RNA–Protein interactions for RNA: ENST00000407298.7

APOBEC3B-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,282 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-204ENST00000407298 SDHCQ99643 169 aaPredicted RBP8.85□□□□□ -0.99
APOBEC3B-204ENST00000407298 FNDC4Q9H6D8 234 aaPredicted RBP8.85□□□□□ -0.99
APOBEC3B-204ENST00000407298 KNCNA6PVL3 124 aa8.84□□□□□ -0.99
APOBEC3B-204ENST00000407298 ZNF688P0C7X2 276 aa8.84□□□□□ -0.99
APOBEC3B-204ENST00000407298 SNCAP37840 140 aa8.84□□□□□ -0.99
APOBEC3B-204ENST00000407298 SUB1P53999 127 aaKnown RBP eCLIP8.84□□□□□ -0.99
APOBEC3B-204ENST00000407298 SPCS3P61009 180 aa8.84□□□□□ -0.99
APOBEC3B-204ENST00000407298 BAK1Q16611 211 aa8.84□□□□□ -0.99
APOBEC3B-204ENST00000407298 ACTL10Q5JWF8 245 aa8.84□□□□□ -0.99
APOBEC3B-204ENST00000407298 CSNK1G2-AS1Q8NCQ2 148 aa8.84□□□□□ -0.99
APOBEC3B-204ENST00000407298 ZFAND3Q9H8U3 227 aa8.84□□□□□ -0.99
APOBEC3B-204ENST00000407298 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.84□□□□□ -0.99
APOBEC3B-204ENST00000407298 ABCA13Q86UQ4 5058 aa8.84□□□□□ -0.99
APOBEC3B-204ENST00000407298 AGRNO00468 2067 aa8.84□□□□□ -0.99
APOBEC3B-204ENST00000407298 TMEM189A5PLL7 270 aa8.83□□□□□ -1
APOBEC3B-204ENST00000407298 CORTO00230 105 aa8.83□□□□□ -1
APOBEC3B-204ENST00000407298 TMEM50AO95807 157 aa8.83□□□□□ -1
APOBEC3B-204ENST00000407298 SPART-AS1P0CW21 52 aa8.83□□□□□ -1
APOBEC3B-204ENST00000407298 AKR1C4P17516 323 aa8.83□□□□□ -1
APOBEC3B-204ENST00000407298 C4BPBP20851 252 aa8.83□□□□□ -1
APOBEC3B-204ENST00000407298 CRYBB3P26998 211 aa8.83□□□□□ -1
APOBEC3B-204ENST00000407298 FAUP35544 74 aaKnown RBP8.83□□□□□ -1
APOBEC3B-204ENST00000407298 P2RY1P47900 373 aa8.83□□□□□ -1
APOBEC3B-204ENST00000407298 AP2S1P53680 142 aaPredicted RBP8.83□□□□□ -1
APOBEC3B-204ENST00000407298 AP3S2P59780 193 aa8.83□□□□□ -1
APOBEC3B-204ENST00000407298 LYZL2Q7Z4W2 148 aa8.83□□□□□ -1
APOBEC3B-204ENST00000407298 DEDD2Q8WXF8 326 aa8.83□□□□□ -1
APOBEC3B-204ENST00000407298 SCGB3A2Q96PL1 93 aa8.83□□□□□ -1
APOBEC3B-204ENST00000407298 PDCD10Q9BUL8 212 aa8.83□□□□□ -1
APOBEC3B-204ENST00000407298 CLEC5AQ9NY25 188 aa8.83□□□□□ -1
APOBEC3B-204ENST00000407298 CELA1Q9UNI1 258 aa8.83□□□□□ -1
APOBEC3B-204ENST00000407298 DNAH11Q96DT5 4516 aa8.83□□□□□ -1
APOBEC3B-204ENST00000407298 A0A0B4J2A0 478 aa8.82□□□□□ -1
APOBEC3B-204ENST00000407298 TEX48A0A1B0GUV7 120 aa8.82□□□□□ -1
APOBEC3B-204ENST00000407298 HELTA6NFD8 242 aa8.82□□□□□ -1
APOBEC3B-204ENST00000407298 NXPH3O95157 252 aa8.82□□□□□ -1
APOBEC3B-204ENST00000407298 MLANAQ16655 118 aa8.82□□□□□ -1
APOBEC3B-204ENST00000407298 RNF212Q495C1 297 aa8.82□□□□□ -1
APOBEC3B-204ENST00000407298 SPANXN2Q5MJ10 180 aa8.82□□□□□ -1
APOBEC3B-204ENST00000407298 C1orf134Q5TEV5 83 aa8.82□□□□□ -1
APOBEC3B-204ENST00000407298 Q6ZR54 194 aa8.82□□□□□ -1
APOBEC3B-204ENST00000407298 ZNF767PQ75MW2 155 aa8.82□□□□□ -1
APOBEC3B-204ENST00000407298 TMED4Q7Z7H5 227 aa8.82□□□□□ -1
APOBEC3B-204ENST00000407298 RAB40CQ96S21 281 aa8.82□□□□□ -1
APOBEC3B-204ENST00000407298 SHPKQ9UHJ6 478 aa8.82□□□□□ -1
APOBEC3B-204ENST00000407298 DYNC1H1Q14204 4646 aaKnown RBP8.81□□□□□ -1
APOBEC3B-204ENST00000407298 A0A1B0GU03 582 aa8.81□□□□□ -1
APOBEC3B-204ENST00000407298 SMIM9A6NGZ8 99 aa8.81□□□□□ -1
APOBEC3B-204ENST00000407298 SULT1A3P0DMM9 295 aa8.81□□□□□ -1
APOBEC3B-204ENST00000407298 SULT1A4P0DMN0 295 aa8.81□□□□□ -1
APOBEC3B-204ENST00000407298 BTCP35070 178 aa8.81□□□□□ -1
APOBEC3B-204ENST00000407298 SNRPD3P62318 126 aaKnown RBP8.81□□□□□ -1
APOBEC3B-204ENST00000407298 LCE2AQ5TA79 106 aaPredicted RBP8.81□□□□□ -1
APOBEC3B-204ENST00000407298 DCANP1Q8TF63 244 aa8.81□□□□□ -1
APOBEC3B-204ENST00000407298 NEU1Q99519 415 aa8.81□□□□□ -1
APOBEC3B-204ENST00000407298 SEPSECSQ9HD40 501 aaKnown RBP8.81□□□□□ -1
APOBEC3B-204ENST00000407298 HSPB7Q9UBY9 170 aa8.81□□□□□ -1
APOBEC3B-204ENST00000407298 KCNIP3Q9Y2W7 256 aa8.81□□□□□ -1
APOBEC3B-204ENST00000407298 IGLV2-18A0A075B6J9 118 aa8.8□□□□□ -1
APOBEC3B-204ENST00000407298 TRAV30A0A087WSZ9 112 aa8.8□□□□□ -1
APOBEC3B-204ENST00000407298 PITX3O75364 302 aa8.8□□□□□ -1
APOBEC3B-204ENST00000407298 CLN5O75503 358 aa8.8□□□□□ -1
APOBEC3B-204ENST00000407298 IGKV1-17P01599 117 aa8.8□□□□□ -1
APOBEC3B-204ENST00000407298 OPRK1P41145 380 aa8.8□□□□□ -1
APOBEC3B-204ENST00000407298 CCR6P51684 374 aa8.8□□□□□ -1
APOBEC3B-204ENST00000407298 SRPXP78539 464 aa8.8□□□□□ -1
APOBEC3B-204ENST00000407298 DHRS2Q13268 280 aa8.8□□□□□ -1
APOBEC3B-204ENST00000407298 PPP1R1AQ13522 171 aa8.8□□□□□ -1
APOBEC3B-204ENST00000407298 SMCO1Q147U7 214 aa8.8□□□□□ -1
APOBEC3B-204ENST00000407298 C2orf83Q53S99 150 aa8.8□□□□□ -1
APOBEC3B-204ENST00000407298 TMEM128Q5BJH2 165 aa8.8□□□□□ -1
APOBEC3B-204ENST00000407298 PSMG4Q5JS54 123 aa8.8□□□□□ -1
APOBEC3B-204ENST00000407298 ZNF575Q86XF7 245 aa8.8□□□□□ -1
APOBEC3B-204ENST00000407298 LGI3Q8N145 548 aa8.8□□□□□ -1
APOBEC3B-204ENST00000407298 LRTM2Q8N967 370 aa8.8□□□□□ -1
APOBEC3B-204ENST00000407298 SLC24A4Q8NFF2 622 aa8.8□□□□□ -1
APOBEC3B-204ENST00000407298 OR4X1Q8NH49 305 aa8.8□□□□□ -1
APOBEC3B-204ENST00000407298 SLC25A21Q9BQT8 299 aaPredicted RBP8.8□□□□□ -1
APOBEC3B-204ENST00000407298 KRTAP4-5Q9BYR2 181 aa8.8□□□□□ -1
APOBEC3B-204ENST00000407298 ENY2Q9NPA8 101 aa8.8□□□□□ -1
APOBEC3B-204ENST00000407298 HEYLQ9NQ87 328 aaPredicted RBP8.8□□□□□ -1
APOBEC3B-204ENST00000407298 CEBPZOSA8MTT3 80 aa8.79□□□□□ -1
APOBEC3B-204ENST00000407298 CDK2AP2O75956 126 aa8.79□□□□□ -1
APOBEC3B-204ENST00000407298 ANXA3P12429 323 aa8.79□□□□□ -1
APOBEC3B-204ENST00000407298 HTR2BP41595 481 aa8.79□□□□□ -1
APOBEC3B-204ENST00000407298 PRSS54Q6PEW0 395 aa8.79□□□□□ -1
APOBEC3B-204ENST00000407298 RBKSQ9H477 322 aa8.79□□□□□ -1
APOBEC3B-204ENST00000407298 XCL2Q9UBD3 114 aa8.79□□□□□ -1
APOBEC3B-204ENST00000407298 DUXBA0A1W2PPF3 345 aa8.78□□□□□ -1
APOBEC3B-204ENST00000407298 C16orf90A8MZG2 172 aa8.78□□□□□ -1
APOBEC3B-204ENST00000407298 NDUFB6O95139 128 aa8.78□□□□□ -1
APOBEC3B-204ENST00000407298 SFT2D2O95562 160 aa8.78□□□□□ -1
APOBEC3B-204ENST00000407298 IGLC1P0CG04 106 aa8.78□□□□□ -1
APOBEC3B-204ENST00000407298 IL7P13232 177 aa8.78□□□□□ -1
APOBEC3B-204ENST00000407298 VAMP1P23763 118 aa8.78□□□□□ -1
APOBEC3B-204ENST00000407298 FAM3BP58499 235 aaPredicted RBP8.78□□□□□ -1
APOBEC3B-204ENST00000407298 TIGITQ495A1 244 aa8.78□□□□□ -1
APOBEC3B-204ENST00000407298 TRIQKQ629K1 86 aa8.78□□□□□ -1
APOBEC3B-204ENST00000407298 FLVCR2Q9UPI3 526 aa8.78□□□□□ -1
APOBEC3B-204ENST00000407298 RPS10-NUDT3A0A1W2PQS6 291 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms