RNA–Protein interactions for RNA: ENST00000410007.5

PBRM1-208, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 4,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-208ENST00000410007 DPH3Q96FX2 82 aa7.44□□□□□ -1.22
PBRM1-208ENST00000410007 F11RQ9Y624 299 aaKnown RBP7.44□□□□□ -1.22
PBRM1-208ENST00000410007 MUC21A0A0G2JKD1 596 aa7.44□□□□□ -1.22
PBRM1-208ENST00000410007 MUC21A0A140T8X8 626 aa7.44□□□□□ -1.22
PBRM1-208ENST00000410007 PSG1P11464 419 aa7.44□□□□□ -1.22
PBRM1-208ENST00000410007 PSMG4Q5JS54 123 aa7.44□□□□□ -1.22
PBRM1-208ENST00000410007 Q8TCH9 128 aa7.44□□□□□ -1.22
PBRM1-208ENST00000410007 TSC2P49815 1807 aa7.44□□□□□ -1.22
PBRM1-208ENST00000410007 MSMBP08118 114 aa7.44□□□□□ -1.22
PBRM1-208ENST00000410007 TMEM170BQ5T4T1 132 aa7.44□□□□□ -1.22
PBRM1-208ENST00000410007 TMEM14EPQ6UXP3 125 aa7.44□□□□□ -1.22
PBRM1-208ENST00000410007 TMEM183AQ8IXX5 376 aa7.44□□□□□ -1.22
PBRM1-208ENST00000410007 SCGB3A1Q96QR1 104 aa7.44□□□□□ -1.22
PBRM1-208ENST00000410007 PMCHL2Q9BQD1 86 aa7.44□□□□□ -1.22
PBRM1-208ENST00000410007 STAG3L3P0CL85 134 aa7.44□□□□□ -1.22
PBRM1-208ENST00000410007 SAA4P35542 130 aa7.44□□□□□ -1.22
PBRM1-208ENST00000410007 CACNG7P62955 275 aa7.44□□□□□ -1.22
PBRM1-208ENST00000410007 DNLZQ5SXM8 178 aa7.44□□□□□ -1.22
PBRM1-208ENST00000410007 RNF144BQ7Z419 303 aa7.44□□□□□ -1.22
PBRM1-208ENST00000410007 SRSF8Q9BRL6 282 aaKnown RBP7.44□□□□□ -1.22
PBRM1-208ENST00000410007 ABCA1O95477 2261 aa7.43□□□□□ -1.22
PBRM1-208ENST00000410007 CREBBPQ92793 2442 aa7.43□□□□□ -1.22
PBRM1-208ENST00000410007 LINC00473A8K010 186 aa7.43□□□□□ -1.22
PBRM1-208ENST00000410007 OR5AN1Q8NGI8 311 aa7.43□□□□□ -1.22
PBRM1-208ENST00000410007 WNK2Q9Y3S1 2297 aa7.43□□□□□ -1.22
PBRM1-208ENST00000410007 H3BRM9 83 aa7.43□□□□□ -1.22
PBRM1-208ENST00000410007 FGF16O43320 207 aa7.43□□□□□ -1.22
PBRM1-208ENST00000410007 SAP30O75446 220 aa7.43□□□□□ -1.22
PBRM1-208ENST00000410007 SRD5A1P18405 259 aa7.43□□□□□ -1.22
PBRM1-208ENST00000410007 WFDC1Q9HC57 220 aa7.43□□□□□ -1.22
PBRM1-208ENST00000410007 LOC107984156A0A0G2JMH3 177 aa7.43□□□□□ -1.22
PBRM1-208ENST00000410007 H7C2G1 150 aa7.43□□□□□ -1.22
PBRM1-208ENST00000410007 GCSAMLQ5JQS6 135 aa7.43□□□□□ -1.22
PBRM1-208ENST00000410007 ARL17AQ8IVW1 177 aa7.43□□□□□ -1.22
PBRM1-208ENST00000410007 BEND2Q8NDZ0 799 aa7.43□□□□□ -1.22
PBRM1-208ENST00000410007 MUC6Q6W4X9 2439 aa7.43□□□□□ -1.22
PBRM1-208ENST00000410007 FAM223BA6NKX1 122 aa7.42□□□□□ -1.22
PBRM1-208ENST00000410007 J3QKU1 62 aa7.42□□□□□ -1.22
PBRM1-208ENST00000410007 UBE2E1P51965 193 aa7.42□□□□□ -1.22
PBRM1-208ENST00000410007 FBLN7Q53RD9 439 aa7.42□□□□□ -1.22
PBRM1-208ENST00000410007 OR10J3Q5JRS4 329 aa7.42□□□□□ -1.22
PBRM1-208ENST00000410007 C9orf139Q6ZV77 190 aa7.42□□□□□ -1.22
PBRM1-208ENST00000410007 FAM223AQ8IWN6 122 aa7.42□□□□□ -1.22
PBRM1-208ENST00000410007 C18orf15Q96N68 181 aa7.42□□□□□ -1.22
PBRM1-208ENST00000410007 RNASE7Q9H1E1 156 aaKnown RBP7.42□□□□□ -1.22
PBRM1-208ENST00000410007 NCOR1P1Q9H4R4 102 aa7.42□□□□□ -1.22
PBRM1-208ENST00000410007 TRAV3A0A0B4J244 114 aa7.42□□□□□ -1.22
PBRM1-208ENST00000410007 TMEM50AO95807 157 aa7.42□□□□□ -1.22
PBRM1-208ENST00000410007 PPBPP02775 128 aa7.42□□□□□ -1.22
PBRM1-208ENST00000410007 LMO1P25800 156 aa7.42□□□□□ -1.22
PBRM1-208ENST00000410007 SLC25A39Q9BZJ4 359 aaPredicted RBP7.42□□□□□ -1.22
PBRM1-208ENST00000410007 TMEM160Q9NX00 188 aa7.42□□□□□ -1.22
PBRM1-208ENST00000410007 FABP2P12104 132 aa7.42□□□□□ -1.22
PBRM1-208ENST00000410007 PIP4P2Q8N4L2 257 aa7.42□□□□□ -1.22
PBRM1-208ENST00000410007 NLRC5Q86WI3 1866 aa7.42□□□□□ -1.22
PBRM1-208ENST00000410007 PCNX1Q96RV3 2341 aa7.42□□□□□ -1.22
PBRM1-208ENST00000410007 PTPRDP23468 1912 aa7.42□□□□□ -1.22
PBRM1-208ENST00000410007 PMS2P5A8MQ11 134 aa7.42□□□□□ -1.22
PBRM1-208ENST00000410007 RNF223E7ERA6 249 aa7.42□□□□□ -1.22
PBRM1-208ENST00000410007 F2Z2F3 143 aa7.42□□□□□ -1.22
PBRM1-208ENST00000410007 CFPP27918 469 aa7.42□□□□□ -1.22
PBRM1-208ENST00000410007 Q5PR19 223 aa7.42□□□□□ -1.22
PBRM1-208ENST00000410007 IMMP2LQ96T52 175 aa7.42□□□□□ -1.22
PBRM1-208ENST00000410007 ST20Q9HBF5 79 aa7.42□□□□□ -1.22
PBRM1-208ENST00000410007 ZNF256Q9Y2P7 627 aaPredicted RBP7.42□□□□□ -1.22
PBRM1-208ENST00000410007 ZFHX2Q9C0A1 2572 aaPredicted RBP7.42□□□□□ -1.22
PBRM1-208ENST00000410007 UQCRFS1P47985 274 aa7.41□□□□□ -1.22
PBRM1-208ENST00000410007 GBF1Q92538 1859 aa7.41□□□□□ -1.22
PBRM1-208ENST00000410007 FER1L5A0AVI2 2057 aa7.41□□□□□ -1.22
PBRM1-208ENST00000410007 TRAV1-1A0A0B4J248 108 aa7.41□□□□□ -1.22
PBRM1-208ENST00000410007 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.41□□□□□ -1.22
PBRM1-208ENST00000410007 KLF17Q5JT82 389 aaPredicted RBP7.41□□□□□ -1.22
PBRM1-208ENST00000410007 RNF114Q9Y508 228 aa7.41□□□□□ -1.22
PBRM1-208ENST00000410007 WDR81Q562E7 1941 aa7.41□□□□□ -1.22
PBRM1-208ENST00000410007 TRAV5A0A0B4J249 113 aa7.41□□□□□ -1.22
PBRM1-208ENST00000410007 CD33P20138 364 aa7.41□□□□□ -1.22
PBRM1-208ENST00000410007 HINT1P49773 126 aaPredicted RBP7.41□□□□□ -1.22
PBRM1-208ENST00000410007 FAM215AQ9Y5M1 114 aa7.41□□□□□ -1.22
PBRM1-208ENST00000410007 BDP1A6H8Y1 2624 aa7.41□□□□□ -1.22
PBRM1-208ENST00000410007 PHF3Q92576 2039 aaKnown RBP7.41□□□□□ -1.22
PBRM1-208ENST00000410007 TRGV4A0A0C4DH28 118 aa7.41□□□□□ -1.22
PBRM1-208ENST00000410007 IGLV1-44P01699 117 aa7.41□□□□□ -1.22
PBRM1-208ENST00000410007 IGF2-ASQ6U949 168 aa7.41□□□□□ -1.22
PBRM1-208ENST00000410007 SMIM12Q96EX1 92 aa7.41□□□□□ -1.22
PBRM1-208ENST00000410007 MRAP2Q96G30 205 aa7.41□□□□□ -1.22
PBRM1-208ENST00000410007 PLXNA4Q9HCM2 1894 aa7.4□□□□□ -1.22
PBRM1-208ENST00000410007 RPL15P61313 204 aaKnown RBP7.4□□□□□ -1.22
PBRM1-208ENST00000410007 OCC1Q8TAD7 63 aa7.4□□□□□ -1.22
PBRM1-208ENST00000410007 SCRT1Q9BWW7 348 aa7.4□□□□□ -1.22
PBRM1-208ENST00000410007 PCNX2A6NKB5 2137 aa7.4□□□□□ -1.22
PBRM1-208ENST00000410007 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.4□□□□□ -1.226e-7■■■■■ 31.4
PBRM1-208ENST00000410007 TCF15Q12870 199 aa7.4□□□□□ -1.22
PBRM1-208ENST00000410007 TCF23Q7RTU1 214 aa7.4□□□□□ -1.22
PBRM1-208ENST00000410007 MGST2Q99735 147 aa7.4□□□□□ -1.22
PBRM1-208ENST00000410007 VSIRQ9H7M9 311 aa7.4□□□□□ -1.22
PBRM1-208ENST00000410007 ZNF581Q9P0T4 197 aa7.4□□□□□ -1.22
PBRM1-208ENST00000410007 CADP27708 2225 aa7.4□□□□□ -1.22
PBRM1-208ENST00000410007 DOCK7Q96N67 2140 aa7.4□□□□□ -1.22
PBRM1-208ENST00000410007 FNDC10F2Z333 226 aa7.4□□□□□ -1.22
PBRM1-208ENST00000410007 HOXA5P20719 270 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms