RNA–Protein interactions for RNA: ENST00000411034.1

SNORA40.8-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 126 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.8-201ENST00000411034 NCOR2Q9Y618 2525 aa-0.09□□□□□ -2.42
SNORA40.8-201ENST00000411034 KNTC1P50748 2209 aa-0.09□□□□□ -2.42
SNORA40.8-201ENST00000411034 MYO18AQ92614 2054 aaKnown RBP-0.09□□□□□ -2.42
SNORA40.8-201ENST00000411034 BDP1A6H8Y1 2624 aa-0.09□□□□□ -2.42
SNORA40.8-201ENST00000411034 HRNRQ86YZ3 2850 aaPredicted RBP-0.09□□□□□ -2.42
SNORA40.8-201ENST00000411034 CECR2Q9BXF3 1484 aa-0.1□□□□□ -2.42
SNORA40.8-201ENST00000411034 SBF1O95248 1867 aa-0.1□□□□□ -2.42
SNORA40.8-201ENST00000411034 COL7A1Q02388 2944 aa-0.1□□□□□ -2.42
SNORA40.8-201ENST00000411034 HEATR1Q9H583 2144 aaKnown RBP-0.1□□□□□ -2.42
SNORA40.8-201ENST00000411034 ARHGEF28Q8N1W1 1705 aaKnown RBP-0.1□□□□□ -2.42
SNORA40.8-201ENST00000411034 TAF1LQ8IZX4 1826 aa-0.1□□□□□ -2.43
SNORA40.8-201ENST00000411034 C9orf84Q5VXU9 1444 aa-0.1□□□□□ -2.43
SNORA40.8-201ENST00000411034 IGLV3-32A0A0A0MS00 114 aa-0.1□□□□□ -2.43
SNORA40.8-201ENST00000411034 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP-0.1□□□□□ -2.43
SNORA40.8-201ENST00000411034 A0A0A6YYH2 397 aa-0.1□□□□□ -2.43
SNORA40.8-201ENST00000411034 TRBV30A0A0K0K1B3 111 aa-0.1□□□□□ -2.43
SNORA40.8-201ENST00000411034 OR4C46A6NHA9 309 aa-0.1□□□□□ -2.43
SNORA40.8-201ENST00000411034 A6NJ64 397 aa-0.1□□□□□ -2.43
SNORA40.8-201ENST00000411034 FAM25EA8MYX2 175 aa-0.1□□□□□ -2.43
SNORA40.8-201ENST00000411034 C1orf196B1AJZ1 125 aa-0.1□□□□□ -2.43
SNORA40.8-201ENST00000411034 E7EUB6 86 aa-0.1□□□□□ -2.43
SNORA40.8-201ENST00000411034 F8W1H4 67 aa-0.1□□□□□ -2.43
SNORA40.8-201ENST00000411034 M0QX08 132 aa-0.1□□□□□ -2.43
SNORA40.8-201ENST00000411034 PSMD12O00232 456 aaPredicted RBP-0.1□□□□□ -2.43
SNORA40.8-201ENST00000411034 CHP2O43745 196 aa-0.1□□□□□ -2.43
SNORA40.8-201ENST00000411034 TIMM17BO60830 172 aa-0.1□□□□□ -2.43
SNORA40.8-201ENST00000411034 DCTN3O75935 186 aa-0.1□□□□□ -2.43
SNORA40.8-201ENST00000411034 CNIH1O95406 144 aa-0.1□□□□□ -2.43
SNORA40.8-201ENST00000411034 AHSA1O95433 338 aa-0.1□□□□□ -2.43
SNORA40.8-201ENST00000411034 CRYZL1O95825 349 aa-0.1□□□□□ -2.43
SNORA40.8-201ENST00000411034 TNNC2P02585 160 aa-0.1□□□□□ -2.43
SNORA40.8-201ENST00000411034 APOEP02649 317 aa-0.1□□□□□ -2.43
SNORA40.8-201ENST00000411034 SERPINE1P05121 402 aa-0.1□□□□□ -2.43
SNORA40.8-201ENST00000411034 CALB1P05937 261 aa-0.1□□□□□ -2.43
SNORA40.8-201ENST00000411034 CD2P06729 351 aa-0.1□□□□□ -2.43
SNORA40.8-201ENST00000411034 RBP1P09455 135 aa-0.1□□□□□ -2.43
SNORA40.8-201ENST00000411034 HIST1H1EP10412 219 aaKnown RBP-0.1□□□□□ -2.43
SNORA40.8-201ENST00000411034 CD79AP11912 226 aa-0.1□□□□□ -2.43
SNORA40.8-201ENST00000411034 CCL4P13236 92 aa-0.1□□□□□ -2.43
SNORA40.8-201ENST00000411034 S100A4P26447 101 aaKnown RBP-0.1□□□□□ -2.43
SNORA40.8-201ENST00000411034 CASP1P29466 404 aa-0.1□□□□□ -2.43
SNORA40.8-201ENST00000411034 RNASE4P34096 147 aaKnown RBP-0.1□□□□□ -2.43
SNORA40.8-201ENST00000411034 ANP32AP39687 249 aaKnown RBP-0.1□□□□□ -2.43
SNORA40.8-201ENST00000411034 AP2S1P53680 142 aaPredicted RBP-0.1□□□□□ -2.43
SNORA40.8-201ENST00000411034 DEFA3P59666 94 aa-0.1□□□□□ -2.43
SNORA40.8-201ENST00000411034 SPCS3P61009 180 aa-0.1□□□□□ -2.43
SNORA40.8-201ENST00000411034 YPEL3P61236 119 aaPredicted RBP-0.1□□□□□ -2.43
SNORA40.8-201ENST00000411034 PSME3P61289 254 aa-0.1□□□□□ -2.43
SNORA40.8-201ENST00000411034 DYNLT1P63172 113 aa-0.1□□□□□ -2.43
SNORA40.8-201ENST00000411034 HIST3H3Q16695 136 aa-0.1□□□□□ -2.43
SNORA40.8-201ENST00000411034 ASB16-AS1Q495Z4 193 aa-0.1□□□□□ -2.43
SNORA40.8-201ENST00000411034 CDKL4Q5MAI5 379 aa-0.1□□□□□ -2.43
SNORA40.8-201ENST00000411034 SPOPLQ6IQ16 392 aa-0.1□□□□□ -2.43
SNORA40.8-201ENST00000411034 C8orf74Q6P047 294 aa-0.1□□□□□ -2.43
SNORA40.8-201ENST00000411034 PRR15Q8IV56 129 aa-0.1□□□□□ -2.43
SNORA40.8-201ENST00000411034 PDZD9Q8IXQ8 264 aa-0.1□□□□□ -2.43
SNORA40.8-201ENST00000411034 FAM9CQ8IZT9 166 aa-0.1□□□□□ -2.43
SNORA40.8-201ENST00000411034 C12orf45Q8N5I9 185 aaPredicted RBP-0.1□□□□□ -2.43
SNORA40.8-201ENST00000411034 GDPD1Q8N9F7 314 aa-0.1□□□□□ -2.43
SNORA40.8-201ENST00000411034 ST6GALNAC3Q8NDV1 305 aa-0.1□□□□□ -2.43
SNORA40.8-201ENST00000411034 SLC30A7Q8NEW0 376 aa-0.1□□□□□ -2.43
SNORA40.8-201ENST00000411034 OR52L1Q8NGH7 329 aa-0.1□□□□□ -2.43
SNORA40.8-201ENST00000411034 OR2T35Q8NGX2 323 aa-0.1□□□□□ -2.43
SNORA40.8-201ENST00000411034 OR10K1Q8NGX5 313 aa-0.1□□□□□ -2.43
SNORA40.8-201ENST00000411034 OR2T10Q8NGZ9 312 aa-0.1□□□□□ -2.43
SNORA40.8-201ENST00000411034 SLC25A40Q8TBP6 338 aa-0.1□□□□□ -2.43
SNORA40.8-201ENST00000411034 STAG3L4Q8TBR4 150 aa-0.1□□□□□ -2.43
SNORA40.8-201ENST00000411034 PLAC4Q8WY50 150 aa-0.1□□□□□ -2.43
SNORA40.8-201ENST00000411034 SLAMF6Q96DU3 332 aa-0.1□□□□□ -2.43
SNORA40.8-201ENST00000411034 C2orf50Q96LR7 162 aa-0.1□□□□□ -2.43
SNORA40.8-201ENST00000411034 OR52E6Q96RD3 313 aa-0.1□□□□□ -2.43
SNORA40.8-201ENST00000411034 TP53RKQ96S44 253 aa-0.1□□□□□ -2.43
SNORA40.8-201ENST00000411034 GPER1Q99527 375 aa-0.1□□□□□ -2.43
SNORA40.8-201ENST00000411034 HIST1H2BLQ99880 126 aa-0.1□□□□□ -2.43
SNORA40.8-201ENST00000411034 LLPHQ9BRT6 129 aaKnown RBP-0.1□□□□□ -2.43
SNORA40.8-201ENST00000411034 PRADC1Q9BSG0 188 aa-0.1□□□□□ -2.43
SNORA40.8-201ENST00000411034 CCDC94Q9BW85 323 aaPredicted RBP-0.1□□□□□ -2.43
SNORA40.8-201ENST00000411034 TMEM126AQ9H061 195 aa-0.1□□□□□ -2.43
SNORA40.8-201ENST00000411034 DRC3Q9H069 523 aa-0.1□□□□□ -2.43
SNORA40.8-201ENST00000411034 WFDC10AQ9H1F0 79 aa-0.1□□□□□ -2.43
SNORA40.8-201ENST00000411034 TMEM133Q9H2Q1 129 aa-0.1□□□□□ -2.43
SNORA40.8-201ENST00000411034 NHP2Q9NX24 153 aaKnown RBP-0.1□□□□□ -2.43
SNORA40.8-201ENST00000411034 MED29Q9NX70 200 aa-0.1□□□□□ -2.43
SNORA40.8-201ENST00000411034 IDI2-AS1Q9NZ38 188 aa-0.1□□□□□ -2.43
SNORA40.8-201ENST00000411034 USE1Q9NZ43 259 aa-0.1□□□□□ -2.43
SNORA40.8-201ENST00000411034 PCTPQ9UKL6 214 aa-0.1□□□□□ -2.43
SNORA40.8-201ENST00000411034 ZFYVE26Q68DK2 2539 aa-0.1□□□□□ -2.43
SNORA40.8-201ENST00000411034 RIMBP3CA6NJZ7 1639 aa-0.1□□□□□ -2.43
SNORA40.8-201ENST00000411034 RIMBP3BA6NNM3 1639 aa-0.1□□□□□ -2.43
SNORA40.8-201ENST00000411034 RFX7Q2KHR2 1363 aa-0.1□□□□□ -2.43
SNORA40.8-201ENST00000411034 MAP3K5Q99683 1374 aa-0.1□□□□□ -2.43
SNORA40.8-201ENST00000411034 PLXNA4Q9HCM2 1894 aa-0.1□□□□□ -2.43
SNORA40.8-201ENST00000411034 RIMBP3Q9UFD9 1639 aa-0.1□□□□□ -2.43
SNORA40.8-201ENST00000411034 SCN10AQ9Y5Y9 1956 aa-0.1□□□□□ -2.43
SNORA40.8-201ENST00000411034 ECM29Q5VYK3 1845 aa-0.1□□□□□ -2.43
SNORA40.8-201ENST00000411034 PLXND1Q9Y4D7 1925 aa-0.11□□□□□ -2.43
SNORA40.8-201ENST00000411034 CHD3Q12873 2000 aaKnown RBP-0.11□□□□□ -2.43
SNORA40.8-201ENST00000411034 FANCMQ8IYD8 2048 aa-0.11□□□□□ -2.43
SNORA40.8-201ENST00000411034 KDM6AO15550 1401 aaPredicted RBP-0.11□□□□□ -2.43
SNORA40.8-201ENST00000411034 TNS3Q68CZ2 1445 aa-0.11□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms