RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 CHRDL1Q9BU40 450 aa2.89□□□□□ -1.95
RTN4-208ENST00000404909 GNG13Q9P2W3 67 aa2.89□□□□□ -1.95
RTN4-208ENST00000404909 ANKRD34BA5PLL1 514 aa2.89□□□□□ -1.95
RTN4-208ENST00000404909 CYSRT1A8MQ03 144 aa2.89□□□□□ -1.95
RTN4-208ENST00000404909 PPP5D1E7EU14 171 aa2.89□□□□□ -1.95
RTN4-208ENST00000404909 I3L521 148 aa2.89□□□□□ -1.95
RTN4-208ENST00000404909 TSPAN9O75954 239 aa2.89□□□□□ -1.95
RTN4-208ENST00000404909 IL4P05112 153 aa2.89□□□□□ -1.95
RTN4-208ENST00000404909 SNRPCP09234 159 aaKnown RBP2.89□□□□□ -1.95
RTN4-208ENST00000404909 RAB9AP51151 201 aa2.89□□□□□ -1.95
RTN4-208ENST00000404909 RHOBP62745 196 aa2.89□□□□□ -1.95
RTN4-208ENST00000404909 SRSF3P84103 164 aaKnown RBP2.89□□□□□ -1.95
RTN4-208ENST00000404909 SRSF2Q01130 221 aaKnown RBP2.89□□□□□ -1.95
RTN4-208ENST00000404909 C19orf54Q5BKX5 351 aa2.89□□□□□ -1.95
RTN4-208ENST00000404909 TOR2AQ5JU69 321 aa2.89□□□□□ -1.95
RTN4-208ENST00000404909 C10orf113Q5VZT2 155 aa2.89□□□□□ -1.95
RTN4-208ENST00000404909 SPSB3Q6PJ21 355 aa2.89□□□□□ -1.95
RTN4-208ENST00000404909 MIR17HGQ75NE6 70 aa2.89□□□□□ -1.95
RTN4-208ENST00000404909 TMEM86BQ8N661 226 aa2.89□□□□□ -1.95
RTN4-208ENST00000404909 ZNF502Q8TBZ5 544 aa2.89□□□□□ -1.95
RTN4-208ENST00000404909 VN1R17PQ8TDU5 208 aa2.89□□□□□ -1.95
RTN4-208ENST00000404909 DNAJC4Q9NNZ3 241 aa2.89□□□□□ -1.95
RTN4-208ENST00000404909 TREM1Q9NP99 234 aa2.89□□□□□ -1.95
RTN4-208ENST00000404909 TMEM160Q9NX00 188 aa2.89□□□□□ -1.95
RTN4-208ENST00000404909 PSMB11A5LHX3 300 aa2.88□□□□□ -1.95
RTN4-208ENST00000404909 F8W735 103 aaPredicted RBP2.88□□□□□ -1.95
RTN4-208ENST00000404909 SCGB2A1O75556 95 aa2.88□□□□□ -1.95
RTN4-208ENST00000404909 HBE1P02100 147 aa2.88□□□□□ -1.95
RTN4-208ENST00000404909 FABP1P07148 127 aa2.88□□□□□ -1.95
RTN4-208ENST00000404909 CTSGP08311 255 aa2.88□□□□□ -1.95
RTN4-208ENST00000404909 ARL14EPLP0DKL9 152 aa2.88□□□□□ -1.95
RTN4-208ENST00000404909 CRIP2P52943 208 aaPredicted RBP2.88□□□□□ -1.95
RTN4-208ENST00000404909 CEBPGP53567 150 aa2.88□□□□□ -1.95
RTN4-208ENST00000404909 SLC35B1P78383 322 aa2.88□□□□□ -1.95
RTN4-208ENST00000404909 LEMD1Q68G75 181 aa2.88□□□□□ -1.95
RTN4-208ENST00000404909 LINC00305Q7Z4B0 112 aa2.88□□□□□ -1.95
RTN4-208ENST00000404909 OR51G1Q8NGK1 321 aa2.88□□□□□ -1.95
RTN4-208ENST00000404909 CCDC140Q96MF4 163 aa2.88□□□□□ -1.95
RTN4-208ENST00000404909 RARRES2Q99969 163 aa2.88□□□□□ -1.95
RTN4-208ENST00000404909 TRAV30A0A087WSZ9 112 aa2.88□□□□□ -1.95
RTN4-208ENST00000404909 TRBV7-1A0A0A6YYK4 115 aa2.88□□□□□ -1.95
RTN4-208ENST00000404909 TRAV5A0A0B4J249 113 aa2.88□□□□□ -1.95
RTN4-208ENST00000404909 FAM223BA6NKX1 122 aa2.88□□□□□ -1.95
RTN4-208ENST00000404909 OR7C2O60412 319 aa2.88□□□□□ -1.95
RTN4-208ENST00000404909 HYPMO75409 117 aa2.88□□□□□ -1.95
RTN4-208ENST00000404909 TRBV12-3P01733 135 aa2.88□□□□□ -1.95
RTN4-208ENST00000404909 RPLP1P05386 114 aaKnown RBP2.88□□□□□ -1.95
RTN4-208ENST00000404909 OR10J4P0C629 311 aa2.88□□□□□ -1.95
RTN4-208ENST00000404909 FOSL1P15407 271 aa2.88□□□□□ -1.95
RTN4-208ENST00000404909 ADMP35318 185 aa2.88□□□□□ -1.95
RTN4-208ENST00000404909 UBE2G2P60604 165 aa2.88□□□□□ -1.95
RTN4-208ENST00000404909 GUK1Q16774 197 aa2.88□□□□□ -1.95
RTN4-208ENST00000404909 SMUG1Q53HV7 270 aa2.88□□□□□ -1.95
RTN4-208ENST00000404909 KHDC1LQ5JSQ8 128 aa2.88□□□□□ -1.95
RTN4-208ENST00000404909 MORN5Q5VZ52 161 aa2.88□□□□□ -1.95
RTN4-208ENST00000404909 HIST2H2BDQ6DRA6 164 aa2.88□□□□□ -1.95
RTN4-208ENST00000404909 TEX38Q6PEX7 206 aa2.88□□□□□ -1.95
RTN4-208ENST00000404909 PATE2Q6UY27 113 aa2.88□□□□□ -1.95
RTN4-208ENST00000404909 IL34Q6ZMJ4 242 aa2.88□□□□□ -1.95
RTN4-208ENST00000404909 FAM223AQ8IWN6 122 aa2.88□□□□□ -1.95
RTN4-208ENST00000404909 OR1L4Q8NGR5 311 aa2.88□□□□□ -1.95
RTN4-208ENST00000404909 LYPD6BQ8NI32 183 aa2.88□□□□□ -1.95
RTN4-208ENST00000404909 Q8WTZ3 238 aa2.88□□□□□ -1.95
RTN4-208ENST00000404909 GATAD1Q8WUU5 269 aa2.88□□□□□ -1.95
RTN4-208ENST00000404909 MBD3L1Q8WWY6 194 aa2.88□□□□□ -1.95
RTN4-208ENST00000404909 PFDN5Q99471 154 aa2.88□□□□□ -1.95
RTN4-208ENST00000404909 FUT9Q9Y231 359 aa2.88□□□□□ -1.95
RTN4-208ENST00000404909 PUS1Q9Y606 427 aaKnown RBP eCLIP2.88□□□□□ -1.95
RTN4-208ENST00000404909 A0A0G2JLM5 398 aa2.88□□□□□ -1.95
RTN4-208ENST00000404909 SEC14L6B5MCN3 397 aa2.88□□□□□ -1.95
RTN4-208ENST00000404909 IGLV1-40P01703 118 aa2.88□□□□□ -1.95
RTN4-208ENST00000404909 HSPB1P04792 205 aaKnown RBP2.88□□□□□ -1.95
RTN4-208ENST00000404909 HILS1P60008 231 aa2.88□□□□□ -1.95
RTN4-208ENST00000404909 KIAA0141Q14154 515 aaPredicted RBP2.88□□□□□ -1.95
RTN4-208ENST00000404909 Q6ZSV7 163 aa2.88□□□□□ -1.95
RTN4-208ENST00000404909 C11orf44Q8N8P7 122 aa2.88□□□□□ -1.95
RTN4-208ENST00000404909 OR4X2Q8NGF9 303 aa2.88□□□□□ -1.95
RTN4-208ENST00000404909 RNF125Q96EQ8 232 aa2.88□□□□□ -1.95
RTN4-208ENST00000404909 USMG5Q96IX5 58 aa2.88□□□□□ -1.95
RTN4-208ENST00000404909 C20orf24Q9BUV8 137 aa2.88□□□□□ -1.95
RTN4-208ENST00000404909 MED9Q9NWA0 146 aa2.88□□□□□ -1.95
RTN4-208ENST00000404909 HIGD1AQ9Y241 93 aa2.88□□□□□ -1.95
RTN4-208ENST00000404909 NOTCH3Q9UM47 2321 aa2.87□□□□□ -1.95
RTN4-208ENST00000404909 ELOA3CA0A087WX78 387 aaPredicted RBP2.87□□□□□ -1.95
RTN4-208ENST00000404909 TRAV1-1A0A0B4J248 108 aa2.87□□□□□ -1.95
RTN4-208ENST00000404909 RAB19A4D1S5 217 aa2.87□□□□□ -1.95
RTN4-208ENST00000404909 RBFOX3A6NFN3 312 aa2.87□□□□□ -1.95
RTN4-208ENST00000404909 H3BUA1 57 aa2.87□□□□□ -1.95
RTN4-208ENST00000404909 TGOLN2O43493 480 aa2.87□□□□□ -1.95
RTN4-208ENST00000404909 CXorf1O96002 111 aa2.87□□□□□ -1.95
RTN4-208ENST00000404909 TOMM40O96008 361 aa2.87□□□□□ -1.95
RTN4-208ENST00000404909 IGHG4P01861 327 aa2.87□□□□□ -1.95
RTN4-208ENST00000404909 PSMB8P28062 276 aa2.87□□□□□ -1.95
RTN4-208ENST00000404909 FCGR2BP31994 310 aaPredicted RBP2.87□□□□□ -1.95
RTN4-208ENST00000404909 ARL3P36405 182 aa2.87□□□□□ -1.95
RTN4-208ENST00000404909 PPT1P50897 306 aa2.87□□□□□ -1.95
RTN4-208ENST00000404909 CFHR3Q02985 330 aa2.87□□□□□ -1.95
RTN4-208ENST00000404909 ARL6IP6Q8N6S5 226 aa2.87□□□□□ -1.95
RTN4-208ENST00000404909 ZNF491Q8N8L2 437 aa2.87□□□□□ -1.95
RTN4-208ENST00000404909 OR5AU1Q8NGC0 362 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms