF-204, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 4,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-204ENST00000412568 FASNP49327 2511 aaKnown RBP9.15□□□□□ -0.94
PTPRF-204ENST00000412568 OR2T8A6NH00 312 aa9.15□□□□□ -0.94
PTPRF-204ENST00000412568 A8MWL6 223 aa9.15□□□□□ -0.94
PTPRF-204ENST00000412568 CXCL1P09341 107 aa9.15□□□□□ -0.94
PTPRF-204ENST00000412568 FOXA3P55318 350 aaPredicted RBP9.15□□□□□ -0.94
PTPRF-204ENST00000412568 SPSB3Q6PJ21 355 aa9.15□□□□□ -0.94
PTPRF-204ENST00000412568 TMEM144Q7Z5S9 345 aa9.15□□□□□ -0.94
PTPRF-204ENST00000412568 ARHGAP21Q5T5U3 1957 aa9.15□□□□□ -0.95
PTPRF-204ENST00000412568 WDFY4Q6ZS81 3184 aa9.15□□□□□ -0.95
PTPRF-204ENST00000412568 C2CD3Q4AC94 2353 aa9.15□□□□□ -0.95
PTPRF-204ENST00000412568 NBR2O15453 112 aa9.15□□□□□ -0.95
PTPRF-204ENST00000412568 TMEM208Q9BTX3 173 aa9.15□□□□□ -0.95
PTPRF-204ENST00000412568 VENTXO95231 258 aa9.14□□□□□ -0.95
PTPRF-204ENST00000412568 IGKV3-20P01619 116 aa9.14□□□□□ -0.95
PTPRF-204ENST00000412568 DIAPH2-AS1Q14236 149 aa9.14□□□□□ -0.95
PTPRF-204ENST00000412568 C11orf53Q8IXP5 236 aa9.14□□□□□ -0.95
PTPRF-204ENST00000412568 HIST1H2BLQ99880 126 aa9.14□□□□□ -0.95
PTPRF-204ENST00000412568 TRGV3P03979 118 aa9.14□□□□□ -0.95
PTPRF-204ENST00000412568 LMO1P25800 156 aa9.14□□□□□ -0.95
PTPRF-204ENST00000412568 PRCDQ00LT1 54 aa9.14□□□□□ -0.95
PTPRF-204ENST00000412568 PRR31Q5SQ13 230 aa9.14□□□□□ -0.95
PTPRF-204ENST00000412568 SCGB1D4Q6XE38 83 aa9.14□□□□□ -0.95
PTPRF-204ENST00000412568 ARPC1AQ92747 370 aa9.14□□□□□ -0.95
PTPRF-204ENST00000412568 SEPSECSQ9HD40 501 aaKnown RBP9.14□□□□□ -0.95
PTPRF-204ENST00000412568 RPL7P18124 248 aaKnown RBP9.14□□□□□ -0.95
PTPRF-204ENST00000412568 SLC25A34Q6PIV7 304 aa9.14□□□□□ -0.95
PTPRF-204ENST00000412568 CLEC19AQ6UXS0 136 aa9.14□□□□□ -0.95
PTPRF-204ENST00000412568 FAM19A2Q8N3H0 131 aa9.14□□□□□ -0.95
PTPRF-204ENST00000412568 ST6GALNAC6Q969X2 333 aa9.14□□□□□ -0.95
PTPRF-204ENST00000412568 C16orf92Q96LL3 132 aa9.14□□□□□ -0.95
PTPRF-204ENST00000412568 C21orf62Q9NYP8 219 aa9.14□□□□□ -0.95
PTPRF-204ENST00000412568 GNG5P63218 68 aa9.13□□□□□ -0.95
PTPRF-204ENST00000412568 CD69Q07108 199 aa9.13□□□□□ -0.95
PTPRF-204ENST00000412568 TMEM177Q53S58 311 aa9.13□□□□□ -0.95
PTPRF-204ENST00000412568 C12orf54Q6X4T0 127 aa9.13□□□□□ -0.95
PTPRF-204ENST00000412568 GBGT1Q8N5D6 347 aa9.13□□□□□ -0.95
PTPRF-204ENST00000412568 EFNB3Q15768 340 aa9.13□□□□□ -0.95
PTPRF-204ENST00000412568 MSMPQ1L6U9 139 aa9.13□□□□□ -0.95
PTPRF-204ENST00000412568 TCF23Q7RTU1 214 aa9.13□□□□□ -0.95
PTPRF-204ENST00000412568 FAM169BQ8N8A8 192 aa9.13□□□□□ -0.95
PTPRF-204ENST00000412568 PGLYRP4Q96LB8 373 aa9.13□□□□□ -0.95
PTPRF-204ENST00000412568 IGHV1-3A0A0C4DH29 117 aa9.13□□□□□ -0.95
PTPRF-204ENST00000412568 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.13□□□□□ -0.95
PTPRF-204ENST00000412568 GGTLC1Q9BX51 225 aa9.13□□□□□ -0.95
PTPRF-204ENST00000412568 CFAP54Q96N23 3096 aa9.13□□□□□ -0.95
PTPRF-204ENST00000412568 NAV3Q8IVL0 2385 aa9.13□□□□□ -0.95
PTPRF-204ENST00000412568 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.13□□□□□ -0.95
PTPRF-204ENST00000412568 TRAV1-1A0A0B4J248 108 aa9.13□□□□□ -0.95
PTPRF-204ENST00000412568 C15orf62A8K5M9 175 aa9.13□□□□□ -0.95
PTPRF-204ENST00000412568 H0YJW9 148 aa9.13□□□□□ -0.95
PTPRF-204ENST00000412568 AREGP15514 252 aa9.13□□□□□ -0.95
PTPRF-204ENST00000412568 PLP1P60201 277 aa9.13□□□□□ -0.95
PTPRF-204ENST00000412568 JOSD1Q15040 202 aaPredicted RBP9.13□□□□□ -0.95
PTPRF-204ENST00000412568 OR52E5Q8NH55 327 aa9.13□□□□□ -0.95
PTPRF-204ENST00000412568 TBL2Q9Y4P3 447 aaKnown RBP9.13□□□□□ -0.95
PTPRF-204ENST00000412568 SMIM17P0DL12 118 aa9.12□□□□□ -0.95
PTPRF-204ENST00000412568 CNTFRP26992 372 aa9.12□□□□□ -0.95
PTPRF-204ENST00000412568 MAS1LP35410 378 aa9.12□□□□□ -0.95
PTPRF-204ENST00000412568 SLC25A48Q6ZT89 311 aaKnown RBP9.12□□□□□ -0.95
PTPRF-204ENST00000412568 VMO1Q7Z5L0 202 aa9.12□□□□□ -0.95
PTPRF-204ENST00000412568 HIST3H2BBQ8N257 126 aa9.12□□□□□ -0.95
PTPRF-204ENST00000412568 C11orf44Q8N8P7 122 aa9.12□□□□□ -0.95
PTPRF-204ENST00000412568 METTL26Q96S19 204 aa9.12□□□□□ -0.95
PTPRF-204ENST00000412568 OR4C46A6NHA9 309 aa9.12□□□□□ -0.95
PTPRF-204ENST00000412568 GPX4P36969 197 aaPredicted RBP9.12□□□□□ -0.95
PTPRF-204ENST00000412568 ATP5IP56385 69 aaPredicted RBP9.12□□□□□ -0.95
PTPRF-204ENST00000412568 NEU1Q99519 415 aa9.12□□□□□ -0.95
PTPRF-204ENST00000412568 BPTFQ12830 3046 aa9.12□□□□□ -0.95
PTPRF-204ENST00000412568 POLQO75417 2590 aa9.12□□□□□ -0.95
PTPRF-204ENST00000412568 IGLV3-9A0A075B6K5 115 aa9.12□□□□□ -0.95
PTPRF-204ENST00000412568 SNAI2O43623 268 aa9.12□□□□□ -0.95
PTPRF-204ENST00000412568 CEACAM4O75871 244 aa9.12□□□□□ -0.95
PTPRF-204ENST00000412568 EFNA4P52798 201 aa9.12□□□□□ -0.95
PTPRF-204ENST00000412568 Q8NFD4 153 aa9.12□□□□□ -0.95
PTPRF-204ENST00000412568 DERL1Q9BUN8 251 aa9.12□□□□□ -0.95
PTPRF-204ENST00000412568 C19orf24Q9BVV8 132 aa9.12□□□□□ -0.95
PTPRF-204ENST00000412568 SERF1AO75920 110 aa9.11□□□□□ -0.95
PTPRF-204ENST00000412568 FOLR2P14207 255 aa9.11□□□□□ -0.95
PTPRF-204ENST00000412568 SRSF9Q13242 221 aaKnown RBP eCLIP9.11□□□□□ -0.95
PTPRF-204ENST00000412568 C17orf58Q2M2W7 97 aa9.11□□□□□ -0.95
PTPRF-204ENST00000412568 C22orf34Q6ZV56 151 aa9.11□□□□□ -0.95
PTPRF-204ENST00000412568 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.11□□□□□ -0.95
PTPRF-204ENST00000412568 PRB1P04280 392 aa9.11□□□□□ -0.95
PTPRF-204ENST00000412568 GCSHP23434 173 aa9.11□□□□□ -0.95
PTPRF-204ENST00000412568 ATP5G2Q06055 141 aa9.11□□□□□ -0.95
PTPRF-204ENST00000412568 Q6ZSR3 168 aa9.11□□□□□ -0.95
PTPRF-204ENST00000412568 OCC1Q8TAD7 63 aa9.11□□□□□ -0.95
PTPRF-204ENST00000412568 KCNS1Q96KK3 526 aa9.11□□□□□ -0.95
PTPRF-204ENST00000412568 RNASE7Q9H1E1 156 aaKnown RBP9.11□□□□□ -0.95
PTPRF-204ENST00000412568 ABCA12Q86UK0 2595 aa9.11□□□□□ -0.95
PTPRF-204ENST00000412568 NUDT3O95989 172 aa9.11□□□□□ -0.95
PTPRF-204ENST00000412568 AMBPP02760 352 aa9.11□□□□□ -0.95
PTPRF-204ENST00000412568 CACNG8Q8WXS5 425 aa9.11□□□□□ -0.95
PTPRF-204ENST00000412568 PRSS8Q16651 343 aa9.1□□□□□ -0.95
PTPRF-204ENST00000412568 MGST2Q99735 147 aa9.1□□□□□ -0.95
PTPRF-204ENST00000412568 A0A1B0GW64 132 aa9.1□□□□□ -0.95
PTPRF-204ENST00000412568 NPPCP23582 126 aa9.1□□□□□ -0.95
PTPRF-204ENST00000412568 RPL13AP40429 203 aaKnown RBP9.1□□□□□ -0.95
PTPRF-204ENST00000412568 CENPVQ7Z7K6 275 aaPredicted RBP9.1□□□□□ -0.95
PTPRF-204ENST00000412568 MRPL32Q9BYC8 188 aaKnown RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms