RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 GATCO43716 136 aaKnown RBP9.15□□□□□ -0.95
SNX13-202ENST00000409604 SYNJ2BPP57105 145 aa9.15□□□□□ -0.95
SNX13-202ENST00000409604 MEF2BQ02080 365 aaPredicted RBP9.15□□□□□ -0.95
SNX13-202ENST00000409604 WT1-ASQ06250 92 aa9.15□□□□□ -0.95
SNX13-202ENST00000409604 KHDC3LQ587J8 217 aa9.15□□□□□ -0.95
SNX13-202ENST00000409604 Q8N7P7 452 aa9.15□□□□□ -0.95
SNX13-202ENST00000409604 TMEM167AQ8TBQ9 72 aa9.15□□□□□ -0.95
SNX13-202ENST00000409604 SEPSECSQ9HD40 501 aaKnown RBP9.15□□□□□ -0.95
SNX13-202ENST00000409604 A0A0G2JLM5 398 aa9.14□□□□□ -0.95
SNX13-202ENST00000409604 OVOL3O00110 214 aa9.14□□□□□ -0.95
SNX13-202ENST00000409604 HOXB4P17483 251 aaPredicted RBP9.14□□□□□ -0.95
SNX13-202ENST00000409604 BMI1P35226 326 aa9.14□□□□□ -0.95
SNX13-202ENST00000409604 FAM3BP58499 235 aaPredicted RBP9.14□□□□□ -0.95
SNX13-202ENST00000409604 DLK1P80370 383 aa9.14□□□□□ -0.95
SNX13-202ENST00000409604 SCRT1Q9BWW7 348 aa9.14□□□□□ -0.95
SNX13-202ENST00000409604 RAB19A4D1S5 217 aa9.14□□□□□ -0.95
SNX13-202ENST00000409604 NDUFB8O95169 186 aa9.14□□□□□ -0.95
SNX13-202ENST00000409604 FABP4P15090 132 aa9.14□□□□□ -0.95
SNX13-202ENST00000409604 OR1L6Q8NGR2 347 aa9.14□□□□□ -0.95
SNX13-202ENST00000409604 IFT22Q9H7X7 185 aa9.14□□□□□ -0.95
SNX13-202ENST00000409604 C15orf62A8K5M9 175 aa9.14□□□□□ -0.95
SNX13-202ENST00000409604 MPDU1O75352 247 aa9.14□□□□□ -0.95
SNX13-202ENST00000409604 TMEM144Q7Z5S9 345 aa9.14□□□□□ -0.95
SNX13-202ENST00000409604 RNF125Q96EQ8 232 aa9.14□□□□□ -0.95
SNX13-202ENST00000409604 OR2D3Q8NGH3 330 aa9.13□□□□□ -0.95
SNX13-202ENST00000409604 OR5AN1Q8NGI8 311 aa9.13□□□□□ -0.95
SNX13-202ENST00000409604 OR52E5Q8NH55 327 aa9.13□□□□□ -0.95
SNX13-202ENST00000409604 TBX15Q96SF7 602 aa9.13□□□□□ -0.95
SNX13-202ENST00000409604 SPOCK3Q9BQ16 436 aa9.13□□□□□ -0.95
SNX13-202ENST00000409604 GCHFRP30047 84 aa9.13□□□□□ -0.95
SNX13-202ENST00000409604 LMO4P61968 165 aa9.13□□□□□ -0.95
SNX13-202ENST00000409604 SRSF3P84103 164 aaKnown RBP9.13□□□□□ -0.95
SNX13-202ENST00000409604 TEX29Q8N6K0 151 aa9.13□□□□□ -0.95
SNX13-202ENST00000409604 FAM210AQ96ND0 272 aa9.13□□□□□ -0.95
SNX13-202ENST00000409604 ZNF705FA8MVS1 300 aaPredicted RBP9.13□□□□□ -0.95
SNX13-202ENST00000409604 ZNF705DP0CH99 300 aaPredicted RBP9.13□□□□□ -0.95
SNX13-202ENST00000409604 ZNF705BP0CI00 300 aaPredicted RBP9.13□□□□□ -0.95
SNX13-202ENST00000409604 TMEM78Q5T7P6 136 aa9.13□□□□□ -0.95
SNX13-202ENST00000409604 GAR1Q9NY12 217 aaKnown RBP9.13□□□□□ -0.95
SNX13-202ENST00000409604 C7orf77A4D0Y5 90 aa9.12□□□□□ -0.95
SNX13-202ENST00000409604 PMS2P5A8MQ11 134 aa9.12□□□□□ -0.95
SNX13-202ENST00000409604 ZNF688P0C7X2 276 aa9.12□□□□□ -0.95
SNX13-202ENST00000409604 Q8NFD4 153 aa9.12□□□□□ -0.95
SNX13-202ENST00000409604 TMEM177Q53S58 311 aa9.12□□□□□ -0.95
SNX13-202ENST00000409604 EXOC3-AS1Q8N2X6 119 aa9.12□□□□□ -0.95
SNX13-202ENST00000409604 LRTM2Q8N967 370 aa9.12□□□□□ -0.95
SNX13-202ENST00000409604 NAT8BQ9UHF3 227 aa9.12□□□□□ -0.95
SNX13-202ENST00000409604 SAP30O75446 220 aa9.12□□□□□ -0.95
SNX13-202ENST00000409604 RPL7P18124 248 aaKnown RBP9.12□□□□□ -0.95
SNX13-202ENST00000409604 RAB4AP20338 218 aa9.12□□□□□ -0.95
SNX13-202ENST00000409604 PAX8Q06710 450 aa9.12□□□□□ -0.95
SNX13-202ENST00000409604 EBLN2Q6P2I7 272 aa9.12□□□□□ -0.95
SNX13-202ENST00000409604 Q6ZS49 121 aa9.12□□□□□ -0.95
SNX13-202ENST00000409604 C3orf56Q8N813 242 aa9.12□□□□□ -0.95
SNX13-202ENST00000409604 DEFB104AQ8WTQ1 72 aa9.12□□□□□ -0.95
SNX13-202ENST00000409604 G3V3Q6 166 aa9.12□□□□□ -0.95
SNX13-202ENST00000409604 CD99P14209 185 aa9.12□□□□□ -0.95
SNX13-202ENST00000409604 CFPP27918 469 aa9.12□□□□□ -0.95
SNX13-202ENST00000409604 COMPP49747 757 aaPredicted RBP9.12□□□□□ -0.95
SNX13-202ENST00000409604 RELQ04864 619 aaPredicted RBP9.12□□□□□ -0.95
SNX13-202ENST00000409604 SRSF7Q16629 238 aaKnown RBP eCLIP9.12□□□□□ -0.95
SNX13-202ENST00000409604 HSD17B13Q7Z5P4 300 aaPredicted RBP9.12□□□□□ -0.95
SNX13-202ENST00000409604 FAM110DQ8TAY7 271 aaPredicted RBP9.12□□□□□ -0.95
SNX13-202ENST00000409604 PRELID1Q9Y255 219 aa9.12□□□□□ -0.95
SNX13-202ENST00000409604 SCO2A0A1W2PP80 73 aa9.11□□□□□ -0.95
SNX13-202ENST00000409604 A0A1W2PS18 150 aa9.11□□□□□ -0.95
SNX13-202ENST00000409604 P01737 135 aa9.11□□□□□ -0.95
SNX13-202ENST00000409604 RNASE2P10153 161 aaKnown RBP9.11□□□□□ -0.95
SNX13-202ENST00000409604 PPIFP30405 207 aaKnown RBP9.11□□□□□ -0.95
SNX13-202ENST00000409604 FXYD7P58549 80 aa9.11□□□□□ -0.95
SNX13-202ENST00000409604 STPG2Q8N412 459 aa9.11□□□□□ -0.95
SNX13-202ENST00000409604 C5orf17Q8NAS9 161 aa9.11□□□□□ -0.95
SNX13-202ENST00000409604 C5orf30Q96GV9 206 aa9.11□□□□□ -0.95
SNX13-202ENST00000409604 PROP1O75360 226 aa9.11□□□□□ -0.95
SNX13-202ENST00000409604 HIST1H1BP16401 226 aaKnown RBP9.11□□□□□ -0.95
SNX13-202ENST00000409604 ZNF562Q6V9R5 426 aa9.11□□□□□ -0.95
SNX13-202ENST00000409604 OR10G8Q8NGN5 311 aa9.11□□□□□ -0.95
SNX13-202ENST00000409604 GGTLC1Q9BX51 225 aa9.11□□□□□ -0.95
SNX13-202ENST00000409604 GRIFINA4D1Z8 144 aa9.11□□□□□ -0.95
SNX13-202ENST00000409604 M0QZK8 103 aa9.11□□□□□ -0.95
SNX13-202ENST00000409604 M0R3E3 92 aa9.11□□□□□ -0.95
SNX13-202ENST00000409604 ASPHD1Q5U4P2 390 aa9.11□□□□□ -0.95
SNX13-202ENST00000409604 ZNF833PQ6ZTB9 187 aa9.11□□□□□ -0.95
SNX13-202ENST00000409604 RPP25LQ8N5L8 163 aaKnown RBP9.11□□□□□ -0.95
SNX13-202ENST00000409604 ZNF439Q8NDP4 499 aa9.11□□□□□ -0.95
SNX13-202ENST00000409604 OR1P1Q8NH06 330 aa9.11□□□□□ -0.95
SNX13-202ENST00000409604 FUT9Q9Y231 359 aa9.11□□□□□ -0.95
SNX13-202ENST00000409604 TBL2Q9Y4P3 447 aaKnown RBP9.11□□□□□ -0.95
SNX13-202ENST00000409604 TRAV30A0A087WSZ9 112 aa9.1□□□□□ -0.95
SNX13-202ENST00000409604 E7EUB6 86 aa9.1□□□□□ -0.95
SNX13-202ENST00000409604 C1orf229Q6ZS94 237 aaPredicted RBP9.1□□□□□ -0.95
SNX13-202ENST00000409604 DYNAPQ8N1N2 210 aa9.1□□□□□ -0.95
SNX13-202ENST00000409604 ELOVL1Q9BW60 279 aa9.1□□□□□ -0.95
SNX13-202ENST00000409604 F11RQ9Y624 299 aaKnown RBP9.1□□□□□ -0.95
SNX13-202ENST00000409604 TRAV8-1A0A0A6YYK1 113 aa9.1□□□□□ -0.95
SNX13-202ENST00000409604 C9JCJ5 164 aa9.1□□□□□ -0.95
SNX13-202ENST00000409604 SMIM17P0DL12 118 aa9.1□□□□□ -0.95
SNX13-202ENST00000409604 TCF23Q7RTU1 214 aa9.1□□□□□ -0.95
SNX13-202ENST00000409604 OR10J6PQ8NGY7 276 aa9.1□□□□□ -0.95
SNX13-202ENST00000409604 RNASEH2CQ8TDP1 164 aaKnown RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms