RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 IL19Q9UHD0 177 aa10.87□□□□□ -0.67
COL6A2-204ENST00000409416 TEX50A0A1B0GTY4 177 aa10.86□□□□□ -0.67
COL6A2-204ENST00000409416 MBD3L4A6NDZ8 208 aaPredicted RBP10.86□□□□□ -0.67
COL6A2-204ENST00000409416 MBD3L3A6NE82 208 aaPredicted RBP10.86□□□□□ -0.67
COL6A2-204ENST00000409416 MBD3L5A6NJ08 208 aaPredicted RBP10.86□□□□□ -0.67
COL6A2-204ENST00000409416 MBD3L2Q8NHZ7 208 aaPredicted RBP10.86□□□□□ -0.67
COL6A2-204ENST00000409416 ZNF596Q8TC21 504 aa10.86□□□□□ -0.67
COL6A2-204ENST00000409416 RNASE6Q93091 150 aaKnown RBP10.86□□□□□ -0.67
COL6A2-204ENST00000409416 C1orf159Q96HA4 380 aa10.86□□□□□ -0.67
COL6A2-204ENST00000409416 MCRIP2Q9BUT9 160 aaKnown RBP10.86□□□□□ -0.67
COL6A2-204ENST00000409416 ZNF430Q9H8G1 570 aaPredicted RBP10.86□□□□□ -0.67
COL6A2-204ENST00000409416 PRNDQ9UKY0 176 aa10.86□□□□□ -0.67
COL6A2-204ENST00000409416 E7EQL1 145 aa10.86□□□□□ -0.67
COL6A2-204ENST00000409416 SRIP30626 198 aa10.86□□□□□ -0.67
COL6A2-204ENST00000409416 PDLIM4P50479 330 aa10.86□□□□□ -0.67
COL6A2-204ENST00000409416 DEFB104AQ8WTQ1 72 aa10.86□□□□□ -0.67
COL6A2-204ENST00000409416 CORO2AQ92828 525 aa10.86□□□□□ -0.67
COL6A2-204ENST00000409416 SLC25A33Q9BSK2 321 aa10.86□□□□□ -0.67
COL6A2-204ENST00000409416 IGLV1-44P01699 117 aa10.85□□□□□ -0.67
COL6A2-204ENST00000409416 HINT1P49773 126 aaPredicted RBP10.85□□□□□ -0.67
COL6A2-204ENST00000409416 TAS2R45P59539 299 aa10.85□□□□□ -0.67
COL6A2-204ENST00000409416 IBA57Q5T440 356 aaKnown RBP10.85□□□□□ -0.67
COL6A2-204ENST00000409416 OR52E5Q8NH55 327 aa10.85□□□□□ -0.67
COL6A2-204ENST00000409416 IGKV1OR2-108A0A075B7D4 117 aa10.85□□□□□ -0.67
COL6A2-204ENST00000409416 PGPA6NDG6 321 aa10.85□□□□□ -0.67
COL6A2-204ENST00000409416 F2RL2O00254 374 aa10.85□□□□□ -0.67
COL6A2-204ENST00000409416 RPL19P84098 196 aaKnown RBP10.85□□□□□ -0.67
COL6A2-204ENST00000409416 OR1L4Q8NGR5 311 aa10.85□□□□□ -0.67
COL6A2-204ENST00000409416 OR1L8Q8NGR8 309 aa10.85□□□□□ -0.67
COL6A2-204ENST00000409416 SFXN3Q9BWM7 321 aa10.85□□□□□ -0.67
COL6A2-204ENST00000409416 LSM4Q9Y4Z0 139 aaKnown RBP10.85□□□□□ -0.67
COL6A2-204ENST00000409416 MFAP2P55001 183 aa10.84□□□□□ -0.67
COL6A2-204ENST00000409416 RIPPLY3P57055 190 aa10.84□□□□□ -0.67
COL6A2-204ENST00000409416 WNT10AQ9GZT5 417 aa10.84□□□□□ -0.67
COL6A2-204ENST00000409416 TMEM167BQ9NRX6 74 aa10.84□□□□□ -0.67
COL6A2-204ENST00000409416 TMEM14BQ9NUH8 114 aa10.84□□□□□ -0.67
COL6A2-204ENST00000409416 ZNF586Q9NXT0 402 aa10.84□□□□□ -0.67
COL6A2-204ENST00000409416 CTSZQ9UBR2 303 aa10.84□□□□□ -0.67
COL6A2-204ENST00000409416 PPIAL4CA0A0B4J2A2 164 aa10.84□□□□□ -0.67
COL6A2-204ENST00000409416 PRSS46E5RG02 174 aa10.84□□□□□ -0.67
COL6A2-204ENST00000409416 PPIAL4GP0DN37 164 aa10.84□□□□□ -0.67
COL6A2-204ENST00000409416 ECSCRQ19T08 205 aa10.84□□□□□ -0.67
COL6A2-204ENST00000409416 VMA21Q3ZAQ7 101 aa10.84□□□□□ -0.67
COL6A2-204ENST00000409416 NUDT11Q96G61 164 aa10.84□□□□□ -0.67
COL6A2-204ENST00000409416 RAB9BQ9NP90 201 aa10.84□□□□□ -0.67
COL6A2-204ENST00000409416 ZNF331Q9NQX6 463 aaPredicted RBP10.84□□□□□ -0.67
COL6A2-204ENST00000409416 GGTLC3B5MD39 225 aa10.84□□□□□ -0.67
COL6A2-204ENST00000409416 C10orf113Q5VZT2 155 aa10.84□□□□□ -0.67
COL6A2-204ENST00000409416 FOXA2Q9Y261 457 aaPredicted RBP10.84□□□□□ -0.67
COL6A2-204ENST00000409416 FN1P02751 2386 aaKnown RBP10.84□□□□□ -0.67
COL6A2-204ENST00000409416 RPL11P62913 178 aaKnown RBP10.83□□□□□ -0.68
COL6A2-204ENST00000409416 PMCHL1Q16048 86 aa10.83□□□□□ -0.68
COL6A2-204ENST00000409416 TBR1Q16650 682 aa10.83□□□□□ -0.68
COL6A2-204ENST00000409416 DNLZQ5SXM8 178 aa10.83□□□□□ -0.68
COL6A2-204ENST00000409416 TXNDC17Q9BRA2 123 aa10.83□□□□□ -0.68
COL6A2-204ENST00000409416 MRPL36Q9P0J6 103 aaKnown RBP10.83□□□□□ -0.68
COL6A2-204ENST00000409416 RPUSD1Q9UJJ7 312 aaKnown RBP10.83□□□□□ -0.68
COL6A2-204ENST00000409416 TBL2Q9Y4P3 447 aaKnown RBP10.83□□□□□ -0.68
COL6A2-204ENST00000409416 DIRC3C9JPN6 131 aa10.83□□□□□ -0.68
COL6A2-204ENST00000409416 UPK2O00526 184 aa10.83□□□□□ -0.68
COL6A2-204ENST00000409416 USF1P22415 310 aaPredicted RBP10.83□□□□□ -0.68
COL6A2-204ENST00000409416 RNASEKQ6P5S7 137 aaKnown RBP10.83□□□□□ -0.68
COL6A2-204ENST00000409416 LINC00305Q7Z4B0 112 aa10.83□□□□□ -0.68
COL6A2-204ENST00000409416 OR5B3Q8NH48 314 aa10.83□□□□□ -0.68
COL6A2-204ENST00000409416 DDB2Q92466 427 aa10.83□□□□□ -0.68
COL6A2-204ENST00000409416 DAZAP1Q96EP5 407 aaKnown RBP10.83□□□□□ -0.68
COL6A2-204ENST00000409416 ADTRPQ96IZ2 230 aa10.83□□□□□ -0.68
COL6A2-204ENST00000409416 CLEC5AQ9NY25 188 aa10.83□□□□□ -0.68
COL6A2-204ENST00000409416 SERTM2A0A1B0GWG4 89 aa10.83□□□□□ -0.68
COL6A2-204ENST00000409416 BRS3P32247 399 aa10.83□□□□□ -0.68
COL6A2-204ENST00000409416 RBX1P62877 108 aa10.83□□□□□ -0.68
COL6A2-204ENST00000409416 CDSNQ15517 529 aa10.83□□□□□ -0.68
COL6A2-204ENST00000409416 TMEM183BQ1AE95 376 aa10.83□□□□□ -0.68
COL6A2-204ENST00000409416 LDLRAD2Q5SZI1 272 aa10.83□□□□□ -0.68
COL6A2-204ENST00000409416 C1orf194Q5T5A4 169 aa10.83□□□□□ -0.68
COL6A2-204ENST00000409416 Q6ZN92 141 aa10.83□□□□□ -0.68
COL6A2-204ENST00000409416 ZNF439Q8NDP4 499 aa10.83□□□□□ -0.68
COL6A2-204ENST00000409416 NUDT10Q8NFP7 164 aa10.83□□□□□ -0.68
COL6A2-204ENST00000409416 DOPEY1Q5JWR5 2465 aa10.82□□□□□ -0.68
COL6A2-204ENST00000409416 GUSBP1Q15486 140 aa10.82□□□□□ -0.68
COL6A2-204ENST00000409416 PRNTQ86SH4 94 aa10.82□□□□□ -0.68
COL6A2-204ENST00000409416 PAXXQ9BUH6 204 aa10.82□□□□□ -0.68
COL6A2-204ENST00000409416 TMUB1Q9BVT8 246 aa10.82□□□□□ -0.68
COL6A2-204ENST00000409416 TP53TG3Q9ULZ0 132 aa10.82□□□□□ -0.68
COL6A2-204ENST00000409416 DSCAML1Q8TD84 2053 aa10.82□□□□□ -0.68
COL6A2-204ENST00000409416 THBDP07204 575 aa10.82□□□□□ -0.68
COL6A2-204ENST00000409416 PRCDQ00LT1 54 aa10.82□□□□□ -0.68
COL6A2-204ENST00000409416 Q56UQ5 140 aa10.82□□□□□ -0.68
COL6A2-204ENST00000409416 ZNF788Q6ZQV5 615 aa10.82□□□□□ -0.68
COL6A2-204ENST00000409416 RCHY1Q96PM5 261 aa10.82□□□□□ -0.68
COL6A2-204ENST00000409416 PMCHL2Q9BQD1 86 aa10.82□□□□□ -0.68
COL6A2-204ENST00000409416 V9GYV3 84 aa10.82□□□□□ -0.68
COL6A2-204ENST00000409416 FAM90A9PA6NNJ1 464 aa10.81□□□□□ -0.68
COL6A2-204ENST00000409416 C8orf88P0DMB2 117 aa10.81□□□□□ -0.68
COL6A2-204ENST00000409416 RPL27AP46776 148 aaKnown RBP10.81□□□□□ -0.68
COL6A2-204ENST00000409416 TCF24Q7RTU0 167 aa10.81□□□□□ -0.68
COL6A2-204ENST00000409416 CCL25O15444 150 aa10.81□□□□□ -0.68
COL6A2-204ENST00000409416 PRR20EP86478 221 aa10.81□□□□□ -0.68
COL6A2-204ENST00000409416 PRR20CP86479 221 aa10.81□□□□□ -0.68
COL6A2-204ENST00000409416 PRR20DP86480 221 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms