RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 SEPSECSQ9HD40 501 aaKnown RBP10.3□□□□□ -0.76
SMARCB1-203ENST00000407082 HELTA6NFD8 242 aa10.29□□□□□ -0.76
SMARCB1-203ENST00000407082 OR7C2O60412 319 aa10.29□□□□□ -0.76
SMARCB1-203ENST00000407082 HIST1H2BKO60814 126 aa10.29□□□□□ -0.76
SMARCB1-203ENST00000407082 FOXH1O75593 365 aa10.29□□□□□ -0.76
SMARCB1-203ENST00000407082 HIST1H2BJP06899 126 aa10.29□□□□□ -0.76
SMARCB1-203ENST00000407082 TRGC1P0CF51 173 aa10.29□□□□□ -0.76
SMARCB1-203ENST00000407082 HIST1H2BOP23527 126 aa10.29□□□□□ -0.76
SMARCB1-203ENST00000407082 ZFP36P26651 326 aaKnown RBP10.29□□□□□ -0.76
SMARCB1-203ENST00000407082 HIST1H2BBP33778 126 aa10.29□□□□□ -0.76
SMARCB1-203ENST00000407082 HIST1H2BDP58876 126 aa10.29□□□□□ -0.76
SMARCB1-203ENST00000407082 HIST1H2BCP62807 126 aa10.29□□□□□ -0.76
SMARCB1-203ENST00000407082 HIST2H2BEQ16778 126 aa10.29□□□□□ -0.76
SMARCB1-203ENST00000407082 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.29□□□□□ -0.76
SMARCB1-203ENST00000407082 PRR31Q5SQ13 230 aa10.29□□□□□ -0.76
SMARCB1-203ENST00000407082 C10orf113Q5VZT2 155 aa10.29□□□□□ -0.76
SMARCB1-203ENST00000407082 PVRIGQ6DKI7 326 aa10.29□□□□□ -0.76
SMARCB1-203ENST00000407082 MIR17HGQ75NE6 70 aa10.29□□□□□ -0.76
SMARCB1-203ENST00000407082 C11orf42Q8N5U0 333 aa10.29□□□□□ -0.76
SMARCB1-203ENST00000407082 OR10W1Q8NGF6 305 aa10.29□□□□□ -0.76
SMARCB1-203ENST00000407082 OR1P1Q8NH06 330 aa10.29□□□□□ -0.76
SMARCB1-203ENST00000407082 HIST1H2BHQ93079 126 aa10.29□□□□□ -0.76
SMARCB1-203ENST00000407082 TRGV9Q99603 122 aa10.29□□□□□ -0.76
SMARCB1-203ENST00000407082 HIST1H2BNQ99877 126 aa10.29□□□□□ -0.76
SMARCB1-203ENST00000407082 HIST1H2BMQ99879 126 aa10.29□□□□□ -0.76
SMARCB1-203ENST00000407082 SLC25A33Q9BSK2 321 aa10.29□□□□□ -0.76
SMARCB1-203ENST00000407082 ZNRD1Q9P1U0 126 aa10.29□□□□□ -0.76
SMARCB1-203ENST00000407082 LOC105371242A0A075B767 164 aa10.28□□□□□ -0.76
SMARCB1-203ENST00000407082 OOSP1A8MZH6 123 aa10.28□□□□□ -0.76
SMARCB1-203ENST00000407082 CRYGBP07316 175 aa10.28□□□□□ -0.76
SMARCB1-203ENST00000407082 MSMBP08118 114 aa10.28□□□□□ -0.76
SMARCB1-203ENST00000407082 NPPCP23582 126 aa10.28□□□□□ -0.76
SMARCB1-203ENST00000407082 HTR1DP28221 377 aa10.28□□□□□ -0.76
SMARCB1-203ENST00000407082 TAS2R60P59551 318 aa10.28□□□□□ -0.76
SMARCB1-203ENST00000407082 SCGB2A2Q13296 93 aa10.28□□□□□ -0.76
SMARCB1-203ENST00000407082 TNXAQ16473 311 aa10.28□□□□□ -0.76
SMARCB1-203ENST00000407082 TIGITQ495A1 244 aa10.28□□□□□ -0.76
SMARCB1-203ENST00000407082 DNLZQ5SXM8 178 aa10.28□□□□□ -0.76
SMARCB1-203ENST00000407082 PPP1R27Q86WC6 154 aa10.28□□□□□ -0.76
SMARCB1-203ENST00000407082 KIR3DL3Q8N743 410 aa10.28□□□□□ -0.76
SMARCB1-203ENST00000407082 CHRDL1Q9BU40 450 aa10.28□□□□□ -0.76
SMARCB1-203ENST00000407082 DPM3Q9P2X0 92 aa10.28□□□□□ -0.76
SMARCB1-203ENST00000407082 ONECUT1Q9UBC0 465 aa10.28□□□□□ -0.76
SMARCB1-203ENST00000407082 SIGLEC9Q9Y336 463 aa10.28□□□□□ -0.76
SMARCB1-203ENST00000407082 ARHGAP32A7KAX9 2087 aa10.27□□□□□ -0.76
SMARCB1-203ENST00000407082 SCO2A0A1W2PP80 73 aa10.27□□□□□ -0.77
SMARCB1-203ENST00000407082 A0A1W2PPQ1 181 aa10.27□□□□□ -0.77
SMARCB1-203ENST00000407082 GNG4P50150 75 aa10.27□□□□□ -0.77
SMARCB1-203ENST00000407082 WT1-ASQ06250 92 aa10.27□□□□□ -0.77
SMARCB1-203ENST00000407082 SPATA31B1PQ5VZV4 182 aa10.27□□□□□ -0.77
SMARCB1-203ENST00000407082 CCDC144NLQ6NUI1 221 aa10.27□□□□□ -0.77
SMARCB1-203ENST00000407082 NECAP1Q8NC96 275 aa10.27□□□□□ -0.77
SMARCB1-203ENST00000407082 OR5T1Q8NG75 326 aa10.27□□□□□ -0.77
SMARCB1-203ENST00000407082 OR11H6Q8NGC7 330 aa10.27□□□□□ -0.77
SMARCB1-203ENST00000407082 NPIPB3Q92617 1050 aa10.27□□□□□ -0.77
SMARCB1-203ENST00000407082 FRZBQ92765 325 aa10.27□□□□□ -0.77
SMARCB1-203ENST00000407082 POLR3KQ9Y2Y1 108 aaPredicted RBP10.27□□□□□ -0.77
SMARCB1-203ENST00000407082 YTHDF2Q9Y5A9 579 aaKnown RBP10.27□□□□□ -0.77
SMARCB1-203ENST00000407082 TRAV20A0A0B4J274 112 aa10.26□□□□□ -0.77
SMARCB1-203ENST00000407082 A0A1W2PPI3 338 aa10.26□□□□□ -0.77
SMARCB1-203ENST00000407082 CRYGCP07315 174 aa10.26□□□□□ -0.77
SMARCB1-203ENST00000407082 DEFA4P12838 97 aa10.26□□□□□ -0.77
SMARCB1-203ENST00000407082 PLGLAQ15195 96 aa10.26□□□□□ -0.77
SMARCB1-203ENST00000407082 TPTE2P1Q5T6R2 138 aa10.26□□□□□ -0.77
SMARCB1-203ENST00000407082 TMEM116Q8NCL8 245 aa10.26□□□□□ -0.77
SMARCB1-203ENST00000407082 OR4X1Q8NH49 305 aa10.26□□□□□ -0.77
SMARCB1-203ENST00000407082 PAXXQ9BUH6 204 aa10.26□□□□□ -0.77
SMARCB1-203ENST00000407082 HIF1ANQ9NWT6 349 aa10.26□□□□□ -0.77
SMARCB1-203ENST00000407082 RNF24Q9Y225 148 aa10.26□□□□□ -0.77
SMARCB1-203ENST00000407082 WNK2Q9Y3S1 2297 aa10.25□□□□□ -0.77
SMARCB1-203ENST00000407082 IGKV1OR2-108A0A075B7D4 117 aa10.25□□□□□ -0.77
SMARCB1-203ENST00000407082 TRBV9A0A0B4J1U6 114 aa10.25□□□□□ -0.77
SMARCB1-203ENST00000407082 A0A0U1RQK1 487 aa10.25□□□□□ -0.77
SMARCB1-203ENST00000407082 IGLC7A0M8Q6 106 aa10.25□□□□□ -0.77
SMARCB1-203ENST00000407082 ZNF320A2RRD8 509 aa10.25□□□□□ -0.77
SMARCB1-203ENST00000407082 C22orf46C9J442 243 aa10.25□□□□□ -0.77
SMARCB1-203ENST00000407082 LY6LH3BQJ8 138 aa10.25□□□□□ -0.77
SMARCB1-203ENST00000407082 SCGB2A1O75556 95 aa10.25□□□□□ -0.77
SMARCB1-203ENST00000407082 OR10J4P0C629 311 aa10.25□□□□□ -0.77
SMARCB1-203ENST00000407082 PRTN3P24158 256 aa10.25□□□□□ -0.77
SMARCB1-203ENST00000407082 CNN1P51911 297 aaKnown RBP10.25□□□□□ -0.77
SMARCB1-203ENST00000407082 UBE2L3P68036 154 aaKnown RBP10.25□□□□□ -0.77
SMARCB1-203ENST00000407082 DIAPH2-AS1Q14236 149 aa10.25□□□□□ -0.77
SMARCB1-203ENST00000407082 SHISA2Q6UWI4 295 aa10.25□□□□□ -0.77
SMARCB1-203ENST00000407082 TMEM183AQ8IXX5 376 aa10.25□□□□□ -0.77
SMARCB1-203ENST00000407082 OR2T6Q8NHC8 308 aa10.25□□□□□ -0.77
SMARCB1-203ENST00000407082 OCC1Q8TAD7 63 aa10.25□□□□□ -0.77
SMARCB1-203ENST00000407082 MISP3Q96FF7 219 aa10.25□□□□□ -0.77
SMARCB1-203ENST00000407082 EAF1Q96JC9 268 aaPredicted RBP10.25□□□□□ -0.77
SMARCB1-203ENST00000407082 JMJD8Q96S16 334 aa10.25□□□□□ -0.77
SMARCB1-203ENST00000407082 OR51M1Q9H341 326 aa10.25□□□□□ -0.77
SMARCB1-203ENST00000407082 OSTCQ9NRP0 149 aa10.25□□□□□ -0.77
SMARCB1-203ENST00000407082 TNFRSF19Q9NS68 423 aa10.25□□□□□ -0.77
SMARCB1-203ENST00000407082 IL36BQ9NZH7 164 aa10.25□□□□□ -0.77
SMARCB1-203ENST00000407082 F11RQ9Y624 299 aaKnown RBP10.25□□□□□ -0.77
SMARCB1-203ENST00000407082 IGHV2-70DA0A0C4DH43 119 aa10.24□□□□□ -0.77
SMARCB1-203ENST00000407082 PCP4L1A6NKN8 68 aa10.24□□□□□ -0.77
SMARCB1-203ENST00000407082 CGB1A6NKQ9 187 aa10.24□□□□□ -0.77
SMARCB1-203ENST00000407082 GATA3P23771 443 aa10.24□□□□□ -0.77
SMARCB1-203ENST00000407082 COX7A1P24310 79 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms