RNA–Protein interactions for RNA: ENST00000409958.6

VSX1-204, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,305 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-204ENST00000409958 RCL1Q9Y2P8 373 aaKnown RBP15.47■□□□□ 0.07
VSX1-204ENST00000409958 IGKV3-7A0A075B6H7 116 aa15.46■□□□□ 0.07
VSX1-204ENST00000409958 C5orf51A6NDU8 294 aa15.46■□□□□ 0.07
VSX1-204ENST00000409958 TSC22D2O75157 780 aa15.46■□□□□ 0.07
VSX1-204ENST00000409958 HNRNPCP07910 306 aaKnown RBP eCLIP15.46■□□□□ 0.07
VSX1-204ENST00000409958 P2RY1P47900 373 aa15.46■□□□□ 0.07
VSX1-204ENST00000409958 ODF3L2Q3SX64 289 aa15.46■□□□□ 0.07
VSX1-204ENST00000409958 GRAMD2BQ96HH9 432 aa15.46■□□□□ 0.07
VSX1-204ENST00000409958 C2orf50Q96LR7 162 aa15.46■□□□□ 0.07
VSX1-204ENST00000409958 RCHY1Q96PM5 261 aa15.46■□□□□ 0.07
VSX1-204ENST00000409958 TRGV9Q99603 122 aa15.46■□□□□ 0.07
VSX1-204ENST00000409958 GPN1Q9HCN4 374 aaPredicted RBP15.46■□□□□ 0.07
VSX1-204ENST00000409958 CMC4P56277 68 aaPredicted RBP15.45■□□□□ 0.06
VSX1-204ENST00000409958 ZNF90Q03938 601 aa15.45■□□□□ 0.06
VSX1-204ENST00000409958 TMEM14EPQ6UXP3 125 aa15.45■□□□□ 0.06
VSX1-204ENST00000409958 RNF125Q96EQ8 232 aa15.45■□□□□ 0.06
VSX1-204ENST00000409958 UBQLN2Q9UHD9 624 aa15.45■□□□□ 0.06
VSX1-204ENST00000409958 IGKV1OR2-108A0A075B7D4 117 aa15.44■□□□□ 0.06
VSX1-204ENST00000409958 TRAV2A0A0B4J234 112 aa15.44■□□□□ 0.06
VSX1-204ENST00000409958 PMS2P5A8MQ11 134 aa15.44■□□□□ 0.06
VSX1-204ENST00000409958 SNRPGP15A8MWD9 76 aa15.44■□□□□ 0.06
VSX1-204ENST00000409958 INMT-MINDY4F8WBC2 141 aa15.44■□□□□ 0.06
VSX1-204ENST00000409958 PRAF2O60831 178 aa15.44■□□□□ 0.06
VSX1-204ENST00000409958 TFPI2P48307 235 aa15.44■□□□□ 0.06
VSX1-204ENST00000409958 RPL11P62913 178 aaKnown RBP15.44■□□□□ 0.06
VSX1-204ENST00000409958 GSG1LQ6UXU4 331 aa15.44■□□□□ 0.06
VSX1-204ENST00000409958 ACOT7LQ6ZUV0 252 aa15.44■□□□□ 0.06
VSX1-204ENST00000409958 GBGT1Q8N5D6 347 aa15.44■□□□□ 0.06
VSX1-204ENST00000409958 WWC2-AS2Q96NR7 200 aa15.44■□□□□ 0.06
VSX1-204ENST00000409958 CITED4Q96RK1 184 aa15.44■□□□□ 0.06
VSX1-204ENST00000409958 SPATA25Q9BR10 227 aa15.44■□□□□ 0.06
VSX1-204ENST00000409958 MS4A6AQ9H2W1 248 aa15.44■□□□□ 0.06
VSX1-204ENST00000409958 RABAC1Q9UI14 185 aa15.44■□□□□ 0.06
VSX1-204ENST00000409958 C7orf66A4D0T2 115 aa15.43■□□□□ 0.06
VSX1-204ENST00000409958 DNASE2O00115 360 aaPredicted RBP15.43■□□□□ 0.06
VSX1-204ENST00000409958 OR8G2PQ6IF36 304 aa15.43■□□□□ 0.06
VSX1-204ENST00000409958 MARVELD1Q9BSK0 173 aa15.43■□□□□ 0.06
VSX1-204ENST00000409958 TENM3Q9P273 2699 aa15.43■□□□□ 0.06
VSX1-204ENST00000409958 LOC102724200A0A096LPH7 203 aaPredicted RBP15.43■□□□□ 0.06
VSX1-204ENST00000409958 K7EPK0 472 aa15.43■□□□□ 0.06
VSX1-204ENST00000409958 METTL15P1P0C7V9 234 aa15.43■□□□□ 0.06
VSX1-204ENST00000409958 AKR1C1Q04828 323 aa15.43■□□□□ 0.06
VSX1-204ENST00000409958 C16orf54Q6UWD8 224 aa15.43■□□□□ 0.06
VSX1-204ENST00000409958 TMEM144Q7Z5S9 345 aa15.43■□□□□ 0.06
VSX1-204ENST00000409958 GGTLC1Q9BX51 225 aa15.43■□□□□ 0.06
VSX1-204ENST00000409958 L7N2F9 121 aa15.42■□□□□ 0.06
VSX1-204ENST00000409958 CFDP00746 253 aaPredicted RBP15.42■□□□□ 0.06
VSX1-204ENST00000409958 NUP62P37198 522 aaPredicted RBP15.42■□□□□ 0.06
VSX1-204ENST00000409958 EIF2B2P49770 351 aaKnown RBP15.42■□□□□ 0.06
VSX1-204ENST00000409958 VAMP2P63027 116 aa15.42■□□□□ 0.06
VSX1-204ENST00000409958 IL15RAQ13261 267 aa15.42■□□□□ 0.06
VSX1-204ENST00000409958 WFDC3Q8IUB2 231 aa15.42■□□□□ 0.06
VSX1-204ENST00000409958 OR10P1Q8NGE3 313 aa15.42■□□□□ 0.06
VSX1-204ENST00000409958 GLMPQ8WWB7 406 aa15.42■□□□□ 0.06
VSX1-204ENST00000409958 PBDC1Q9BVG4 233 aa15.42■□□□□ 0.06
VSX1-204ENST00000409958 PFDN2Q9UHV9 154 aa15.42■□□□□ 0.06
VSX1-204ENST00000409958 LSM5Q9Y4Y9 91 aaKnown RBP15.42■□□□□ 0.06
VSX1-204ENST00000409958 HELTA6NFD8 242 aa15.41■□□□□ 0.06
VSX1-204ENST00000409958 FNDC10F2Z333 226 aa15.41■□□□□ 0.06
VSX1-204ENST00000409958 BUB3O43684 328 aa15.41■□□□□ 0.06
VSX1-204ENST00000409958 CCNKO75909 580 aa15.41■□□□□ 0.06
VSX1-204ENST00000409958 AP2S1P53680 142 aaPredicted RBP15.41■□□□□ 0.06
VSX1-204ENST00000409958 DLK1P80370 383 aa15.41■□□□□ 0.06
VSX1-204ENST00000409958 OR2F1Q13607 317 aa15.41■□□□□ 0.06
VSX1-204ENST00000409958 MAP6D1Q9H9H5 199 aa15.41■□□□□ 0.06
VSX1-204ENST00000409958 NBEAL2Q6ZNJ1 2754 aa15.4■□□□□ 0.06
VSX1-204ENST00000409958 SMCO3A2RU48 225 aa15.4■□□□□ 0.06
VSX1-204ENST00000409958 LYZP61626 148 aa15.4■□□□□ 0.06
VSX1-204ENST00000409958 STXBP6Q8NFX7 210 aa15.4■□□□□ 0.06
VSX1-204ENST00000409958 C11orf1Q9H5F2 150 aa15.4■□□□□ 0.06
VSX1-204ENST00000409958 K7EQG2 157 aa15.39■□□□□ 0.05
VSX1-204ENST00000409958 APRG1Q8IVJ8 170 aa15.39■□□□□ 0.05
VSX1-204ENST00000409958 PVALBP20472 110 aaPredicted RBP15.38■□□□□ 0.05
VSX1-204ENST00000409958 S100A10P60903 97 aa15.38■□□□□ 0.05
VSX1-204ENST00000409958 RRAS2P62070 204 aaPredicted RBP15.38■□□□□ 0.05
VSX1-204ENST00000409958 RAB32Q13637 225 aa15.38■□□□□ 0.05
VSX1-204ENST00000409958 BPIFCQ8NFQ6 507 aa15.38■□□□□ 0.05
VSX1-204ENST00000409958 GGACTQ9BVM4 153 aa15.38■□□□□ 0.05
VSX1-204ENST00000409958 NPVFQ9HCQ7 196 aa15.38■□□□□ 0.05
VSX1-204ENST00000409958 MGAT4CQ9UBM8 478 aa15.38■□□□□ 0.05
VSX1-204ENST00000409958 GOSR2O14653 212 aa15.37■□□□□ 0.05
VSX1-204ENST00000409958 BCAP31P51572 246 aa15.37■□□□□ 0.05
VSX1-204ENST00000409958 ARL16Q0P5N6 197 aa15.37■□□□□ 0.05
VSX1-204ENST00000409958 C1orf194Q5T5A4 169 aa15.37■□□□□ 0.05
VSX1-204ENST00000409958 SIGLEC15Q6ZMC9 328 aa15.37■□□□□ 0.05
VSX1-204ENST00000409958 FAM24BQ8N5W8 94 aa15.37■□□□□ 0.05
VSX1-204ENST00000409958 DCANP1Q8TF63 244 aa15.37■□□□□ 0.05
VSX1-204ENST00000409958 SLC45A2Q9UMX9 530 aa15.37■□□□□ 0.05
VSX1-204ENST00000409958 KIR2DL5BA0A0G2JN68 375 aa15.36■□□□□ 0.05
VSX1-204ENST00000409958 KIR2DL5BA0A0G2JPC4 375 aa15.36■□□□□ 0.05
VSX1-204ENST00000409958 DEDDO75618 318 aa15.36■□□□□ 0.05
VSX1-204ENST00000409958 CAV2P51636 162 aa15.36■□□□□ 0.05
VSX1-204ENST00000409958 APOC4P55056 127 aa15.36■□□□□ 0.05
VSX1-204ENST00000409958 DEFB131AP59861 70 aa15.36■□□□□ 0.05
VSX1-204ENST00000409958 TMEM182Q6ZP80 229 aaPredicted RBP15.36■□□□□ 0.05
VSX1-204ENST00000409958 CYP2G1PQ6ZSU1 146 aa15.36■□□□□ 0.05
VSX1-204ENST00000409958 KIR2DL5AQ8N109 375 aa15.36■□□□□ 0.05
VSX1-204ENST00000409958 STPG3Q8N7X2 389 aa15.36■□□□□ 0.05
VSX1-204ENST00000409958 KIR2DL5BQ8NHK3 375 aa15.36■□□□□ 0.05
VSX1-204ENST00000409958 SIX6O95475 246 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms