RNA–Protein interactions for RNA: ENST00000405375.5

CDKN1A-203, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-203ENST00000405375 TMEM183BQ1AE95 376 aa12.91□□□□□ -0.34
CDKN1A-203ENST00000405375 TMEM136Q6ZRR5 245 aa12.91□□□□□ -0.34
CDKN1A-203ENST00000405375 MBD6Q96DN6 1003 aa12.91□□□□□ -0.34
CDKN1A-203ENST00000405375 TIMD4Q96H15 378 aa12.91□□□□□ -0.34
CDKN1A-203ENST00000405375 EPDR1Q9UM22 224 aa12.91□□□□□ -0.34
CDKN1A-203ENST00000405375 ZNF705GA8MUZ8 300 aaPredicted RBP12.91□□□□□ -0.34
CDKN1A-203ENST00000405375 SPINK4O60575 86 aa12.91□□□□□ -0.34
CDKN1A-203ENST00000405375 NBEAP1P0C6P0 100 aa12.91□□□□□ -0.34
CDKN1A-203ENST00000405375 DEFA6Q01524 100 aa12.91□□□□□ -0.34
CDKN1A-203ENST00000405375 WDR73Q6P4I2 378 aa12.91□□□□□ -0.34
CDKN1A-203ENST00000405375 ZNF664Q8N3J9 261 aa12.91□□□□□ -0.34
CDKN1A-203ENST00000405375 CMTM2Q8TAZ6 248 aa12.91□□□□□ -0.34
CDKN1A-203ENST00000405375 CFHR4Q92496 578 aa12.91□□□□□ -0.34
CDKN1A-203ENST00000405375 FAM168AQ92567 244 aa12.91□□□□□ -0.34
CDKN1A-203ENST00000405375 C7orf69Q9H7B7 122 aa12.91□□□□□ -0.34
CDKN1A-203ENST00000405375 DPM3Q9P2X0 92 aa12.91□□□□□ -0.34
CDKN1A-203ENST00000405375 KLF12Q9Y4X4 402 aa12.91□□□□□ -0.34
CDKN1A-203ENST00000405375 TACC2O95359 2948 aa12.9□□□□□ -0.34
CDKN1A-203ENST00000405375 GATCO43716 136 aaKnown RBP12.9□□□□□ -0.34
CDKN1A-203ENST00000405375 CA1P00915 261 aaPredicted RBP12.9□□□□□ -0.34
CDKN1A-203ENST00000405375 RAB4BP61018 213 aa12.9□□□□□ -0.34
CDKN1A-203ENST00000405375 SLC35B1P78383 322 aa12.9□□□□□ -0.34
CDKN1A-203ENST00000405375 Q0VG73 95 aa12.9□□□□□ -0.34
CDKN1A-203ENST00000405375 COX19Q49B96 90 aa12.9□□□□□ -0.34
CDKN1A-203ENST00000405375 BLNKQ8WV28 456 aa12.9□□□□□ -0.34
CDKN1A-203ENST00000405375 SERTAD4Q9NUC0 356 aa12.9□□□□□ -0.34
CDKN1A-203ENST00000405375 NAT8BQ9UHF3 227 aa12.9□□□□□ -0.34
CDKN1A-203ENST00000405375 PLGLAQ15195 96 aa12.9□□□□□ -0.35
CDKN1A-203ENST00000405375 MMDQ15546 238 aa12.9□□□□□ -0.35
CDKN1A-203ENST00000405375 ASPHD1Q5U4P2 390 aa12.9□□□□□ -0.35
CDKN1A-203ENST00000405375 C14orf144Q96I85 54 aa12.9□□□□□ -0.35
CDKN1A-203ENST00000405375 WNT10AQ9GZT5 417 aa12.9□□□□□ -0.35
CDKN1A-203ENST00000405375 HRNRQ86YZ3 2850 aaPredicted RBP12.89□□□□□ -0.35
CDKN1A-203ENST00000405375 ODF3BA8MYP8 253 aa12.89□□□□□ -0.35
CDKN1A-203ENST00000405375 M0R1W7 72 aa12.89□□□□□ -0.35
CDKN1A-203ENST00000405375 SERF1AO75920 110 aa12.89□□□□□ -0.35
CDKN1A-203ENST00000405375 PSG1P11464 419 aa12.89□□□□□ -0.35
CDKN1A-203ENST00000405375 IQCJQ1A5X6 159 aa12.89□□□□□ -0.35
CDKN1A-203ENST00000405375 UNQ6494/PRO21346Q6UXR6 183 aa12.89□□□□□ -0.35
CDKN1A-203ENST00000405375 IZUMO1RA6ND01 250 aa12.88□□□□□ -0.35
CDKN1A-203ENST00000405375 PGPA6NDG6 321 aa12.88□□□□□ -0.35
CDKN1A-203ENST00000405375 SLC25A5P05141 298 aaKnown RBP12.88□□□□□ -0.35
CDKN1A-203ENST00000405375 LEMD1Q68G75 181 aa12.88□□□□□ -0.35
CDKN1A-203ENST00000405375 NEU4Q8WWR8 484 aaPredicted RBP12.88□□□□□ -0.35
CDKN1A-203ENST00000405375 MS4A10Q96PG2 267 aa12.88□□□□□ -0.35
CDKN1A-203ENST00000405375 SSBP3Q9BWW4 388 aaPredicted RBP12.88□□□□□ -0.35
CDKN1A-203ENST00000405375 LOC105371242A0A075B767 164 aa12.88□□□□□ -0.35
CDKN1A-203ENST00000405375 F2Z2F3 143 aa12.88□□□□□ -0.35
CDKN1A-203ENST00000405375 NBR2O15453 112 aa12.88□□□□□ -0.35
CDKN1A-203ENST00000405375 NDUFA3O95167 84 aa12.88□□□□□ -0.35
CDKN1A-203ENST00000405375 IGKV1-17P01599 117 aa12.88□□□□□ -0.35
CDKN1A-203ENST00000405375 AMY1AP04745 511 aa12.88□□□□□ -0.35
CDKN1A-203ENST00000405375 PRTN3P24158 256 aa12.88□□□□□ -0.35
CDKN1A-203ENST00000405375 MRPL54Q6P161 138 aaKnown RBP12.88□□□□□ -0.35
CDKN1A-203ENST00000405375 NUDT10Q8NFP7 164 aa12.88□□□□□ -0.35
CDKN1A-203ENST00000405375 NPBQ8NG41 125 aa12.88□□□□□ -0.35
CDKN1A-203ENST00000405375 NUDT11Q96G61 164 aa12.88□□□□□ -0.35
CDKN1A-203ENST00000405375 HIGD1AQ9Y241 93 aa12.88□□□□□ -0.35
CDKN1A-203ENST00000405375 HILPDAQ9Y5L2 63 aa12.88□□□□□ -0.35
CDKN1A-203ENST00000405375 COL6A6A6NMZ7 2263 aa12.88□□□□□ -0.35
CDKN1A-203ENST00000405375 K7EIM0 57 aa12.87□□□□□ -0.35
CDKN1A-203ENST00000405375 PAFAH1B2P68402 229 aa12.87□□□□□ -0.35
CDKN1A-203ENST00000405375 KLRD1Q13241 179 aa12.87□□□□□ -0.35
CDKN1A-203ENST00000405375 SMIM12Q96EX1 92 aa12.87□□□□□ -0.35
CDKN1A-203ENST00000405375 CHD8Q9HCK8 2581 aa12.87□□□□□ -0.35
CDKN1A-203ENST00000405375 NCOR2Q9Y618 2525 aa12.87□□□□□ -0.35
CDKN1A-203ENST00000405375 A8MWP6 167 aa12.87□□□□□ -0.35
CDKN1A-203ENST00000405375 CNIH1O95406 144 aa12.87□□□□□ -0.35
CDKN1A-203ENST00000405375 HLA-DQA1P01909 254 aa12.87□□□□□ -0.35
CDKN1A-203ENST00000405375 CEACAM3P40198 252 aa12.87□□□□□ -0.35
CDKN1A-203ENST00000405375 ZNF600Q6ZNG1 722 aa12.87□□□□□ -0.35
CDKN1A-203ENST00000405375 C5orf17Q8NAS9 161 aa12.87□□□□□ -0.35
CDKN1A-203ENST00000405375 ATG101Q9BSB4 218 aa12.87□□□□□ -0.35
CDKN1A-203ENST00000405375 MLST8Q9BVC4 326 aa12.87□□□□□ -0.35
CDKN1A-203ENST00000405375 GNB4Q9HAV0 340 aa12.87□□□□□ -0.35
CDKN1A-203ENST00000405375 TPPP2P59282 170 aa12.86□□□□□ -0.35
CDKN1A-203ENST00000405375 LYZP61626 148 aa12.86□□□□□ -0.35
CDKN1A-203ENST00000405375 UBE2G1P62253 170 aa12.86□□□□□ -0.35
CDKN1A-203ENST00000405375 FBLN7Q53RD9 439 aa12.86□□□□□ -0.35
CDKN1A-203ENST00000405375 REC114Q7Z4M0 266 aa12.86□□□□□ -0.35
CDKN1A-203ENST00000405375 DTX2Q86UW9 622 aa12.86□□□□□ -0.35
CDKN1A-203ENST00000405375 BAGE3Q86Y29 109 aa12.86□□□□□ -0.35
CDKN1A-203ENST00000405375 LINC00469Q8N7U9 141 aa12.86□□□□□ -0.35
CDKN1A-203ENST00000405375 WIPF2Q8TF74 440 aaPredicted RBP12.86□□□□□ -0.35
CDKN1A-203ENST00000405375 IGFBPL1Q8WX77 278 aa12.86□□□□□ -0.35
CDKN1A-203ENST00000405375 GRAMD2BQ96HH9 432 aa12.86□□□□□ -0.35
CDKN1A-203ENST00000405375 NOL4LQ96MY1 436 aaPredicted RBP12.86□□□□□ -0.35
CDKN1A-203ENST00000405375 GPR82Q96P67 336 aa12.86□□□□□ -0.35
CDKN1A-203ENST00000405375 RASL11BQ9BPW5 248 aa12.86□□□□□ -0.35
CDKN1A-203ENST00000405375 SPTBN1Q01082 2364 aaKnown RBP12.86□□□□□ -0.35
CDKN1A-203ENST00000405375 Q6ZWC4 215 aa12.86□□□□□ -0.35
CDKN1A-203ENST00000405375 SLC25A39Q9BZJ4 359 aaPredicted RBP12.86□□□□□ -0.35
CDKN1A-203ENST00000405375 Q9H3A6 140 aa12.86□□□□□ -0.35
CDKN1A-203ENST00000405375 MRPL27Q9P0M9 148 aaKnown RBP12.86□□□□□ -0.35
CDKN1A-203ENST00000405375 TMEM14CQ9P0S9 112 aa12.86□□□□□ -0.35
CDKN1A-203ENST00000405375 BMPR1BO00238 502 aa12.85□□□□□ -0.35
CDKN1A-203ENST00000405375 CD24P25063 80 aa12.85□□□□□ -0.35
CDKN1A-203ENST00000405375 RASL11AQ6T310 242 aa12.85□□□□□ -0.35
CDKN1A-203ENST00000405375 SGK494Q96LW2 274 aa12.85□□□□□ -0.35
CDKN1A-203ENST00000405375 A0A1W2PPR1 153 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms