RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 C12orf77C9JDV5 145 aa10.18□□□□□ -0.78
SHANK2-203ENST00000409161 SPINK8P0C7L1 97 aa10.18□□□□□ -0.78
SHANK2-203ENST00000409161 ATXN7O15265 892 aaPredicted RBP10.18□□□□□ -0.78
SHANK2-203ENST00000409161 OR10W1Q8NGF6 305 aa10.18□□□□□ -0.78
SHANK2-203ENST00000409161 NLRC5Q86WI3 1866 aa10.18□□□□□ -0.78
SHANK2-203ENST00000409161 FGF16O43320 207 aa10.18□□□□□ -0.78
SHANK2-203ENST00000409161 EGR1P18146 543 aa10.18□□□□□ -0.78
SHANK2-203ENST00000409161 SPRED2Q7Z698 418 aa10.18□□□□□ -0.78
SHANK2-203ENST00000409161 TRBV6-7A0A0A0MS04 114 aa10.18□□□□□ -0.78
SHANK2-203ENST00000409161 ZNF497Q6ZNH5 498 aa10.18□□□□□ -0.78
SHANK2-203ENST00000409161 BRWD3Q6RI45 1802 aa10.18□□□□□ -0.78
SHANK2-203ENST00000409161 TMEM8BA6NDV4 472 aa10.18□□□□□ -0.78
SHANK2-203ENST00000409161 NEGR1Q7Z3B1 354 aa10.18□□□□□ -0.78
SHANK2-203ENST00000409161 GTSCR1Q86UQ5 136 aa10.18□□□□□ -0.78
SHANK2-203ENST00000409161 IGHV3-48P01763 117 aa10.17□□□□□ -0.78
SHANK2-203ENST00000409161 COX6A1P12074 109 aa10.17□□□□□ -0.78
SHANK2-203ENST00000409161 TNFRSF14Q92956 283 aa10.17□□□□□ -0.78
SHANK2-203ENST00000409161 SRXN1Q9BYN0 137 aa10.17□□□□□ -0.78
SHANK2-203ENST00000409161 LY6EQ16553 131 aa10.17□□□□□ -0.78
SHANK2-203ENST00000409161 OCIAD2Q56VL3 154 aa10.17□□□□□ -0.78
SHANK2-203ENST00000409161 EFEMP2O95967 443 aa10.17□□□□□ -0.78
SHANK2-203ENST00000409161 EFNB3Q15768 340 aa10.17□□□□□ -0.78
SHANK2-203ENST00000409161 ZXDCQ2QGD7 858 aaPredicted RBP10.17□□□□□ -0.78
SHANK2-203ENST00000409161 TPTE2P1Q5T6R2 138 aa10.17□□□□□ -0.78
SHANK2-203ENST00000409161 ZNRF1Q8ND25 227 aa10.17□□□□□ -0.78
SHANK2-203ENST00000409161 PRADC1Q9BSG0 188 aa10.17□□□□□ -0.78
SHANK2-203ENST00000409161 MRPS18CQ9Y3D5 142 aaKnown RBP10.17□□□□□ -0.78
SHANK2-203ENST00000409161 BCL6BQ8N143 479 aaPredicted RBP10.17□□□□□ -0.78
SHANK2-203ENST00000409161 R3HDMLQ9H3Y0 253 aa10.17□□□□□ -0.78
SHANK2-203ENST00000409161 MSGN1A6NI15 193 aa10.17□□□□□ -0.78
SHANK2-203ENST00000409161 C17orf98A8MV24 154 aa10.17□□□□□ -0.78
SHANK2-203ENST00000409161 AMBPP02760 352 aa10.17□□□□□ -0.78
SHANK2-203ENST00000409161 SP9P0CG40 484 aa10.17□□□□□ -0.78
SHANK2-203ENST00000409161 LINC00158P58513 81 aa10.17□□□□□ -0.78
SHANK2-203ENST00000409161 TEX43Q6ZNM6 134 aa10.17□□□□□ -0.78
SHANK2-203ENST00000409161 REPIN1Q9BWE0 567 aaKnown RBP10.17□□□□□ -0.78
SHANK2-203ENST00000409161 SORL1Q92673 2214 aa10.16□□□□□ -0.78
SHANK2-203ENST00000409161 TRAV14DV4A0A0A6YYC5 116 aa10.16□□□□□ -0.78
SHANK2-203ENST00000409161 MLNRO43193 412 aa10.16□□□□□ -0.78
SHANK2-203ENST00000409161 IGFBP3P17936 291 aaPredicted RBP10.16□□□□□ -0.78
SHANK2-203ENST00000409161 IGLV3-21P80748 117 aaPredicted RBP10.16□□□□□ -0.78
SHANK2-203ENST00000409161 IQCF6A8MYZ5 107 aa10.16□□□□□ -0.78
SHANK2-203ENST00000409161 ITGBL1O95965 494 aaPredicted RBP10.16□□□□□ -0.78
SHANK2-203ENST00000409161 GATD1Q8NB37 220 aa10.16□□□□□ -0.78
SHANK2-203ENST00000409161 ZIC3O60481 467 aa10.16□□□□□ -0.78
SHANK2-203ENST00000409161 LHX2P50458 406 aa10.16□□□□□ -0.78
SHANK2-203ENST00000409161 RASL10AQ92737 203 aa10.16□□□□□ -0.78
SHANK2-203ENST00000409161 RPP25Q9BUL9 199 aaKnown RBP10.16□□□□□ -0.78
SHANK2-203ENST00000409161 RSPO3Q9BXY4 272 aaPredicted RBP10.16□□□□□ -0.78
SHANK2-203ENST00000409161 PRCDQ00LT1 54 aa10.16□□□□□ -0.78
SHANK2-203ENST00000409161 ZNF48Q96MX3 618 aaPredicted RBP10.16□□□□□ -0.78
SHANK2-203ENST00000409161 RNF126Q9BV68 326 aa10.16□□□□□ -0.78
SHANK2-203ENST00000409161 SIGLEC15Q6ZMC9 328 aa10.15□□□□□ -0.78
SHANK2-203ENST00000409161 HAX1O00165 279 aa10.15□□□□□ -0.78
SHANK2-203ENST00000409161 SAA2-SAA4A0A096LPE2 208 aa10.15□□□□□ -0.78
SHANK2-203ENST00000409161 SAA2P0DJI9 122 aaPredicted RBP10.15□□□□□ -0.78
SHANK2-203ENST00000409161 SMIM10L1P0DMW3 83 aa10.15□□□□□ -0.78
SHANK2-203ENST00000409161 CEACAM1P13688 526 aa10.15□□□□□ -0.78
SHANK2-203ENST00000409161 C9orf50Q5SZB4 431 aa10.15□□□□□ -0.78
SHANK2-203ENST00000409161 SMIM10Q96HG1 83 aa10.15□□□□□ -0.78
SHANK2-203ENST00000409161 MYMXA0A1B0GTQ4 84 aa10.15□□□□□ -0.78
SHANK2-203ENST00000409161 RBMY1FQ15415 496 aaKnown RBP10.15□□□□□ -0.78
SHANK2-203ENST00000409161 C9orf153Q5TBE3 101 aa10.15□□□□□ -0.78
SHANK2-203ENST00000409161 SFTA2Q6UW10 78 aa10.15□□□□□ -0.78
SHANK2-203ENST00000409161 FBXL15Q9H469 300 aa10.15□□□□□ -0.78
SHANK2-203ENST00000409161 GUSBP1Q15486 140 aa10.15□□□□□ -0.78
SHANK2-203ENST00000409161 GTSF1LQ9H1H1 148 aa10.15□□□□□ -0.78
SHANK2-203ENST00000409161 AGRNO00468 2067 aa10.15□□□□□ -0.78
SHANK2-203ENST00000409161 PRR32B1ATL7 298 aa10.15□□□□□ -0.78
SHANK2-203ENST00000409161 CLEC19AQ6UXS0 136 aa10.15□□□□□ -0.78
SHANK2-203ENST00000409161 GGTLC1Q9BX51 225 aa10.15□□□□□ -0.78
SHANK2-203ENST00000409161 PSG8Q9UQ74 426 aa10.15□□□□□ -0.78
SHANK2-203ENST00000409161 KIR3DS1Q14943 382 aa10.15□□□□□ -0.79
SHANK2-203ENST00000409161 TRGV4A0A0C4DH28 118 aa10.14□□□□□ -0.79
SHANK2-203ENST00000409161 A0A0G2JK05 382 aa10.14□□□□□ -0.79
SHANK2-203ENST00000409161 VCYO14598 125 aa10.14□□□□□ -0.79
SHANK2-203ENST00000409161 PAX4O43316 350 aa10.14□□□□□ -0.79
SHANK2-203ENST00000409161 TBX6O95947 436 aaPredicted RBP10.14□□□□□ -0.79
SHANK2-203ENST00000409161 PLSCR4Q9NRQ2 329 aa10.14□□□□□ -0.79
SHANK2-203ENST00000409161 PMVKQ15126 192 aa10.14□□□□□ -0.79
SHANK2-203ENST00000409161 ATRAIDQ6UW56 229 aa10.14□□□□□ -0.79
SHANK2-203ENST00000409161 SLC22A18ASQ8N1D0 253 aa10.14□□□□□ -0.79
SHANK2-203ENST00000409161 GFRA4Q9GZZ7 299 aa10.14□□□□□ -0.79
SHANK2-203ENST00000409161 BOD1L2Q8IYS8 172 aa10.14□□□□□ -0.79
SHANK2-203ENST00000409161 SPG11Q96JI7 2443 aa10.14□□□□□ -0.79
SHANK2-203ENST00000409161 LYPD1Q8N2G4 141 aa10.14□□□□□ -0.79
SHANK2-203ENST00000409161 A0A1W2PQF6 199 aa10.14□□□□□ -0.79
SHANK2-203ENST00000409161 CD5LO43866 347 aa10.14□□□□□ -0.79
SHANK2-203ENST00000409161 SELLP14151 372 aa10.13□□□□□ -0.79
SHANK2-203ENST00000409161 VDAC2P45880 294 aaPredicted RBP10.13□□□□□ -0.79
SHANK2-203ENST00000409161 OCC1Q8TAD7 63 aa10.13□□□□□ -0.79
SHANK2-203ENST00000409161 UBE2WQ96B02 151 aa10.13□□□□□ -0.79
SHANK2-203ENST00000409161 C2orf16Q68DN1 1984 aa10.13□□□□□ -0.79
SHANK2-203ENST00000409161 SYS1-DBNDD2H3BUS1 97 aa10.13□□□□□ -0.79
SHANK2-203ENST00000409161 FAM168AQ92567 244 aa10.13□□□□□ -0.79
SHANK2-203ENST00000409161 ZNF362Q5T0B9 420 aaPredicted RBP10.13□□□□□ -0.79
SHANK2-203ENST00000409161 ALPK3Q96L96 1907 aa10.13□□□□□ -0.79
SHANK2-203ENST00000409161 F8W1H4 67 aa10.13□□□□□ -0.79
SHANK2-203ENST00000409161 CCL1P22362 96 aa10.13□□□□□ -0.79
SHANK2-203ENST00000409161 RPL32P62910 135 aaKnown RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms